RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 ZNF691Q5VV52 312 aa15.57■□□□□ 0.08
CLCF1-201ENST00000312438 IFI44Q8TCB0 444 aa15.57■□□□□ 0.08
CLCF1-201ENST00000312438 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.57■□□□□ 0.08
CLCF1-201ENST00000312438 PIK3R3Q92569 461 aa15.57■□□□□ 0.08
CLCF1-201ENST00000312438 FKBP10Q96AY3 582 aa15.57■□□□□ 0.08
CLCF1-201ENST00000312438 CNDP2Q96KP4 475 aaKnown RBP15.57■□□□□ 0.08
CLCF1-201ENST00000312438 ARHGDIGQ99819 225 aa15.57■□□□□ 0.08
CLCF1-201ENST00000312438 POLE3Q9NRF9 147 aa15.57■□□□□ 0.08
CLCF1-201ENST00000312438 PAPOLBQ9NRJ5 636 aaKnown RBP15.57■□□□□ 0.08
CLCF1-201ENST00000312438 A4GNTQ9UNA3 340 aa15.57■□□□□ 0.08
CLCF1-201ENST00000312438 SRPK3Q9UPE1 567 aa15.57■□□□□ 0.08
CLCF1-201ENST00000312438 POFUT2Q9Y2G5 429 aa15.57■□□□□ 0.08
CLCF1-201ENST00000312438 CACNA1EQ15878 2313 aa15.57■□□□□ 0.08
CLCF1-201ENST00000312438 HYAL3O43820 417 aaPredicted RBP15.57■□□□□ 0.08
CLCF1-201ENST00000312438 THBS1P07996 1170 aa15.57■□□□□ 0.08
CLCF1-201ENST00000312438 FBLP22087 321 aaKnown RBP15.57■□□□□ 0.08
CLCF1-201ENST00000312438 RPL5P46777 297 aaKnown RBP15.57■□□□□ 0.08
CLCF1-201ENST00000312438 ISL1P61371 349 aa15.57■□□□□ 0.08
CLCF1-201ENST00000312438 PIN1Q13526 163 aaPredicted RBP15.57■□□□□ 0.08
CLCF1-201ENST00000312438 APOFQ13790 326 aa15.57■□□□□ 0.08
CLCF1-201ENST00000312438 ANGPT1Q15389 498 aa15.57■□□□□ 0.08
CLCF1-201ENST00000312438 GPR68Q15743 365 aa15.57■□□□□ 0.08
CLCF1-201ENST00000312438 LPAL2Q16609 132 aa15.57■□□□□ 0.08
CLCF1-201ENST00000312438 QSOX2Q6ZRP7 698 aa15.57■□□□□ 0.08
CLCF1-201ENST00000312438 BMP8AQ7Z5Y6 402 aa15.57■□□□□ 0.08
CLCF1-201ENST00000312438 ZNF619Q8N2I2 560 aa15.57■□□□□ 0.08
CLCF1-201ENST00000312438 SETD9Q8NE22 299 aa15.57■□□□□ 0.08
CLCF1-201ENST00000312438 NR4A3Q92570 626 aa15.57■□□□□ 0.08
CLCF1-201ENST00000312438 FNDC11Q9BVV2 318 aa15.57■□□□□ 0.08
CLCF1-201ENST00000312438 FOLH1BQ9HBA9 442 aa15.57■□□□□ 0.08
CLCF1-201ENST00000312438 RLIMQ9NVW2 624 aa15.57■□□□□ 0.08
CLCF1-201ENST00000312438 HEMK1Q9Y5R4 338 aaPredicted RBP15.57■□□□□ 0.08
CLCF1-201ENST00000312438 HSPE1-MOB4S4R3N1 261 aa15.57■□□□□ 0.08
CLCF1-201ENST00000312438 TNRC6BQ9UPQ9 1833 aaKnown RBP15.56■□□□□ 0.08
CLCF1-201ENST00000312438 A0A1W2PRQ8 180 aa15.56■□□□□ 0.08
CLCF1-201ENST00000312438 TRIM64A6NGJ6 449 aa15.56■□□□□ 0.08
CLCF1-201ENST00000312438 TTC36A6NLP5 189 aa15.56■□□□□ 0.08
CLCF1-201ENST00000312438 PRAMEF2O60811 474 aa15.56■□□□□ 0.08
CLCF1-201ENST00000312438 OXSR1O95747 527 aaPredicted RBP15.56■□□□□ 0.08
CLCF1-201ENST00000312438 TFAP2AP05549 437 aa15.56■□□□□ 0.08
CLCF1-201ENST00000312438 DBIP07108 87 aaKnown RBP15.56■□□□□ 0.08
CLCF1-201ENST00000312438 GUSBP08236 651 aa15.56■□□□□ 0.08
CLCF1-201ENST00000312438 ATP6V1B1P15313 513 aa15.56■□□□□ 0.08
CLCF1-201ENST00000312438 FUT4P22083 530 aa15.56■□□□□ 0.08
CLCF1-201ENST00000312438 SSTR4P31391 388 aa15.56■□□□□ 0.08
CLCF1-201ENST00000312438 CLK3P49761 638 aaKnown RBP15.56■□□□□ 0.08
CLCF1-201ENST00000312438 PSG6Q00889 435 aa15.56■□□□□ 0.08
CLCF1-201ENST00000312438 DGCR6Q14129 220 aa15.56■□□□□ 0.08
CLCF1-201ENST00000312438 PRRC1Q96M27 445 aa15.56■□□□□ 0.08
CLCF1-201ENST00000312438 CNPPD1Q9BV87 410 aa15.56■□□□□ 0.08
CLCF1-201ENST00000312438 GABARAPL3Q9BY60 117 aa15.56■□□□□ 0.08
CLCF1-201ENST00000312438 TUBA8Q9NY65 449 aaPredicted RBP15.56■□□□□ 0.08
CLCF1-201ENST00000312438 NDRG4Q9ULP0 352 aaKnown RBP15.56■□□□□ 0.08
CLCF1-201ENST00000312438 ZNF443Q9Y2A4 671 aaPredicted RBP15.56■□□□□ 0.08
CLCF1-201ENST00000312438 CHST2Q9Y4C5 530 aa15.56■□□□□ 0.08
CLCF1-201ENST00000312438 HRKO00198 91 aa15.55■□□□□ 0.08
CLCF1-201ENST00000312438 FAAHO00519 579 aa15.55■□□□□ 0.08
CLCF1-201ENST00000312438 UGT2B17O75795 530 aa15.55■□□□□ 0.08
CLCF1-201ENST00000312438 ELAVL4P26378 380 aaKnown RBP15.55■□□□□ 0.08
CLCF1-201ENST00000312438 PGDP52209 483 aa15.55■□□□□ 0.08
CLCF1-201ENST00000312438 TUBA4AP68366 448 aa15.55■□□□□ 0.08
CLCF1-201ENST00000312438 RPP38P78345 283 aaKnown RBP15.55■□□□□ 0.08
CLCF1-201ENST00000312438 FGD3Q5JSP0 725 aa15.55■□□□□ 0.08
CLCF1-201ENST00000312438 RHBDD2Q6NTF9 364 aa15.55■□□□□ 0.08
CLCF1-201ENST00000312438 TSPYL5Q86VY4 417 aaPredicted RBP15.55■□□□□ 0.08
CLCF1-201ENST00000312438 CLIP4Q8N3C7 705 aa15.55■□□□□ 0.08
CLCF1-201ENST00000312438 RCBTB1Q8NDN9 531 aa15.55■□□□□ 0.08
CLCF1-201ENST00000312438 OR7G1Q8NGA0 311 aa15.55■□□□□ 0.08
CLCF1-201ENST00000312438 OR9Q2Q8NGE9 314 aa15.55■□□□□ 0.08
CLCF1-201ENST00000312438 LOXL4Q96JB6 756 aa15.55■□□□□ 0.08
CLCF1-201ENST00000312438 VSTM2LQ96N03 204 aa15.55■□□□□ 0.08
CLCF1-201ENST00000312438 APOL4Q9BPW4 351 aa15.55■□□□□ 0.08
CLCF1-201ENST00000312438 NIPSNAP1Q9BPW8 284 aa15.55■□□□□ 0.08
CLCF1-201ENST00000312438 SLC7A5P2Q9GIP4 190 aa15.55■□□□□ 0.08
CLCF1-201ENST00000312438 OR10A5Q9H207 317 aa15.55■□□□□ 0.08
CLCF1-201ENST00000312438 SYNDIG1Q9H7V2 258 aa15.55■□□□□ 0.08
CLCF1-201ENST00000312438 ENOPH1Q9UHY7 261 aa15.55■□□□□ 0.08
CLCF1-201ENST00000312438 GMPPBQ9Y5P6 360 aa15.55■□□□□ 0.08
CLCF1-201ENST00000312438 CABIN1Q9Y6J0 2220 aa15.55■□□□□ 0.08
CLCF1-201ENST00000312438 PCDH15Q96QU1 1955 aa15.55■□□□□ 0.08
CLCF1-201ENST00000312438 A0A087WXM4 84 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 TRBV4-1A0A0J9YWV2 114 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 GXYLT2A0PJZ3 443 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 E9PQ18 207 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 DYRK3O43781 588 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 BRINP1O60477 761 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 KCNK2O95069 426 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 GASTP01350 101 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 ATXN8OSP0DMR3 200 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 CYP4B1P13584 511 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 CBLP22681 906 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 ELK4P28324 431 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 IFNA8P32881 189 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 NR1H2P55055 460 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 FOXD4Q12950 439 aaPredicted RBP15.54■□□□□ 0.08
CLCF1-201ENST00000312438 RAPSNQ13702 412 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 NPTX1Q15818 432 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 MINDY4Q4G0A6 757 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 EIPR1Q53HC9 387 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 RBM48Q5RL73 367 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms