RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 DTX4Q9Y2E6 619 aa14.98□□□□□ -0.01
TUBB3-201ENST00000315491 KCNE3Q9Y6H6 103 aa14.98□□□□□ -0.01
TUBB3-201ENST00000315491 IGHV1-45A0A0A0MS14 117 aa14.97□□□□□ -0.01
TUBB3-201ENST00000315491 CXCR6O00574 342 aa14.97□□□□□ -0.01
TUBB3-201ENST00000315491 SOCS6O14544 535 aa14.97□□□□□ -0.01
TUBB3-201ENST00000315491 GMNNO75496 209 aa14.97□□□□□ -0.01
TUBB3-201ENST00000315491 TFPTP0C1Z6 253 aa14.97□□□□□ -0.01
TUBB3-201ENST00000315491 COX6A1P12074 109 aa14.97□□□□□ -0.01
TUBB3-201ENST00000315491 SPINK2P20155 84 aa14.97□□□□□ -0.01
TUBB3-201ENST00000315491 PLA2G5P39877 138 aa14.97□□□□□ -0.01
TUBB3-201ENST00000315491 SLC26A5P58743 744 aa14.97□□□□□ -0.01
TUBB3-201ENST00000315491 SCARB2Q14108 478 aa14.97□□□□□ -0.01
TUBB3-201ENST00000315491 VEZF1Q14119 521 aa14.97□□□□□ -0.01
TUBB3-201ENST00000315491 FLOT2Q14254 428 aa14.97□□□□□ -0.01
TUBB3-201ENST00000315491 TGIF1Q15583 401 aa14.97□□□□□ -0.01
TUBB3-201ENST00000315491 ZNHIT3Q15649 155 aaPredicted RBP14.97□□□□□ -0.01
TUBB3-201ENST00000315491 KIRREL2Q6UWL6 708 aa14.97□□□□□ -0.01
TUBB3-201ENST00000315491 PPP1R32Q7Z5V6 425 aa14.97□□□□□ -0.01
TUBB3-201ENST00000315491 DHFR2Q86XF0 187 aa14.97□□□□□ -0.01
TUBB3-201ENST00000315491 SLC44A2Q8IWA5 706 aaPredicted RBP14.97□□□□□ -0.01
TUBB3-201ENST00000315491 NFKBIDQ8NI38 313 aa14.97□□□□□ -0.01
TUBB3-201ENST00000315491 FIG4Q92562 907 aa14.97□□□□□ -0.01
TUBB3-201ENST00000315491 KIAA1143Q96AT1 154 aaPredicted RBP14.97□□□□□ -0.01
TUBB3-201ENST00000315491 SCNM1Q9BWG6 230 aa14.97□□□□□ -0.01
TUBB3-201ENST00000315491 ITPAQ9BY32 194 aa14.97□□□□□ -0.01
TUBB3-201ENST00000315491 Q9H521 79 aa14.97□□□□□ -0.01
TUBB3-201ENST00000315491 ZNF696Q9H7X3 374 aa14.97□□□□□ -0.01
TUBB3-201ENST00000315491 DUSP22Q9NRW4 184 aa14.97□□□□□ -0.01
TUBB3-201ENST00000315491 EXD2Q9NVH0 621 aa14.97□□□□□ -0.01
TUBB3-201ENST00000315491 GIN1Q9NXP7 522 aa14.97□□□□□ -0.01
TUBB3-201ENST00000315491 MRPS18BQ9Y676 258 aaKnown RBP14.97□□□□□ -0.01
TUBB3-201ENST00000315491 CCDC88CQ9P219 2028 aa14.97□□□□□ -0.01
TUBB3-201ENST00000315491 A0A1W2PQ72 361 aa14.96□□□□□ -0.01
TUBB3-201ENST00000315491 PRAMEF27A3QJZ7 478 aa14.96□□□□□ -0.01
TUBB3-201ENST00000315491 TMEM247A6NEH6 219 aa14.96□□□□□ -0.01
TUBB3-201ENST00000315491 OR6C76A6NM76 312 aa14.96□□□□□ -0.01
TUBB3-201ENST00000315491 NKX2-2O95096 273 aa14.96□□□□□ -0.01
TUBB3-201ENST00000315491 TFAP2AP05549 437 aa14.96□□□□□ -0.01
TUBB3-201ENST00000315491 BCHEP06276 602 aa14.96□□□□□ -0.01
TUBB3-201ENST00000315491 ATP6V1B2P21281 511 aa14.96□□□□□ -0.01
TUBB3-201ENST00000315491 PSG6Q00889 435 aa14.96□□□□□ -0.01
TUBB3-201ENST00000315491 CCNIQ14094 377 aa14.96□□□□□ -0.01
TUBB3-201ENST00000315491 ATAD3BQ5T9A4 648 aa14.96□□□□□ -0.01
TUBB3-201ENST00000315491 OGFRL1Q5TC84 451 aaPredicted RBP14.96□□□□□ -0.01
TUBB3-201ENST00000315491 LCN8Q6JVE9 175 aa14.96□□□□□ -0.01
TUBB3-201ENST00000315491 SLC30A8Q8IWU4 369 aa14.96□□□□□ -0.01
TUBB3-201ENST00000315491 ICA1LQ8NDH6 482 aa14.96□□□□□ -0.01
TUBB3-201ENST00000315491 HIPK4Q8NE63 616 aa14.96□□□□□ -0.01
TUBB3-201ENST00000315491 SLC38A5Q8WUX1 472 aa14.96□□□□□ -0.01
TUBB3-201ENST00000315491 CDS1Q92903 461 aa14.96□□□□□ -0.01
TUBB3-201ENST00000315491 NACC2Q96BF6 587 aa14.96□□□□□ -0.01
TUBB3-201ENST00000315491 VMP1Q96GC9 406 aa14.96□□□□□ -0.01
TUBB3-201ENST00000315491 TMEM19Q96HH6 336 aa14.96□□□□□ -0.01
TUBB3-201ENST00000315491 SEMA4CQ9C0C4 833 aa14.96□□□□□ -0.01
TUBB3-201ENST00000315491 GPN2Q9H9Y4 310 aaPredicted RBP14.96□□□□□ -0.01
TUBB3-201ENST00000315491 IL17BQ9UHF5 180 aa14.96□□□□□ -0.01
TUBB3-201ENST00000315491 WASF3Q9UPY6 502 aa14.96□□□□□ -0.01
TUBB3-201ENST00000315491 ANGPT4Q9Y264 503 aa14.96□□□□□ -0.01
TUBB3-201ENST00000315491 C5orf58C9J3I9 102 aa14.96□□□□□ -0.02
TUBB3-201ENST00000315491 SLC28A2O43868 658 aa14.96□□□□□ -0.02
TUBB3-201ENST00000315491 SOX30O94993 753 aa14.96□□□□□ -0.02
TUBB3-201ENST00000315491 NR2F1P10589 423 aa14.96□□□□□ -0.02
TUBB3-201ENST00000315491 GABRA3P34903 492 aa14.96□□□□□ -0.02
TUBB3-201ENST00000315491 FUT5Q11128 374 aa14.96□□□□□ -0.02
TUBB3-201ENST00000315491 MAPK11Q15759 364 aa14.96□□□□□ -0.02
TUBB3-201ENST00000315491 LPCAT4Q643R3 524 aa14.96□□□□□ -0.02
TUBB3-201ENST00000315491 HEPHL1Q6MZM0 1159 aa14.96□□□□□ -0.02
TUBB3-201ENST00000315491 CYP2R1Q6VVX0 501 aa14.96□□□□□ -0.02
TUBB3-201ENST00000315491 SLC29A4Q7RTT9 530 aa14.96□□□□□ -0.02
TUBB3-201ENST00000315491 C9orf40Q8IXQ3 194 aa14.96□□□□□ -0.02
TUBB3-201ENST00000315491 METTL25Q8N6Q8 603 aa14.96□□□□□ -0.02
TUBB3-201ENST00000315491 AMER2Q8N7J2 671 aa14.96□□□□□ -0.02
TUBB3-201ENST00000315491 COX18Q8N8Q8 333 aa14.96□□□□□ -0.02
TUBB3-201ENST00000315491 ANKFN1Q8N957 763 aa14.96□□□□□ -0.02
TUBB3-201ENST00000315491 APCDD1LQ8NCL9 501 aa14.96□□□□□ -0.02
TUBB3-201ENST00000315491 BHLHE22Q8NFJ8 381 aaPredicted RBP14.96□□□□□ -0.02
TUBB3-201ENST00000315491 OR11G2Q8NGC1 345 aa14.96□□□□□ -0.02
TUBB3-201ENST00000315491 GPR151Q8TDV0 419 aa14.96□□□□□ -0.02
TUBB3-201ENST00000315491 PIK3R3Q92569 461 aa14.96□□□□□ -0.02
TUBB3-201ENST00000315491 LRGUKQ96M69 825 aa14.96□□□□□ -0.02
TUBB3-201ENST00000315491 TRIM15Q9C019 465 aa14.96□□□□□ -0.02
TUBB3-201ENST00000315491 ZNF223Q9UK11 482 aaPredicted RBP14.96□□□□□ -0.02
TUBB3-201ENST00000315491 LIPT1Q9Y234 373 aa14.96□□□□□ -0.02
TUBB3-201ENST00000315491 SH3GLB1Q9Y371 365 aa14.96□□□□□ -0.02
TUBB3-201ENST00000315491 PCDHGB3Q9Y5G1 929 aa14.96□□□□□ -0.02
TUBB3-201ENST00000315491 A8MVJ9 347 aa14.95□□□□□ -0.02
TUBB3-201ENST00000315491 CREG1O75629 220 aa14.95□□□□□ -0.02
TUBB3-201ENST00000315491 CLPTM1O96005 669 aa14.95□□□□□ -0.02
TUBB3-201ENST00000315491 IL10RAQ13651 578 aa14.95□□□□□ -0.02
TUBB3-201ENST00000315491 GNA13Q14344 377 aa14.95□□□□□ -0.02
TUBB3-201ENST00000315491 EBPQ15125 230 aaKnown RBP14.95□□□□□ -0.02
TUBB3-201ENST00000315491 SYPL1Q16563 259 aa14.95□□□□□ -0.02
TUBB3-201ENST00000315491 INTS11Q5TA45 600 aaKnown RBP14.95□□□□□ -0.02
TUBB3-201ENST00000315491 REEP3Q6NUK4 255 aa14.95□□□□□ -0.02
TUBB3-201ENST00000315491 NPSR1Q6W5P4 371 aa14.95□□□□□ -0.02
TUBB3-201ENST00000315491 NDUFAF7Q7L592 441 aa14.95□□□□□ -0.02
TUBB3-201ENST00000315491 C16orf62Q7Z3J2 963 aa14.95□□□□□ -0.02
TUBB3-201ENST00000315491 RAB43Q86YS6 212 aa14.95□□□□□ -0.02
TUBB3-201ENST00000315491 SPPL2CQ8IUH8 684 aa14.95□□□□□ -0.02
TUBB3-201ENST00000315491 FAM162AQ96A26 154 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms