RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 MTNR1AP48039 350 aa14.19□□□□□ -0.14
CSDC2-201ENST00000306149 ENTPD8Q5MY95 495 aa14.19□□□□□ -0.14
CSDC2-201ENST00000306149 SLC27A4Q6P1M0 643 aa14.19□□□□□ -0.14
CSDC2-201ENST00000306149 RDH10Q8IZV5 341 aa14.19□□□□□ -0.14
CSDC2-201ENST00000306149 HDDC3Q8N4P3 179 aa14.19□□□□□ -0.14
CSDC2-201ENST00000306149 ANKK1Q8NFD2 765 aa14.19□□□□□ -0.14
CSDC2-201ENST00000306149 TMEM163Q8TC26 289 aa14.19□□□□□ -0.14
CSDC2-201ENST00000306149 SPATA5L1Q9BVQ7 753 aa14.19□□□□□ -0.14
CSDC2-201ENST00000306149 SLC38A1Q9H2H9 487 aa14.19□□□□□ -0.14
CSDC2-201ENST00000306149 BCL2L10Q9HD36 194 aa14.19□□□□□ -0.14
CSDC2-201ENST00000306149 MALT1Q9UDY8 824 aa14.19□□□□□ -0.14
CSDC2-201ENST00000306149 VCANP13611 3396 aa14.19□□□□□ -0.14
CSDC2-201ENST00000306149 SPTBN5Q9NRC6 3674 aaKnown RBP14.18□□□□□ -0.14
CSDC2-201ENST00000306149 LINC01553A4QN01 128 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 CCDC182A6NF36 153 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 TMCC2O75069 709 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 CSF3P09919 207 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 GNSP15586 552 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 GPR4P46093 362 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 SLC9A3P48764 834 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 CLDN2P57739 230 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 FABP5Q01469 135 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 DDI2Q5TDH0 399 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 GET4Q7L5D6 327 aaPredicted RBP14.18□□□□□ -0.14
CSDC2-201ENST00000306149 RRM2BQ7LG56 351 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 GALNT12Q8IXK2 581 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 VWA5B2Q8N398 1253 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 RAB42Q8N4Z0 105 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 OR52P1PQ8NH57 321 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 OTULINQ96BN8 352 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 GDF15Q99988 308 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 TEX101Q9BY14 249 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 APOBEC3BQ9UH17 382 aaKnown RBP14.18□□□□□ -0.14
CSDC2-201ENST00000306149 ACSL5Q9ULC5 683 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 ZFR2Q9UPR6 939 aaKnown RBP14.18□□□□□ -0.14
CSDC2-201ENST00000306149 ENTPD4Q9Y227 616 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 ANKRD34BA5PLL1 514 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 ZIC2O95409 532 aaPredicted RBP14.18□□□□□ -0.14
CSDC2-201ENST00000306149 SLC2A10O95528 541 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 LIMS3P0CW19 117 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 LIMS4P0CW20 117 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 ACP2P11117 423 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 ACADMP11310 421 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 CST6Q15828 149 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 KLHL22Q53GT1 634 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 C6orf132Q5T0Z8 1188 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 TANGO2Q6ICL3 276 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 PSRC1Q6PGN9 363 aaPredicted RBP14.18□□□□□ -0.14
CSDC2-201ENST00000306149 ABI3BPQ7Z7G0 1075 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 KCT2Q8NC54 265 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 NUP43Q8NFH3 380 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 SLC7A6Q92536 515 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 SMARCD2Q92925 531 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 RAB7BQ96AH8 199 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 RNF170Q96K19 258 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 KCTD7Q96MP8 289 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 KATNB1Q9BVA0 655 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 ISYNA1Q9NPH2 558 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 MRPS18AQ9NVS2 196 aaKnown RBP14.18□□□□□ -0.14
CSDC2-201ENST00000306149 COMMD3Q9UBI1 195 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 SLC13A4Q9UKG4 626 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 BOLA1Q9Y3E2 137 aa14.18□□□□□ -0.14
CSDC2-201ENST00000306149 A0A0G2JPF8 293 aa14.17□□□□□ -0.14
CSDC2-201ENST00000306149 TMEM129A0AVI4 362 aa14.17□□□□□ -0.14
CSDC2-201ENST00000306149 IRGMA1A4Y4 181 aa14.17□□□□□ -0.14
CSDC2-201ENST00000306149 HNRNPCL2B2RXH8 293 aa14.17□□□□□ -0.14
CSDC2-201ENST00000306149 HNRNPCL3B7ZW38 293 aa14.17□□□□□ -0.14
CSDC2-201ENST00000306149 PRODHO43272 600 aa14.17□□□□□ -0.14
CSDC2-201ENST00000306149 NCR1O76036 304 aa14.17□□□□□ -0.14
CSDC2-201ENST00000306149 ALPPP05187 535 aa14.17□□□□□ -0.14
CSDC2-201ENST00000306149 HNRNPCL4P0DMR1 293 aa14.17□□□□□ -0.14
CSDC2-201ENST00000306149 PEBP1P30086 187 aaKnown RBP14.17□□□□□ -0.14
CSDC2-201ENST00000306149 TRA2BP62995 288 aaKnown RBP14.17□□□□□ -0.14
CSDC2-201ENST00000306149 TGM3Q08188 693 aa14.17□□□□□ -0.14
CSDC2-201ENST00000306149 LRRC32Q14392 662 aa14.17□□□□□ -0.14
CSDC2-201ENST00000306149 ZIC1Q15915 447 aa14.17□□□□□ -0.14
CSDC2-201ENST00000306149 DUSP6Q16828 381 aa14.17□□□□□ -0.14
CSDC2-201ENST00000306149 PLK5Q496M5 336 aa14.17□□□□□ -0.14
CSDC2-201ENST00000306149 SLC35F1Q5T1Q4 408 aa14.17□□□□□ -0.14
CSDC2-201ENST00000306149 BBS1Q8NFJ9 593 aa14.17□□□□□ -0.14
CSDC2-201ENST00000306149 DEPDC7Q96QD5 511 aa14.17□□□□□ -0.14
CSDC2-201ENST00000306149 HDHD5Q9BXW7 423 aa14.17□□□□□ -0.14
CSDC2-201ENST00000306149 SLC6A17Q9H1V8 727 aa14.17□□□□□ -0.14
CSDC2-201ENST00000306149 FGF20Q9NP95 211 aaPredicted RBP14.17□□□□□ -0.14
CSDC2-201ENST00000306149 THAP10Q9P2Z0 257 aaPredicted RBP14.17□□□□□ -0.14
CSDC2-201ENST00000306149 EYSQ5T1H1 3165 aa14.17□□□□□ -0.14
CSDC2-201ENST00000306149 MUC22E2RYF6 1773 aaPredicted RBP14.17□□□□□ -0.14
CSDC2-201ENST00000306149 TRBV23OR9-2A0A075B6M9 112 aa14.17□□□□□ -0.14
CSDC2-201ENST00000306149 PIP5K1CO60331 668 aa14.17□□□□□ -0.14
CSDC2-201ENST00000306149 UBXN7O94888 489 aa14.17□□□□□ -0.14
CSDC2-201ENST00000306149 KAT7O95251 611 aa14.17□□□□□ -0.14
CSDC2-201ENST00000306149 CSNK2A2P19784 350 aaPredicted RBP14.17□□□□□ -0.14
CSDC2-201ENST00000306149 PDGFRLQ15198 375 aa14.17□□□□□ -0.14
CSDC2-201ENST00000306149 PYDC2Q56P42 97 aa14.17□□□□□ -0.14
CSDC2-201ENST00000306149 PDZK1Q5T2W1 519 aa14.17□□□□□ -0.14
CSDC2-201ENST00000306149 SLC36A4Q6YBV0 504 aa14.17□□□□□ -0.14
CSDC2-201ENST00000306149 NANOGNBQ7Z5D8 188 aa14.17□□□□□ -0.14
CSDC2-201ENST00000306149 OR4N5Q8IXE1 308 aa14.17□□□□□ -0.14
CSDC2-201ENST00000306149 SHISA5Q8N114 240 aa14.17□□□□□ -0.14
CSDC2-201ENST00000306149 OR2L3Q8NG85 312 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms