RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 FAM71E1Q6IPT2 247 aa16.48■□□□□ 0.23
RAB28-202ENST00000330852 IKBIPQ70UQ0 350 aa16.48■□□□□ 0.23
RAB28-202ENST00000330852 LARP4Q71RC2 724 aaKnown RBP eCLIP16.48■□□□□ 0.236e-6■■■■■ 31
RAB28-202ENST00000330852 IFNEQ86WN2 208 aa16.48■□□□□ 0.23
RAB28-202ENST00000330852 NINJ1Q92982 152 aa16.48■□□□□ 0.23
RAB28-202ENST00000330852 EBPLQ9BY08 206 aa16.48■□□□□ 0.23
RAB28-202ENST00000330852 DNAJB12Q9NXW2 375 aaKnown RBP16.48■□□□□ 0.23
RAB28-202ENST00000330852 C2orf72A6NCS6 295 aa16.47■□□□□ 0.23
RAB28-202ENST00000330852 TTC36A6NLP5 189 aa16.47■□□□□ 0.23
RAB28-202ENST00000330852 PLIN3O60664 434 aa16.47■□□□□ 0.23
RAB28-202ENST00000330852 CHMP24386 653 aa16.47■□□□□ 0.23
RAB28-202ENST00000330852 CORO7P57737 925 aa16.47■□□□□ 0.23
RAB28-202ENST00000330852 DCST1Q5T197 706 aa16.47■□□□□ 0.23
RAB28-202ENST00000330852 FAM219BQ5XKK7 198 aa16.47■□□□□ 0.23
RAB28-202ENST00000330852 SLC44A2Q8IWA5 706 aaPredicted RBP16.47■□□□□ 0.23
RAB28-202ENST00000330852 TRIM42Q8IWZ5 723 aa16.47■□□□□ 0.23
RAB28-202ENST00000330852 ZZZ3Q8IYH5 903 aa16.47■□□□□ 0.23
RAB28-202ENST00000330852 OR7G2Q8NG99 324 aa16.47■□□□□ 0.23
RAB28-202ENST00000330852 ACBD3Q9H3P7 528 aa16.47■□□□□ 0.23
RAB28-202ENST00000330852 ANKRA2Q9H9E1 313 aa16.47■□□□□ 0.23
RAB28-202ENST00000330852 OXSMQ9NWU1 459 aa16.47■□□□□ 0.23
RAB28-202ENST00000330852 TAS2R10Q9NYW0 307 aa16.47■□□□□ 0.23
RAB28-202ENST00000330852 MID2Q9UJV3 735 aa16.47■□□□□ 0.23
RAB28-202ENST00000330852 C19orf53Q9UNZ5 99 aaPredicted RBP16.47■□□□□ 0.23
RAB28-202ENST00000330852 OR10H1Q9Y4A9 318 aa16.47■□□□□ 0.23
RAB28-202ENST00000330852 NPIPB8E9PQR5 432 aa16.46■□□□□ 0.23
RAB28-202ENST00000330852 UROSP10746 265 aa16.46■□□□□ 0.23
RAB28-202ENST00000330852 PRPH2P23942 346 aa16.46■□□□□ 0.23
RAB28-202ENST00000330852 DNAJA1P31689 397 aaKnown RBP16.46■□□□□ 0.23
RAB28-202ENST00000330852 FOXA1P55317 472 aa16.46■□□□□ 0.23
RAB28-202ENST00000330852 GFRA1P56159 465 aa16.46■□□□□ 0.23
RAB28-202ENST00000330852 SORDQ00796 357 aa16.46■□□□□ 0.23
RAB28-202ENST00000330852 AKAP6Q13023 2319 aa16.46■□□□□ 0.23
RAB28-202ENST00000330852 DAZAP2Q15038 168 aaPredicted RBP16.46■□□□□ 0.23
RAB28-202ENST00000330852 NPSR1Q6W5P4 371 aa16.46■□□□□ 0.23
RAB28-202ENST00000330852 ADGRE4PQ86SQ3 457 aa16.46■□□□□ 0.23
RAB28-202ENST00000330852 WNT2BQ93097 391 aa16.46■□□□□ 0.23
RAB28-202ENST00000330852 POLDIP3Q9BY77 421 aaKnown RBP16.46■□□□□ 0.23
RAB28-202ENST00000330852 SDHAF3Q9NRP4 125 aa16.46■□□□□ 0.23
RAB28-202ENST00000330852 CRIM1Q9NZV1 1036 aa16.46■□□□□ 0.23
RAB28-202ENST00000330852 JKAMPQ9P055 326 aa16.46■□□□□ 0.23
RAB28-202ENST00000330852 MRTO4Q9UKD2 239 aaKnown RBP16.46■□□□□ 0.23
RAB28-202ENST00000330852 AKAP9Q99996 3911 aa16.46■□□□□ 0.23
RAB28-202ENST00000330852 KDM4EB2RXH2 506 aaPredicted RBP16.45■□□□□ 0.22
RAB28-202ENST00000330852 RCBTB2O95199 551 aa16.45■□□□□ 0.22
RAB28-202ENST00000330852 GOSR1O95249 250 aa16.45■□□□□ 0.22
RAB28-202ENST00000330852 CPA3P15088 417 aa16.45■□□□□ 0.22
RAB28-202ENST00000330852 NTSP30990 170 aa16.45■□□□□ 0.22
RAB28-202ENST00000330852 NCBP2P52298 156 aaKnown RBP eCLIP16.45■□□□□ 0.22
RAB28-202ENST00000330852 WNT3P56703 355 aa16.45■□□□□ 0.22
RAB28-202ENST00000330852 RIPPLY3P57055 190 aa16.45■□□□□ 0.22
RAB28-202ENST00000330852 PSG6Q00889 435 aa16.45■□□□□ 0.22
RAB28-202ENST00000330852 BCL2A1Q16548 175 aa16.45■□□□□ 0.22
RAB28-202ENST00000330852 NOXRED1Q6NXP6 359 aa16.45■□□□□ 0.22
RAB28-202ENST00000330852 ZNF764Q96H86 408 aaPredicted RBP16.45■□□□□ 0.22
RAB28-202ENST00000330852 SFXN3Q9BWM7 321 aa16.45■□□□□ 0.22
RAB28-202ENST00000330852 RASSF1Q9NS23 344 aa16.45■□□□□ 0.22
RAB28-202ENST00000330852 ABCG2Q9UNQ0 655 aa16.45■□□□□ 0.22
RAB28-202ENST00000330852 H0Y3Z8 333 aa16.45■□□□□ 0.22
RAB28-202ENST00000330852 COPEO14579 308 aa16.45■□□□□ 0.22
RAB28-202ENST00000330852 JUNP05412 331 aaKnown RBP16.45■□□□□ 0.22
RAB28-202ENST00000330852 TMIGD3P0DMS9 266 aaPredicted RBP16.45■□□□□ 0.22
RAB28-202ENST00000330852 GRK2P25098 689 aa16.45■□□□□ 0.22
RAB28-202ENST00000330852 DGKQP52824 942 aa16.45■□□□□ 0.22
RAB28-202ENST00000330852 GAS1P54826 345 aa16.45■□□□□ 0.22
RAB28-202ENST00000330852 GAB1Q13480 694 aa16.45■□□□□ 0.22
RAB28-202ENST00000330852 LIPMQ5VYY2 423 aa16.45■□□□□ 0.22
RAB28-202ENST00000330852 RNF165Q6ZSG1 346 aa16.45■□□□□ 0.22
RAB28-202ENST00000330852 LRRN4CLQ8ND94 238 aa16.45■□□□□ 0.22
RAB28-202ENST00000330852 UBLCP1Q8WVY7 318 aaPredicted RBP16.45■□□□□ 0.22
RAB28-202ENST00000330852 TUBA1CQ9BQE3 449 aa16.45■□□□□ 0.22
RAB28-202ENST00000330852 TRMOQ9BU70 441 aa16.45■□□□□ 0.22
RAB28-202ENST00000330852 A6NNC1 897 aa16.44■□□□□ 0.22
RAB28-202ENST00000330852 SLC28A1O00337 649 aa16.44■□□□□ 0.22
RAB28-202ENST00000330852 PSMG1O95456 288 aa16.44■□□□□ 0.22
RAB28-202ENST00000330852 PSMD4P55036 377 aaKnown RBP16.44■□□□□ 0.22
RAB28-202ENST00000330852 DSCR4P56555 118 aaPredicted RBP16.44■□□□□ 0.22
RAB28-202ENST00000330852 ZNF155Q12901 538 aaPredicted RBP16.44■□□□□ 0.22
RAB28-202ENST00000330852 ZNHIT3Q15649 155 aaPredicted RBP16.44■□□□□ 0.22
RAB28-202ENST00000330852 DECR1Q16698 335 aa16.44■□□□□ 0.22
RAB28-202ENST00000330852 OR2L13Q8N349 312 aa16.44■□□□□ 0.22
RAB28-202ENST00000330852 CCDC63Q8NA47 563 aa16.44■□□□□ 0.22
RAB28-202ENST00000330852 C9orf106Q8NAJ2 232 aa16.44■□□□□ 0.22
RAB28-202ENST00000330852 CDC26Q8NHZ8 85 aa16.44■□□□□ 0.22
RAB28-202ENST00000330852 SFXN2Q96NB2 322 aa16.44■□□□□ 0.22
RAB28-202ENST00000330852 AMDHD1Q96NU7 426 aa16.44■□□□□ 0.22
RAB28-202ENST00000330852 IQCGQ9H095 443 aaKnown RBP16.44■□□□□ 0.22
RAB28-202ENST00000330852 CLEC4MQ9H2X3 399 aaPredicted RBP16.44■□□□□ 0.22
RAB28-202ENST00000330852 GLIPR2Q9H4G4 154 aa16.44■□□□□ 0.22
RAB28-202ENST00000330852 C3orf14Q9HBI5 128 aa16.44■□□□□ 0.22
RAB28-202ENST00000330852 HHATLQ9HCP6 504 aa16.44■□□□□ 0.22
RAB28-202ENST00000330852 DKKL1Q9UK85 242 aa16.44■□□□□ 0.22
RAB28-202ENST00000330852 CCL27Q9Y4X3 112 aa16.44■□□□□ 0.22
RAB28-202ENST00000330852 PCNX3Q9H6A9 2034 aa16.44■□□□□ 0.22
RAB28-202ENST00000330852 ABCA4P78363 2273 aa16.44■□□□□ 0.22
RAB28-202ENST00000330852 TUBAL3A6NHL2 446 aa16.43■□□□□ 0.22
RAB28-202ENST00000330852 LINC01387J3KSC0 135 aa16.43■□□□□ 0.22
RAB28-202ENST00000330852 SHBGP04278 402 aa16.43■□□□□ 0.22
RAB28-202ENST00000330852 EPXP11678 715 aa16.43■□□□□ 0.22
RAB28-202ENST00000330852 ZNF708P17019 499 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms