RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 OR4D1Q15615 310 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 TRAM1Q15629 374 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 ARHGAP15Q53QZ3 475 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 C6orf136Q5SQH8 315 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 MEDAGQ5VYS4 303 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 CPZQ66K79 652 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 CLEC6AQ6EIG7 209 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 HEPHL1Q6MZM0 1159 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 CFAP161Q6P656 301 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 DNAJB7Q7Z6W7 309 aaPredicted RBP6.28□□□□□ -1.4
ZNF540-201ENST00000316433 PLEKHH3Q7Z736 793 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 MISPQ8IVT2 679 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 GPR65Q8IYL9 337 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 CLDN22Q8N7P3 220 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 OR5J2Q8NH18 312 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 TRAPPC12Q8WVT3 735 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 GCDHQ92947 438 aaPredicted RBP6.28□□□□□ -1.4
ZNF540-201ENST00000316433 DDOQ99489 341 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 SOSTQ9BQB4 213 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 ADAT1Q9BUB4 502 aaKnown RBP6.28□□□□□ -1.4
ZNF540-201ENST00000316433 PRDM13Q9H4Q3 707 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 NUDT15Q9NV35 164 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 GPR83Q9NYM4 423 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 PLEKHB1Q9UF11 243 aaPredicted RBP6.28□□□□□ -1.4
ZNF540-201ENST00000316433 SH3BGRL2Q9UJC5 107 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 CORO2BQ9UQ03 480 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 PLEKHM1Q9Y4G2 1056 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 HS3ST4Q9Y661 456 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 LOC105369274A0A096LPK9 316 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 ANKRD61A6NGH8 418 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 MYO1GB0I1T2 1018 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 M0QZ92 97 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 SEMA7AO75326 666 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 OR4F21O95013 312 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 CDRT1O95170 752 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 OTCP00480 354 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 F11P03951 625 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 OR8U8P0C7N1 319 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 EBLN1P0CF75 366 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 ELNP15502 786 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 ZNF44P15621 663 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 SMPD1P17405 629 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 CST5P28325 142 aaPredicted RBP6.27□□□□□ -1.41
ZNF540-201ENST00000316433 SDC2P34741 201 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 CCR6P51684 374 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 ADPRHP54922 357 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 NHLH2Q02577 135 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 IL18Q14116 193 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 USF2Q15853 346 aaPredicted RBP6.27□□□□□ -1.41
ZNF540-201ENST00000316433 ZNF648Q5T619 568 aaPredicted RBP6.27□□□□□ -1.41
ZNF540-201ENST00000316433 OR4F3Q6IEY1 312 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 CNIH2Q6PI25 160 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 METAP1DQ6UB28 335 aaPredicted RBP6.27□□□□□ -1.41
ZNF540-201ENST00000316433 UNQ6494/PRO21346Q6UXR6 183 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 GPRIN1Q7Z2K8 1008 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 FAM122BQ7Z309 247 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 SCD5Q86SK9 330 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 OR4N4Q8N0Y3 316 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 BEST4Q8NFU0 473 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 SPATA22Q8NHS9 363 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 BARD1Q99728 777 aaKnown RBP6.27□□□□□ -1.41
ZNF540-201ENST00000316433 TOLLIPQ9H0E2 274 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 METTL17Q9H7H0 456 aaPredicted RBP6.27□□□□□ -1.41
ZNF540-201ENST00000316433 ISYNA1Q9NPH2 558 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 SEMA3GQ9NS98 782 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 CNOT2Q9NZN8 540 aaKnown RBP6.27□□□□□ -1.41
ZNF540-201ENST00000316433 SLAMF8Q9P0V8 285 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 ZNF225Q9UK10 706 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 PLSCR5A0PG75 271 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 TMEM210A6NLX4 147 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 PPIHO43447 177 aaKnown RBP6.27□□□□□ -1.41
ZNF540-201ENST00000316433 TBX19O60806 448 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 IL1AP01583 271 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 IGHV2-5P01817 119 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 VTNP04004 478 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 GABRA1P14867 456 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 SAT1P21673 171 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 ITGB7P26010 798 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 PSEN2P49810 448 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 PPT1P50897 306 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 PPP3R1P63098 170 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 MRPS6P82932 125 aaKnown RBP6.27□□□□□ -1.41
ZNF540-201ENST00000316433 TNFRSF9Q07011 255 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 ST3GAL4Q11206 333 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 LAPTM4AQ15012 233 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 DHCR24Q15392 516 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 OR8G1Q15617 311 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 SLC35D3Q5M8T2 416 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 TMEM201Q5SNT2 666 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 ZNF561Q8N587 486 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 PTGR2Q8N8N7 351 aaPredicted RBP6.27□□□□□ -1.41
ZNF540-201ENST00000316433 OR4L1Q8NH43 312 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 ZNF558Q96NG5 402 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 ASB16Q96NS5 453 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 CASD1Q96PB1 797 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 INPP5KQ9BT40 448 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 FSD1LQ9BXM9 530 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 NSUN3Q9H649 340 aaKnown RBP6.27□□□□□ -1.41
ZNF540-201ENST00000316433 SLC6A20Q9NP91 592 aa6.27□□□□□ -1.41
ZNF540-201ENST00000316433 FZD3Q9NPG1 666 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms