RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 CCDC88CQ9P219 2028 aa17.65■□□□□ 0.42
PSPC1-201ENST00000338910 A0A1W2PQU0 124 aa17.65■□□□□ 0.42
PSPC1-201ENST00000338910 FEZF1A0PJY2 475 aa17.65■□□□□ 0.42
PSPC1-201ENST00000338910 ANHXE9PGG2 379 aa17.65■□□□□ 0.42
PSPC1-201ENST00000338910 H7BY64 318 aa17.65■□□□□ 0.42
PSPC1-201ENST00000338910 PLOD3O60568 738 aa17.65■□□□□ 0.42
PSPC1-201ENST00000338910 PDGFAP04085 211 aa17.65■□□□□ 0.42
PSPC1-201ENST00000338910 RPN2P04844 631 aa17.65■□□□□ 0.42
PSPC1-201ENST00000338910 ETV5P41161 510 aa17.65■□□□□ 0.42
PSPC1-201ENST00000338910 ETV1P50549 477 aa17.65■□□□□ 0.42
PSPC1-201ENST00000338910 LIM2P55344 173 aa17.65■□□□□ 0.42
PSPC1-201ENST00000338910 RPS25P62851 125 aaKnown RBP17.65■□□□□ 0.42
PSPC1-201ENST00000338910 MRPL28Q13084 256 aaKnown RBP17.65■□□□□ 0.42
PSPC1-201ENST00000338910 ZNF630Q2M218 657 aaPredicted RBP17.65■□□□□ 0.42
PSPC1-201ENST00000338910 FAM180BQ6P0A1 224 aa17.65■□□□□ 0.42
PSPC1-201ENST00000338910 METAP1DQ6UB28 335 aaPredicted RBP17.65■□□□□ 0.42
PSPC1-201ENST00000338910 CASP12Q6UXS9 341 aa17.65■□□□□ 0.42
PSPC1-201ENST00000338910 FAM92BQ6ZTR7 304 aa17.65■□□□□ 0.42
PSPC1-201ENST00000338910 OR52I1Q8NGK6 324 aa17.65■□□□□ 0.42
PSPC1-201ENST00000338910 TMEM163Q8TC26 289 aa17.65■□□□□ 0.42
PSPC1-201ENST00000338910 AKAP1Q92667 903 aaKnown RBP eCLIP17.65■□□□□ 0.42
PSPC1-201ENST00000338910 PRAP1Q96NZ9 151 aa17.65■□□□□ 0.42
PSPC1-201ENST00000338910 BHLHE41Q9C0J9 482 aaPredicted RBP17.65■□□□□ 0.42
PSPC1-201ENST00000338910 PHPT1Q9NRX4 125 aaPredicted RBP17.65■□□□□ 0.42
PSPC1-201ENST00000338910 MALT1Q9UDY8 824 aa17.65■□□□□ 0.42
PSPC1-201ENST00000338910 ATP6V1HQ9UI12 483 aa17.65■□□□□ 0.42
PSPC1-201ENST00000338910 RAB23Q9ULC3 237 aa17.65■□□□□ 0.42
PSPC1-201ENST00000338910 SF3B6Q9Y3B4 125 aaKnown RBP17.65■□□□□ 0.42
PSPC1-201ENST00000338910 STK25O00506 426 aa17.64■□□□□ 0.42
PSPC1-201ENST00000338910 PDPK1O15530 556 aa17.64■□□□□ 0.42
PSPC1-201ENST00000338910 SLC22A5O76082 557 aa17.64■□□□□ 0.42
PSPC1-201ENST00000338910 C6orf47O95873 294 aa17.64■□□□□ 0.42
PSPC1-201ENST00000338910 FURINP09958 794 aa17.64■□□□□ 0.42
PSPC1-201ENST00000338910 CAV3P56539 151 aa17.64■□□□□ 0.42
PSPC1-201ENST00000338910 RPS21P63220 83 aaKnown RBP17.64■□□□□ 0.42
PSPC1-201ENST00000338910 PUM1Q14671 1186 aaKnown RBP eCLIP17.64■□□□□ 0.423e-6■□□□□ 9.9
PSPC1-201ENST00000338910 HEPACAMQ14CZ8 416 aa17.64■□□□□ 0.42
PSPC1-201ENST00000338910 SEC23BQ15437 767 aa17.64■□□□□ 0.42
PSPC1-201ENST00000338910 LAPTM4BQ86VI4 370 aa17.64■□□□□ 0.42
PSPC1-201ENST00000338910 MMP21Q8N119 569 aa17.64■□□□□ 0.42
PSPC1-201ENST00000338910 LRRC20Q8TCA0 184 aa17.64■□□□□ 0.42
PSPC1-201ENST00000338910 PPCDCQ96CD2 204 aa17.64■□□□□ 0.42
PSPC1-201ENST00000338910 C12orf66Q96MD2 445 aa17.64■□□□□ 0.42
PSPC1-201ENST00000338910 GPR137Q96N19 417 aa17.64■□□□□ 0.42
PSPC1-201ENST00000338910 INSM2Q96T92 566 aaPredicted RBP17.64■□□□□ 0.42
PSPC1-201ENST00000338910 MENTQ9BUN1 341 aa17.64■□□□□ 0.42
PSPC1-201ENST00000338910 CDH10Q9Y6N8 788 aa17.64■□□□□ 0.42
PSPC1-201ENST00000338910 LOC102723532A0A0G2JNH3 316 aa17.64■□□□□ 0.41
PSPC1-201ENST00000338910 A0A1W2PQF6 199 aa17.64■□□□□ 0.41
PSPC1-201ENST00000338910 ANKDD1BA6NHY2 528 aa17.64■□□□□ 0.41
PSPC1-201ENST00000338910 COL9A1P20849 921 aa17.64■□□□□ 0.41
PSPC1-201ENST00000338910 GSTM5P46439 218 aa17.64■□□□□ 0.41
PSPC1-201ENST00000338910 XKP51811 444 aa17.64■□□□□ 0.41
PSPC1-201ENST00000338910 PER3P56645 1201 aa17.64■□□□□ 0.41
PSPC1-201ENST00000338910 SF3A2Q15428 464 aaKnown RBP17.64■□□□□ 0.41
PSPC1-201ENST00000338910 PRSS53Q2L4Q9 553 aa17.64■□□□□ 0.41
PSPC1-201ENST00000338910 TRIM40Q6P9F5 258 aa17.64■□□□□ 0.41
PSPC1-201ENST00000338910 QSOX2Q6ZRP7 698 aa17.64■□□□□ 0.41
PSPC1-201ENST00000338910 ANKRD53Q8N9V6 530 aa17.64■□□□□ 0.41
PSPC1-201ENST00000338910 SLC37A3Q8NCC5 494 aa17.64■□□□□ 0.41
PSPC1-201ENST00000338910 APOBEC4Q8WW27 367 aaKnown RBP17.64■□□□□ 0.41
PSPC1-201ENST00000338910 C1GALT1C1Q96EU7 318 aa17.64■□□□□ 0.41
PSPC1-201ENST00000338910 CCDC120Q96HB5 630 aa17.64■□□□□ 0.41
PSPC1-201ENST00000338910 GABRG3Q99928 467 aa17.64■□□□□ 0.41
PSPC1-201ENST00000338910 C1QTNF2Q9BXJ5 285 aa17.64■□□□□ 0.41
PSPC1-201ENST00000338910 SLC17A9Q9BYT1 436 aa17.64■□□□□ 0.41
PSPC1-201ENST00000338910 XKR8Q9H6D3 395 aa17.64■□□□□ 0.41
PSPC1-201ENST00000338910 IMP3Q9NV31 184 aaKnown RBP17.64■□□□□ 0.41
PSPC1-201ENST00000338910 MTCH2Q9Y6C9 303 aa17.64■□□□□ 0.41
PSPC1-201ENST00000338910 NINQ8N4C6 2090 aa17.64■□□□□ 0.41
PSPC1-201ENST00000338910 TBC1D3DA0A087WVF3 549 aa17.63■□□□□ 0.41
PSPC1-201ENST00000338910 TBC1D3IA0A087WXS9 549 aa17.63■□□□□ 0.41
PSPC1-201ENST00000338910 TBC1D3EA0A087X179 549 aa17.63■□□□□ 0.41
PSPC1-201ENST00000338910 TBC1D3KA0A087X1G2 549 aa17.63■□□□□ 0.41
PSPC1-201ENST00000338910 TBC1D3FA6NER0 549 aaPredicted RBP17.63■□□□□ 0.41
PSPC1-201ENST00000338910 TBC1D3LB9A6J9 549 aa17.63■□□□□ 0.41
PSPC1-201ENST00000338910 INMT-MINDY4F8WBC2 141 aa17.63■□□□□ 0.41
PSPC1-201ENST00000338910 H3BN98 237 aa17.63■□□□□ 0.41
PSPC1-201ENST00000338910 RTCAO00442 366 aaKnown RBP17.63■□□□□ 0.41
PSPC1-201ENST00000338910 LRRTM2O43300 516 aa17.63■□□□□ 0.41
PSPC1-201ENST00000338910 HPGDSO60760 199 aa17.63■□□□□ 0.41
PSPC1-201ENST00000338910 RFPL3O75679 317 aa17.63■□□□□ 0.41
PSPC1-201ENST00000338910 SCO1O75880 301 aa17.63■□□□□ 0.41
PSPC1-201ENST00000338910 RAB36O95755 333 aa17.63■□□□□ 0.41
PSPC1-201ENST00000338910 TBC1D3HP0C7X1 549 aa17.63■□□□□ 0.41
PSPC1-201ENST00000338910 ARAFP10398 606 aa17.63■□□□□ 0.41
PSPC1-201ENST00000338910 TAGLNQ01995 201 aaKnown RBP17.63■□□□□ 0.41
PSPC1-201ENST00000338910 IKZF1Q13422 519 aa17.63■□□□□ 0.41
PSPC1-201ENST00000338910 RIN1Q13671 783 aa17.63■□□□□ 0.41
PSPC1-201ENST00000338910 ARHGAP19Q14CB8 494 aa17.63■□□□□ 0.41
PSPC1-201ENST00000338910 AGERQ15109 404 aa17.63■□□□□ 0.41
PSPC1-201ENST00000338910 ANGPT1Q15389 498 aa17.63■□□□□ 0.41
PSPC1-201ENST00000338910 SLC5A12Q1EHB4 618 aa17.63■□□□□ 0.41
PSPC1-201ENST00000338910 MPEG1Q2M385 716 aa17.63■□□□□ 0.41
PSPC1-201ENST00000338910 TBC1D3GQ6DHY5 549 aa17.63■□□□□ 0.41
PSPC1-201ENST00000338910 TBC1D3CQ6IPX1 549 aa17.63■□□□□ 0.41
PSPC1-201ENST00000338910 TBC1D3Q8IZP1 549 aaPredicted RBP17.63■□□□□ 0.41
PSPC1-201ENST00000338910 TM9SF4Q92544 642 aa17.63■□□□□ 0.41
PSPC1-201ENST00000338910 CXorf40BQ96DE9 158 aa17.63■□□□□ 0.41
PSPC1-201ENST00000338910 F2RL3Q96RI0 385 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms