RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 MAMDC2Q7Z304 686 aaPredicted RBP10.94□□□□□ -0.66
SYNE1-204ENST00000367248 PRICKLE2Q7Z3G6 844 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 ADOQ96SZ5 270 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 INPP5KQ9BT40 448 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 EPHX3Q9H6B9 360 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 VAPAQ9P0L0 249 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 PCDHB10Q9UN67 800 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 COLQQ9Y215 455 aaPredicted RBP10.94□□□□□ -0.66
SYNE1-204ENST00000367248 IGLV3-25P01717 112 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 H2BFMP0C1H6 154 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 GADD45AP24522 165 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 NRMQ8IXM6 262 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 FEVQ99581 238 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 CD93Q9NPY3 652 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 TMEM9BQ9NQ34 198 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 PCDHGB2Q9Y5G2 931 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 ENTPD6O75354 484 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 GABBR2O75899 941 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 TPOP07202 933 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 ZNF43P17038 809 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 MAGEA3P43357 314 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 TUBA4AP68366 448 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 SIRPAP78324 504 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 DMPKQ09013 629 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 LRIF1Q5T3J3 769 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 TRAPPC6BQ86SZ2 158 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 PLPP6Q8IY26 295 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 IFI44Q8TCB0 444 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 CDH20Q9HBT6 801 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 YBX2Q9Y2T7 364 aaKnown RBP10.93□□□□□ -0.66
SYNE1-204ENST00000367248 SCN7AQ01118 1682 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 GGT3PA6NGU5 568 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 ARGFXA6NJG6 315 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 H0YGG7 62 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 CLPXO76031 633 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 GPR75O95800 540 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 RETP07949 1114 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 S1PR1P21453 382 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 GPX3P22352 226 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 VASPP50552 380 aaPredicted RBP10.93□□□□□ -0.66
SYNE1-204ENST00000367248 ARF3P61204 181 aaPredicted RBP10.93□□□□□ -0.66
SYNE1-204ENST00000367248 MFSD13AQ14CX5 517 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 NINJ1Q92982 152 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 SLC6A16Q9GZN6 736 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 SLC6A14Q9UN76 642 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 SATB2Q9UPW6 733 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 GATBO75879 557 aaKnown RBP10.93□□□□□ -0.66
SYNE1-204ENST00000367248 TMEM41AQ96HV5 264 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 C3orf30Q96M34 536 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 CST11Q9H112 138 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 KLHL31Q9H511 634 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 RASAL1O95294 804 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 CD63P08962 238 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 IL9P15248 144 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 PITPNAQ00169 270 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 FCRLBQ6BAA4 426 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 CIDECQ96AQ7 238 aaPredicted RBP10.93□□□□□ -0.66
SYNE1-204ENST00000367248 PCDHGA7Q9Y5G6 932 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 FMO6PO60774 539 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 BNIP3Q12983 259 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 ARHGAP11AQ6P4F7 1023 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 DTWD1Q8N5C7 304 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 OR8S1Q8NH09 359 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 UBTD2Q8WUN7 234 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 PGAM5Q96HS1 289 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 SECISBP2Q96T21 854 aaKnown RBP10.93□□□□□ -0.66
SYNE1-204ENST00000367248 RNF6Q9Y252 685 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 HS3ST3A1Q9Y663 406 aa10.93□□□□□ -0.66
SYNE1-204ENST00000367248 A0A1W2PPK0 400 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 GABRR3A8MPY1 467 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 POU3F4P49335 361 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 ACTC1P68032 377 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 ACTA1P68133 377 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 PRAMEF8Q5VWM4 474 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 PRAMEF7Q5VXH5 474 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 IL17RCQ8NAC3 791 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 MROQ9BYG7 248 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 FGF22Q9HCT0 170 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 FGF21Q9NSA1 209 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 ADAM29Q9UKF5 820 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 HTR3EA5X5Y0 456 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 FESP07332 822 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 CBLBQ13191 982 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 C6orf141Q5SZD1 244 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 SBSNQ6UWP8 590 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 VASH1Q7L8A9 365 aaPredicted RBP10.92□□□□□ -0.66
SYNE1-204ENST00000367248 FOXRED2Q8IWF2 684 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 LUZP4Q9P127 313 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 SSC5DA1L4H1 1573 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 METTL21EPA6NDL7 271 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 PRRT4C9JH25 899 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 TNFRSF10CO14798 259 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 GSTT2BP0CG30 244 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 DCKP27707 260 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 MLC1Q15049 377 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 ULK3Q6PHR2 472 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 GRAMD2AQ8IUY3 354 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 METTL4Q8N3J2 472 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 MFSD9Q8NBP5 474 aa10.92□□□□□ -0.66
SYNE1-204ENST00000367248 CPNE2Q96FN4 548 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms