RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 PCDH10Q9P2E7 1040 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 C4BP0C0L5 1744 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 KIAA0355O15063 1070 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 LDB3O75112 727 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 CNMDO75829 334 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 TAS1R1Q7RTX1 841 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 NDNFQ8TB73 568 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 FOXN4Q96NZ1 517 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 SERINC2Q96SA4 455 aa11.47□□□□□ -0.57
COL8A1-201ENST00000261037 C17orf105B2RV13 164 aa11.46□□□□□ -0.57
COL8A1-201ENST00000261037 RDH16O75452 317 aa11.46□□□□□ -0.57
COL8A1-201ENST00000261037 TMEM225BP0DP42 221 aa11.46□□□□□ -0.57
COL8A1-201ENST00000261037 GRM7Q14831 915 aa11.46□□□□□ -0.57
COL8A1-201ENST00000261037 NTRK2Q16620 822 aa11.46□□□□□ -0.57
COL8A1-201ENST00000261037 PLEKHN1Q494U1 663 aaPredicted RBP11.46□□□□□ -0.57
COL8A1-201ENST00000261037 TEX26Q8N6G2 289 aa11.46□□□□□ -0.57
COL8A1-201ENST00000261037 OR51T1Q8NGJ9 327 aa11.46□□□□□ -0.57
COL8A1-201ENST00000261037 ZFYVE21Q9BQ24 234 aa11.46□□□□□ -0.57
COL8A1-201ENST00000261037 FUNDC2Q9BWH2 189 aa11.46□□□□□ -0.57
COL8A1-201ENST00000261037 PELI2Q9HAT8 420 aa11.46□□□□□ -0.57
COL8A1-201ENST00000261037 TMEM14AQ9Y6G1 99 aa11.46□□□□□ -0.57
COL8A1-201ENST00000261037 TVP23AA6NH52 213 aa11.46□□□□□ -0.57
COL8A1-201ENST00000261037 APBB3O95704 486 aa11.46□□□□□ -0.57
COL8A1-201ENST00000261037 PROS1P07225 676 aa11.46□□□□□ -0.57
COL8A1-201ENST00000261037 FBXO45P0C2W1 286 aa11.46□□□□□ -0.57
COL8A1-201ENST00000261037 MSL3P1P0C860 447 aa11.46□□□□□ -0.57
COL8A1-201ENST00000261037 PITPNBP48739 271 aa11.46□□□□□ -0.57
COL8A1-201ENST00000261037 GSTM4Q03013 218 aa11.46□□□□□ -0.57
COL8A1-201ENST00000261037 NKPD1Q17RQ9 610 aa11.46□□□□□ -0.57
COL8A1-201ENST00000261037 MAMDC4Q6UXC1 1216 aa11.46□□□□□ -0.57
COL8A1-201ENST00000261037 Q6ZSR6 202 aa11.46□□□□□ -0.57
COL8A1-201ENST00000261037 HSD11B1LQ7Z5J1 315 aa11.46□□□□□ -0.57
COL8A1-201ENST00000261037 BEST3Q8N1M1 668 aa11.46□□□□□ -0.57
COL8A1-201ENST00000261037 FKBP10Q96AY3 582 aa11.46□□□□□ -0.57
COL8A1-201ENST00000261037 SLC45A3Q96JT2 553 aa11.46□□□□□ -0.57
COL8A1-201ENST00000261037 ADAM18Q9Y3Q7 739 aa11.46□□□□□ -0.57
COL8A1-201ENST00000261037 ZNF175Q9Y473 711 aa11.46□□□□□ -0.57
COL8A1-201ENST00000261037 G3V2L1 256 aa11.46□□□□□ -0.58
COL8A1-201ENST00000261037 NME4O00746 187 aa11.46□□□□□ -0.58
COL8A1-201ENST00000261037 DIRAS3O95661 229 aa11.46□□□□□ -0.58
COL8A1-201ENST00000261037 CD79AP11912 226 aa11.46□□□□□ -0.58
COL8A1-201ENST00000261037 IL7P13232 177 aa11.46□□□□□ -0.58
COL8A1-201ENST00000261037 MTNR1AP48039 350 aa11.46□□□□□ -0.58
COL8A1-201ENST00000261037 ZNF440Q8IYI8 595 aa11.46□□□□□ -0.58
COL8A1-201ENST00000261037 CYB561A3Q8NBI2 242 aa11.46□□□□□ -0.58
COL8A1-201ENST00000261037 FOXJ1Q92949 421 aa11.46□□□□□ -0.58
COL8A1-201ENST00000261037 LRRC46Q96FV0 321 aa11.46□□□□□ -0.58
COL8A1-201ENST00000261037 FAM71F1Q96KD3 344 aaPredicted RBP11.46□□□□□ -0.58
COL8A1-201ENST00000261037 SLC2A11Q9BYW1 496 aa11.46□□□□□ -0.58
COL8A1-201ENST00000261037 SMAD6O43541 496 aaKnown RBP11.46□□□□□ -0.58
COL8A1-201ENST00000261037 SYT7O43581 403 aa11.46□□□□□ -0.58
COL8A1-201ENST00000261037 LATS1O95835 1130 aa11.46□□□□□ -0.58
COL8A1-201ENST00000261037 AMY2AP04746 511 aa11.46□□□□□ -0.58
COL8A1-201ENST00000261037 PNMTP11086 282 aa11.46□□□□□ -0.58
COL8A1-201ENST00000261037 CYBAP13498 195 aa11.46□□□□□ -0.58
COL8A1-201ENST00000261037 RAB3BP20337 219 aa11.46□□□□□ -0.58
COL8A1-201ENST00000261037 CD34P28906 385 aa11.46□□□□□ -0.58
COL8A1-201ENST00000261037 PTH2RP49190 550 aa11.46□□□□□ -0.58
COL8A1-201ENST00000261037 RAB15P59190 212 aa11.46□□□□□ -0.58
COL8A1-201ENST00000261037 ZNF616Q08AN1 781 aa11.46□□□□□ -0.58
COL8A1-201ENST00000261037 SIX1Q15475 284 aaPredicted RBP11.46□□□□□ -0.58
COL8A1-201ENST00000261037 AAK1Q2M2I8 961 aa11.46□□□□□ -0.58
COL8A1-201ENST00000261037 C15orf39Q6ZRI6 1047 aa11.46□□□□□ -0.58
COL8A1-201ENST00000261037 MFSD6LQ8IWD5 586 aa11.46□□□□□ -0.58
COL8A1-201ENST00000261037 ACBD7Q8N6N7 88 aa11.46□□□□□ -0.58
COL8A1-201ENST00000261037 SYT14Q8NB59 555 aa11.46□□□□□ -0.58
COL8A1-201ENST00000261037 ZMYND19Q96E35 227 aaPredicted RBP11.46□□□□□ -0.58
COL8A1-201ENST00000261037 SGCZQ96LD1 299 aa11.46□□□□□ -0.58
COL8A1-201ENST00000261037 TMEM246Q9BRR3 403 aa11.46□□□□□ -0.58
COL8A1-201ENST00000261037 USP36Q9P275 1121 aaKnown RBP11.46□□□□□ -0.58
COL8A1-201ENST00000261037 PRSS21Q9Y6M0 314 aa11.46□□□□□ -0.58
COL8A1-201ENST00000261037 MEIS3P1A6NDR6 274 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 ZNF43P17038 809 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 NKX2-5P52952 324 aaPredicted RBP11.45□□□□□ -0.58
COL8A1-201ENST00000261037 DSC1Q08554 894 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 PAGE3Q5JUK9 113 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 PIP5KL1Q5T9C9 394 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 ZNF765Q7L2R6 523 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 SDR9C7Q8NEX9 313 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 OR4K5Q8NGD3 323 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 CD200R1Q8TD46 325 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 APOOQ9BUR5 198 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 SLC12A9Q9BXP2 914 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 LMAN1LQ9HAT1 526 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 PCDHGA7Q9Y5G6 932 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 CRTAPO75718 401 aaPredicted RBP11.45□□□□□ -0.58
COL8A1-201ENST00000261037 AK1P00568 194 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 SYPP08247 313 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 SGSHP51688 502 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 HOXC5Q00444 222 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 TLE3Q04726 772 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 DPY19L4Q7Z388 723 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 ZNF619Q8N2I2 560 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 CDS1Q92903 461 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 LHPPQ9H008 270 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 MTHFD2LQ9H903 347 aaPredicted RBP11.45□□□□□ -0.58
COL8A1-201ENST00000261037 ACTR10Q9NZ32 417 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 A0A0A6YYC8 382 aaPredicted RBP11.45□□□□□ -0.58
COL8A1-201ENST00000261037 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.45□□□□□ -0.58
COL8A1-201ENST00000261037 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms