RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 RTL4Q6ZR62 310 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 EIF3MQ7L2H7 374 aaKnown RBP7.56□□□□□ -1.2
HMGCR-202ENST00000343975 CHMP1BQ7LBR1 199 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 ARMC8Q8IUR7 673 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 OR2L13Q8N349 312 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 PTPMT1Q8WUK0 201 aaPredicted RBP7.56□□□□□ -1.2
HMGCR-202ENST00000343975 OMA1Q96E52 524 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 TPD52L3Q96J77 140 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 MTHFD2LQ9H903 347 aaPredicted RBP7.56□□□□□ -1.2
HMGCR-202ENST00000343975 POLE3Q9NRF9 147 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 UBQLN4Q9NRR5 601 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 LRFN1Q9P244 771 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 MYOTQ9UBF9 498 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 SAMD4AQ9UPU9 718 aaKnown RBP7.56□□□□□ -1.2
HMGCR-202ENST00000343975 A0A0G2JPF8 293 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 HNRNPCL2B2RXH8 293 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 HNRNPCL3B7ZW38 293 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 SCO2O43819 266 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 DBIP07108 87 aaKnown RBP7.56□□□□□ -1.2
HMGCR-202ENST00000343975 UMODP07911 640 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 HNRNPCL4P0DMR1 293 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 PSMA4P25789 261 aaKnown RBP7.56□□□□□ -1.2
HMGCR-202ENST00000343975 FBXW4P57775 412 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 RHDQ02161 417 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 PCOLCEQ15113 449 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 GTDC1Q4AE62 458 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 RUNDC3AQ59EK9 446 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 FCRLBQ6BAA4 426 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 LGI4Q8N135 537 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 NFKBIDQ8NI38 313 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 ZFP90Q8TF47 636 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 CDS1Q92903 461 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 SLC39A3Q9BRY0 314 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 UGT2B28Q9BY64 529 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 VAPAQ9P0L0 249 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 EYSQ5T1H1 3165 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 RP1L1Q8IWN7 2480 aaPredicted RBP7.56□□□□□ -1.2
HMGCR-202ENST00000343975 MED19A0JLT2 244 aaPredicted RBP7.56□□□□□ -1.2
HMGCR-202ENST00000343975 FOXL2P58012 376 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 EBPQ15125 230 aaKnown RBP7.56□□□□□ -1.2
HMGCR-202ENST00000343975 ZNF311Q5JNZ3 666 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 LRIF1Q5T3J3 769 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 ZNF517Q6ZMY9 492 aaPredicted RBP7.56□□□□□ -1.2
HMGCR-202ENST00000343975 RANBP3LQ86VV4 465 aaPredicted RBP7.56□□□□□ -1.2
HMGCR-202ENST00000343975 ZNF440Q8IYI8 595 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 GOT1L1Q8NHS2 421 aaPredicted RBP7.56□□□□□ -1.2
HMGCR-202ENST00000343975 WDR60Q8WVS4 1066 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 PMM1Q92871 262 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 TMBIM1Q969X1 311 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 REXO5Q96IC2 774 aaKnown RBP7.56□□□□□ -1.2
HMGCR-202ENST00000343975 NXF5Q9H1B4 397 aaKnown RBP7.56□□□□□ -1.2
HMGCR-202ENST00000343975 SACM1LQ9NTJ5 587 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 C6orf203Q9P0P8 240 aaPredicted RBP7.56□□□□□ -1.2
HMGCR-202ENST00000343975 AURKCQ9UQB9 309 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 RRP15Q9Y3B9 282 aaKnown RBP7.56□□□□□ -1.2
HMGCR-202ENST00000343975 PCDHGB7Q9Y5F8 929 aa7.56□□□□□ -1.2
HMGCR-202ENST00000343975 E2F6O75461 281 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 OR2J2O76002 312 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 CSTAP01040 98 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 F8A1P23610 371 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 BNIP1Q12981 228 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 TLR1Q15399 786 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 VMACQ2NL98 169 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 FAM98BQ52LJ0 330 aaKnown RBP7.55□□□□□ -1.2
HMGCR-202ENST00000343975 MTX3Q5HYI7 312 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 RABL3Q5HYI8 236 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 SAXO2Q658L1 398 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 GLYATQ6IB77 296 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 MISPQ8IVT2 679 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 CLEC4FQ8N1N0 589 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 SLC16A11Q8NCK7 471 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 C9orf43Q8TAL5 461 aaPredicted RBP7.55□□□□□ -1.2
HMGCR-202ENST00000343975 TTC9Q92623 222 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 EFHD2Q96C19 240 aaPredicted RBP7.55□□□□□ -1.2
HMGCR-202ENST00000343975 C16orf58Q96GQ5 468 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 NDEL1Q9GZM8 345 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 TMEM27Q9HBJ8 222 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 KRCC1Q9NPI7 259 aaPredicted RBP7.55□□□□□ -1.2
HMGCR-202ENST00000343975 SUCOQ9UBS9 1254 aaKnown RBP7.55□□□□□ -1.2
HMGCR-202ENST00000343975 DKKL1Q9UK85 242 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 A0A1W2PNU3 283 aaPredicted RBP7.55□□□□□ -1.2
HMGCR-202ENST00000343975 TLX3O43711 291 aaPredicted RBP7.55□□□□□ -1.2
HMGCR-202ENST00000343975 ITGA2P17301 1181 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 GCGRP47871 477 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 GSK3BP49841 420 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 ZNF41P51814 821 aaPredicted RBP7.55□□□□□ -1.2
HMGCR-202ENST00000343975 PNLIPRP2P54317 469 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 MPEG1Q2M385 716 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 LIN52Q52LA3 116 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 LRRC74BQ6ZQY2 392 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 ZNF550Q7Z398 422 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 ZNF619Q8N2I2 560 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 OR5D16Q8NGK9 328 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 TMEM234Q8WY98 164 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 UCN3Q969E3 161 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 SPACA9Q96E40 222 aaPredicted RBP7.55□□□□□ -1.2
HMGCR-202ENST00000343975 TMEM19Q96HH6 336 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 TRNT1Q96Q11 434 aaKnown RBP7.55□□□□□ -1.2
HMGCR-202ENST00000343975 PHF12Q96QT6 1004 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 PAIP1Q9H074 479 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms