RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 ZNF273Q14593 569 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 SNAPC1Q16533 368 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 MEDAGQ5VYS4 303 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 LIPJQ5W064 366 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 ZNF730Q6ZMV8 503 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 TCEANCQ8N8B7 351 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 OR7G3Q8NG95 312 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 OR8K5Q8NH50 307 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 HUS1BQ8NHY5 278 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 CEP76Q8TAP6 659 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 FOPNLQ96NB1 174 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 SORCS2Q96PQ0 1159 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 WACQ9BTA9 647 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 CD207Q9UJ71 328 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 PLAGL1Q9UM63 463 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 GTPBP1O00178 669 aaKnown RBP15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 SCAMP1O15126 338 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 CHP2O43745 196 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 B3GALNT1O75752 331 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 PAPLNO95428 1278 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 MPC2O95563 127 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 INPP1P49441 399 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 AGFG1P52594 562 aaKnown RBP15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 MVDP53602 400 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 CNTN1Q12860 1018 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 LRRC32Q14392 662 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 CRTC2Q53ET0 693 aaPredicted RBP15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 TRILQ7L0X0 811 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 COQ10AQ96MF6 247 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 IL17FQ96PD4 163 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 TMEM121BQ9BXQ6 578 aaPredicted RBP15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 ENOPH1Q9UHY7 261 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 ZNF222Q9UK12 451 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 GMEB2Q9UKD1 530 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 CORO2BQ9UQ03 480 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 RPL36Q9Y3U8 105 aaKnown RBP15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 ZNF175Q9Y473 711 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 PLXNA2O75051 1894 aa15.01□□□□□ -0.01
MAP1LC3B-201ENST00000268607 ARPC4-TTLL3A0A0A6YYG9 625 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 H3BN98 237 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 PRMT3O60678 531 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 CFDP00746 253 aaPredicted RBP15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 PRNPP04156 253 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 ETV5P41161 510 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 RPS13P62277 151 aaKnown RBP15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 SNRPGP62308 76 aaKnown RBP15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 RBBP4Q09028 425 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 BAMBIQ13145 260 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 GPR68Q15743 365 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 ZNF57Q68EA5 555 aaPredicted RBP15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 RASGRP3Q8IV61 690 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 ZNF547Q8IVP9 402 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 PLA2G15Q8NCC3 412 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 PUM2Q8TB72 1066 aaKnown RBP eCLIP15□□□□□ -0.011e-8■■■□□ 15.2
MAP1LC3B-201ENST00000268607 NUS1Q96E22 293 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 TMEM43Q9BTV4 400 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 ACSL6Q9UKU0 697 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 PCDHGB7Q9Y5F8 929 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 HRH3Q9Y5N1 445 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 CDH10Q9Y6N8 788 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 PIAS3Q9Y6X2 628 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 CFAP54Q96N23 3096 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 LRRK1Q38SD2 2015 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 TRBV4-1A0A0J9YWV2 114 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 GNG14A0A1W2PPG7 69 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 APOL3O95236 402 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 C1orf105O95561 183 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 ANXA4P09525 319 aaPredicted RBP15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 TPMTP51580 245 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 HMGA2P52926 109 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 TBPL1P62380 186 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 IGSF11Q5DX21 431 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 OR2G6Q5TZ20 316 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 CEACAM20Q6UY09 585 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 GHDCQ8N2G8 530 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 SLC44A3Q8N4M1 653 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 VPS37AQ8NEZ2 397 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 OR4K1Q8NGD4 311 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 GEMIN6Q8WXD5 167 aaKnown RBP15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 AP3S1Q92572 193 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 SGTBQ96EQ0 304 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 LRIG1Q96JA1 1093 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 RBP7Q96R05 134 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 PIGUQ9H490 435 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 A0A0A6YYJ9 748 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 A0A1W2PP55 124 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 LINC01387J3KSC0 135 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 AKAP8O43823 692 aaKnown RBP15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 NCR1O76036 304 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 TGFB1P01137 390 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 IFNA7P01567 189 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 APODP05090 189 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 ADRB3P13945 408 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 CPEP16870 476 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 ZNF8P17098 575 aaPredicted RBP15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 PPIBP23284 216 aaKnown RBP15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 CTHP32929 405 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 ZNF81P51508 661 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 RAB14P61106 215 aa15□□□□□ -0.01
MAP1LC3B-201ENST00000268607 PPP3R1P63098 170 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms