RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 BORAQ6PGQ7 559 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 UNQ6126/PRO20091Q6UXV3 157 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 FAM3CQ92520 227 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 NINJ1Q92982 152 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 CIDECQ96AQ7 238 aaPredicted RBP12.11□□□□□ -0.47
PTCD1-201ENST00000292478 NEDD4LQ96PU5 975 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 LPAR4Q99677 370 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 IRF2BPLQ9H1B7 796 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 VNN3Q9NY84 501 aa12.11□□□□□ -0.47
PTCD1-201ENST00000292478 HSPA12AO43301 675 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 APOL3O95236 402 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 DEFA5Q01523 94 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 DLX2Q07687 328 aaPredicted RBP12.1□□□□□ -0.47
PTCD1-201ENST00000292478 RAB11BQ15907 218 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 CCBE1Q6UXH8 406 aaPredicted RBP12.1□□□□□ -0.47
PTCD1-201ENST00000292478 FTMTQ8N4E7 242 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 MRPL43Q8N983 215 aaKnown RBP12.1□□□□□ -0.47
PTCD1-201ENST00000292478 FAM174AQ8TBP5 190 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 ABCG5Q9H222 651 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 PRSS21Q9Y6M0 314 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 GABRR3A8MPY1 467 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 TSPAN4O14817 238 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 CERS1P27544 350 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 NKX3-2P78367 333 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 DSC1Q08554 894 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 ZNF534Q76KX8 674 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 OR8S1Q8NH09 359 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 STOML3Q8TAV4 291 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 SLC29A1Q99808 456 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 SLC5A7Q9GZV3 580 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 TREM1Q9NP99 234 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 ACSS1Q9NUB1 689 aaPredicted RBP12.1□□□□□ -0.47
PTCD1-201ENST00000292478 HPF1Q9NWY4 346 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 ENPP5Q9UJA9 477 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 INTS6Q9UL03 887 aaKnown RBP12.1□□□□□ -0.47
PTCD1-201ENST00000292478 SLC6A5Q9Y345 797 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 PRDX3P30048 256 aaKnown RBP12.1□□□□□ -0.47
PTCD1-201ENST00000292478 KCNJ5P48544 419 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 NSDHLQ15738 373 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 UBQLNLQ8IYU4 475 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 ZNF471Q9BX82 626 aaPredicted RBP12.1□□□□□ -0.47
PTCD1-201ENST00000292478 C14orf119Q9NWQ9 140 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 SLC35A3Q9Y2D2 325 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 BORCS7-ASMTA0A0B4J1R7 106 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 A6NIZ1 184 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 AGTR1P30556 359 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 STT3AP46977 705 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 ACTBP60709 375 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 RAP1BP61224 184 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 RAP1AP62834 184 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 ACTG1P63261 375 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 RAB40BQ12829 278 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 TAS1R1Q7RTX1 841 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 ACOT4Q8N9L9 421 aa12.1□□□□□ -0.47
PTCD1-201ENST00000292478 ZNF888P0CJ79 500 aaPredicted RBP12.09□□□□□ -0.47
PTCD1-201ENST00000292478 AHRP35869 848 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 ADH7P40394 386 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 NNATQ16517 81 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 NTRK2Q16620 822 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 NADSYN1Q6IA69 706 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 LRFN4Q6PJG9 635 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 ASCC1Q8N9N2 400 aaKnown RBP12.09□□□□□ -0.47
PTCD1-201ENST00000292478 WDR20Q8TBZ3 569 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 PMM1Q92871 262 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 SPATA6Q9NWH7 488 aaPredicted RBP12.09□□□□□ -0.47
PTCD1-201ENST00000292478 RDH8Q9NYR8 311 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 UBQLN2Q9UHD9 624 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 CENPBD1B2RD01 187 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 CRABP1P29762 137 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 CD97P48960 835 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 CTXN1P60606 82 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 RPS26P11Q5JNZ5 115 aaPredicted RBP12.09□□□□□ -0.47
PTCD1-201ENST00000292478 TMEM205Q6UW68 189 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 OR4K13Q8NH42 304 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 SAMD8Q96LT4 415 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 C3orf30Q96M34 536 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 ZNF350Q9GZX5 532 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 INPP5EQ9NRR6 644 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 C2orf42Q9NWW7 574 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 HS3ST2Q9Y278 367 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 CHD4Q14839 1912 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 MYH15Q9Y2K3 1946 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 I3L521 148 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 KIAA0355O15063 1070 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 LAMTOR5O43504 91 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 GABBR2O75899 941 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 SYPP08247 313 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 NCS1P62166 190 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 EFR3AQ14156 821 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 UGT8Q16880 541 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 TMEM151BQ8IW70 566 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 OR5T2Q8NGG2 359 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 CASTOR1Q8WTX7 329 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 NRG4Q8WWG1 115 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 HDHD5Q9BXW7 423 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 ALOXE3Q9BYJ1 711 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 RNF38Q9H0F5 515 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 SLC7A7Q9UM01 511 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 ARSAP15289 507 aa12.09□□□□□ -0.47
PTCD1-201ENST00000292478 MC3RP41968 323 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms