RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 CCDC28AQ8IWP9 274 aa9.21□□□□□ -0.94
CUX1-203ENST00000360264 ZNF619Q8N2I2 560 aa9.21□□□□□ -0.94
CUX1-203ENST00000360264 FAM156AQ8NDB6 213 aa9.21□□□□□ -0.94
CUX1-203ENST00000360264 ZNF160Q9HCG1 818 aa9.21□□□□□ -0.94
CUX1-203ENST00000360264 A0A1W2PQU0 124 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 PCDH17O14917 1159 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 STATHP02808 62 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 CSF1P09603 554 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 CD34P28906 385 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 OTX2P32243 289 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 PIAS4Q8N2W9 510 aaPredicted RBP9.2□□□□□ -0.94
CUX1-203ENST00000360264 SLC2A13Q96QE2 648 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 SLC35A3Q9Y2D2 325 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 RNGTTO60942 597 aaKnown RBP9.2□□□□□ -0.94
CUX1-203ENST00000360264 KIR2DS3Q14952 304 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 CCL14Q16627 93 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 GLYATL2Q8WU03 294 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 DNAJB11Q9UBS4 358 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 LTBP3Q9NS15 1303 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 BTBD16Q32M84 506 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 LRRC37A5PQ49AS3 106 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 SGPP2Q8IWX5 399 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 SLC6A5Q9Y345 797 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 MAFKO60675 156 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 WDR4P57081 412 aaKnown RBP9.2□□□□□ -0.94
CUX1-203ENST00000360264 DBPQ10586 325 aaPredicted RBP9.2□□□□□ -0.94
CUX1-203ENST00000360264 TPRA1Q86W33 373 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 TMEM151BQ8IW70 566 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 KLHDC8AQ8IYD2 350 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 CDRT4Q8N9R6 151 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 GATSQ8NAP1 163 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 HMX3A6NHT5 357 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 CNOT4O95628 575 aaKnown RBP9.2□□□□□ -0.94
CUX1-203ENST00000360264 SLC35F1Q5T1Q4 408 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 TMPRSS12Q86WS5 348 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 GALNT6Q8NCL4 622 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 TBC1D15Q8TC07 691 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 SNX18Q96RF0 628 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 KNDC1Q76NI1 1749 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 CCNJQ5T5M9 372 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 C14orf80Q86SX3 495 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 SLC35F2Q8IXU6 374 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 MARVELD2Q8N4S9 558 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 TVP23AA6NH52 213 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 ITGB7P26010 798 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 PITPNBP48739 271 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 SLC5A8Q8N695 610 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 OR4K1Q8NGD4 311 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 SORCS1Q8WY21 1168 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 ARL6Q9H0F7 186 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 FAIMQ9NVQ4 179 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 RBPJLQ9UBG7 517 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 CNOT11Q9UKZ1 510 aaKnown RBP9.2□□□□□ -0.94
CUX1-203ENST00000360264 HEPACAM2A8MVW5 462 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 CENPBD1B2RD01 187 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 RAB4AP20338 218 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 ADH7P40394 386 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 SOX2P48431 317 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 ACBD4Q8NC06 268 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 KCNA7Q96RP8 456 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 VRTNQ9H8Y1 702 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 GPN2Q9H9Y4 310 aaPredicted RBP9.2□□□□□ -0.94
CUX1-203ENST00000360264 ANKRD34BA5PLL1 514 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 SYN1P17600 705 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 CBLP22681 906 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 MTNR1AP48039 350 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 PCBD1P61457 104 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 GARNL3Q5VVW2 1013 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 FAM198BQ6UWH4 519 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 KDM1BQ8NB78 822 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 OR14A16Q8NHC5 309 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 ISG20Q96AZ6 181 aaKnown RBP9.2□□□□□ -0.94
CUX1-203ENST00000360264 PEAK1Q9H792 1746 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 SLC1A7O00341 560 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 CAMLGP49069 296 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 PPP5CP53041 499 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 TMPRSS9Q7Z410 1059 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 ZNF516Q92618 1163 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 CHD5Q8TDI0 1954 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 CUL9Q8IWT3 2517 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 OR5K3A6NET4 321 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 IGHG1P01857 330 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 GBAP04062 536 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 MSR1P21757 451 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 ETV6P41212 452 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 PHC2Q8IXK0 858 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 OR8K3Q8NH51 312 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 PKP2Q99959 881 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 APMAPQ9HDC9 416 aa9.2□□□□□ -0.94
CUX1-203ENST00000360264 B4DXG7 233 aa9.19□□□□□ -0.94
CUX1-203ENST00000360264 TBX10O75333 385 aa9.19□□□□□ -0.94
CUX1-203ENST00000360264 MAOAP21397 527 aa9.19□□□□□ -0.94
CUX1-203ENST00000360264 DNASE1P24855 282 aa9.19□□□□□ -0.94
CUX1-203ENST00000360264 EFNA3P52797 238 aa9.19□□□□□ -0.94
CUX1-203ENST00000360264 LRR1Q96L50 414 aa9.19□□□□□ -0.94
CUX1-203ENST00000360264 SGCZQ96LD1 299 aa9.19□□□□□ -0.94
CUX1-203ENST00000360264 CD207Q9UJ71 328 aa9.19□□□□□ -0.94
CUX1-203ENST00000360264 SRYQ05066 204 aa9.19□□□□□ -0.94
CUX1-203ENST00000360264 ZNF529Q6P280 563 aa9.19□□□□□ -0.94
CUX1-203ENST00000360264 C5orf46Q6UWT4 87 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms