RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 TAC3Q9UHF0 121 aa12.63□□□□□ -0.39
SKA3-202ENST00000314759 CH25HO95992 272 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 PAHP00439 452 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 ELK1P19419 428 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 SDHBP21912 280 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 PPP2R1BP30154 601 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 TM4SF4P48230 202 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 CDH11P55287 796 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 TAGLNQ01995 201 aaKnown RBP12.62□□□□□ -0.39
SKA3-202ENST00000314759 FUT5Q11128 374 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 MFSD13AQ14CX5 517 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 ZNF791Q3KP31 576 aaPredicted RBP12.62□□□□□ -0.39
SKA3-202ENST00000314759 FAM83HQ6ZRV2 1179 aaPredicted RBP12.62□□□□□ -0.39
SKA3-202ENST00000314759 PARS2Q7L3T8 475 aaKnown RBP12.62□□□□□ -0.39
SKA3-202ENST00000314759 NRSN1Q8IZ57 195 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 ESX1Q8N693 406 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 IRF7Q92985 503 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 DTD2Q96FN9 168 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 ZNF558Q96NG5 402 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 SLC38A2Q96QD8 506 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 GLIPR2Q9H4G4 154 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 HEXA-AS1Q9H8Q6 139 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 ZFP64Q9NPA5 681 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 ACSS1Q9NUB1 689 aaPredicted RBP12.62□□□□□ -0.39
SKA3-202ENST00000314759 SAGE1Q9NXZ1 904 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 TAS2R7Q9NYW3 318 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 LIPT1Q9Y234 373 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 TGM5O43548 720 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 NAGAP17050 411 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 CCR2P41597 374 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 METAP1P53582 386 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 CSTF1Q05048 431 aaKnown RBP12.62□□□□□ -0.39
SKA3-202ENST00000314759 RGS1Q08116 209 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 EOGTQ5NDL2 527 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 BCL2L15Q5TBC7 163 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 MZT2AQ6P582 158 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 TMEM91Q6ZNR0 172 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 NR2C2APQ86WQ0 139 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 OR11H7Q8NGC8 314 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 OR6C4Q8NGE1 309 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 SMG7Q92540 1137 aaKnown RBP12.62□□□□□ -0.39
SKA3-202ENST00000314759 COQ10AQ96MF6 247 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 ZCCHC3Q9NUD5 404 aaKnown RBP12.62□□□□□ -0.39
SKA3-202ENST00000314759 PRKAB1Q9Y478 270 aa12.62□□□□□ -0.39
SKA3-202ENST00000314759 PCYT1BQ9Y5K3 369 aaPredicted RBP12.62□□□□□ -0.39
SKA3-202ENST00000314759 NUP210Q8TEM1 1887 aaPredicted RBP12.62□□□□□ -0.39
SKA3-202ENST00000314759 A0A0G2JN53 185 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 A0A1B0GVC2 190 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 A6NIN4 97 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 FAM170BA6NMN3 283 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 PPM1DO15297 605 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 ALDH1A1P00352 501 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 SYPP08247 313 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 GAAP10253 952 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 NNMTP40261 264 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 PRKAG1P54619 331 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 FZD5Q13467 585 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 GPR176Q14439 515 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 KIAA1161Q6NSJ0 714 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 UBE3DQ7Z6J8 389 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 C17orf64Q86WR6 236 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 CREB3L1Q96BA8 519 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 FAM46AQ96IP4 442 aaKnown RBP12.61□□□□□ -0.39
SKA3-202ENST00000314759 AMDHD1Q96NU7 426 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 AUP1Q9Y679 476 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 FRS3O43559 492 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 LRG1P02750 347 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 TFPIP10646 304 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 ACP5P13686 325 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 SLC6A1P30531 599 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 TSPAN31Q12999 210 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 SNTA1Q13424 505 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 ADAM15Q13444 863 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 AADACL4Q5VUY2 407 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 SLC30A6Q6NXT4 461 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 ZNF782Q6ZMW2 699 aaPredicted RBP12.61□□□□□ -0.39
SKA3-202ENST00000314759 GNPDA2Q8TDQ7 276 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 SPRYD4Q8WW59 207 aaPredicted RBP12.61□□□□□ -0.39
SKA3-202ENST00000314759 RAD51AP1Q96B01 352 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 CHFRQ96EP1 664 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 DPEP2Q9H4A9 486 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 CDCP1Q9H5V8 836 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 BCL2L10Q9HD36 194 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 EXTL2Q9UBQ6 330 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 ZNF222Q9UK12 451 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 GOLGA4Q13439 2230 aaKnown RBP12.61□□□□□ -0.39
SKA3-202ENST00000314759 TRAV6A0A075B6T7 132 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 H7BY64 318 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 SPINT1O43278 529 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 ATF4P18848 351 aaPredicted RBP12.61□□□□□ -0.39
SKA3-202ENST00000314759 DSG2Q14126 1118 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 LY6G5CQ5SRR4 150 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 NUDT13Q86X67 352 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 GHDCQ8N2G8 530 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 BBS1Q8NFJ9 593 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 OR4Q3Q8NH05 313 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 BBS10Q8TAM1 723 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 OTULINQ96BN8 352 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 PRAP1Q96NZ9 151 aa12.61□□□□□ -0.39
SKA3-202ENST00000314759 AIF1LQ9BQI0 150 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms