RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 LINC00471Q8N535 108 aa25.8■■□□□ 1.72
CCM2-201ENST00000258781 OR52P1PQ8NH57 321 aa25.8■■□□□ 1.72
CCM2-201ENST00000258781 GTPBP3Q969Y2 492 aaKnown RBP25.8■■□□□ 1.72
CCM2-201ENST00000258781 DUSP23Q9BVJ7 150 aa25.8■■□□□ 1.72
CCM2-201ENST00000258781 GTPBP2Q9BX10 602 aaKnown RBP25.8■■□□□ 1.72
CCM2-201ENST00000258781 CACYBPQ9HB71 228 aaKnown RBP25.8■■□□□ 1.72
CCM2-201ENST00000258781 TPRKBQ9Y3C4 175 aa25.8■■□□□ 1.72
CCM2-201ENST00000258781 LY6G6EA0A0G2JKS1 128 aa25.79■■□□□ 1.72
CCM2-201ENST00000258781 YKT6O15498 198 aa25.79■■□□□ 1.72
CCM2-201ENST00000258781 FCMRO60667 390 aa25.79■■□□□ 1.72
CCM2-201ENST00000258781 CER1O95813 267 aa25.79■■□□□ 1.72
CCM2-201ENST00000258781 GASTP01350 101 aa25.79■■□□□ 1.72
CCM2-201ENST00000258781 CT62P0C5K7 136 aa25.79■■□□□ 1.72
CCM2-201ENST00000258781 MAP3K8P41279 467 aa25.79■■□□□ 1.72
CCM2-201ENST00000258781 GPLD1P80108 840 aa25.79■■□□□ 1.72
CCM2-201ENST00000258781 PIN1Q13526 163 aaPredicted RBP25.79■■□□□ 1.72
CCM2-201ENST00000258781 SEC23BQ15437 767 aa25.79■■□□□ 1.72
CCM2-201ENST00000258781 TYW3Q6IPR3 259 aaKnown RBP25.79■■□□□ 1.72
CCM2-201ENST00000258781 VWA5B2Q8N398 1253 aa25.79■■□□□ 1.72
CCM2-201ENST00000258781 PEX11GQ96HA9 241 aa25.79■■□□□ 1.72
CCM2-201ENST00000258781 SDF2Q99470 211 aa25.79■■□□□ 1.72
CCM2-201ENST00000258781 KLHL28Q9NXS3 571 aa25.79■■□□□ 1.72
CCM2-201ENST00000258781 U3KQA8 63 aa25.79■■□□□ 1.72
CCM2-201ENST00000258781 H0YIG0 161 aa25.79■■□□□ 1.72
CCM2-201ENST00000258781 SIGLEC6O43699 453 aa25.79■■□□□ 1.72
CCM2-201ENST00000258781 COQ9O75208 318 aa25.79■■□□□ 1.72
CCM2-201ENST00000258781 SOX30O94993 753 aa25.79■■□□□ 1.72
CCM2-201ENST00000258781 AK1P00568 194 aa25.79■■□□□ 1.72
CCM2-201ENST00000258781 HTR1AP08908 422 aa25.79■■□□□ 1.72
CCM2-201ENST00000258781 PMS2P3Q13401 168 aa25.79■■□□□ 1.72
CCM2-201ENST00000258781 NPTX1Q15818 432 aa25.79■■□□□ 1.72
CCM2-201ENST00000258781 KLHL17Q6TDP4 642 aa25.79■■□□□ 1.72
CCM2-201ENST00000258781 PEX5LQ8IYB4 626 aa25.79■■□□□ 1.72
CCM2-201ENST00000258781 ENTHD1Q8IYW4 607 aa25.79■■□□□ 1.72
CCM2-201ENST00000258781 SPARTQ8N0X7 666 aa25.79■■□□□ 1.72
CCM2-201ENST00000258781 HOXB13Q92826 284 aaPredicted RBP25.79■■□□□ 1.72
CCM2-201ENST00000258781 ZG16BQ96DA0 208 aa25.79■■□□□ 1.72
CCM2-201ENST00000258781 LOXL4Q96JB6 756 aa25.79■■□□□ 1.72
CCM2-201ENST00000258781 COL25A1Q9BXS0 654 aaPredicted RBP25.79■■□□□ 1.72
CCM2-201ENST00000258781 ZNF350Q9GZX5 532 aa25.79■■□□□ 1.72
CCM2-201ENST00000258781 SCN3BQ9NY72 215 aa25.79■■□□□ 1.72
CCM2-201ENST00000258781 KLHL3Q9UH77 587 aa25.79■■□□□ 1.72
CCM2-201ENST00000258781 RSL24D1Q9UHA3 163 aaKnown RBP25.79■■□□□ 1.72
CCM2-201ENST00000258781 SPTBP11277 2137 aa25.78■■□□□ 1.72
CCM2-201ENST00000258781 MN1Q10571 1320 aaPredicted RBP25.78■■□□□ 1.72
CCM2-201ENST00000258781 SH3PXD2BA1X283 911 aa25.78■■□□□ 1.72
CCM2-201ENST00000258781 CLDN4O14493 209 aa25.78■■□□□ 1.72
CCM2-201ENST00000258781 FMO3P31513 532 aa25.78■■□□□ 1.72
CCM2-201ENST00000258781 CSNK2BP67870 215 aa25.78■■□□□ 1.72
CCM2-201ENST00000258781 SLC13A2Q13183 592 aa25.78■■□□□ 1.72
CCM2-201ENST00000258781 EXOSC7Q15024 291 aaKnown RBP25.78■■□□□ 1.72
CCM2-201ENST00000258781 ALDH16A1Q8IZ83 802 aa25.78■■□□□ 1.72
CCM2-201ENST00000258781 FKBP10Q96AY3 582 aa25.78■■□□□ 1.72
CCM2-201ENST00000258781 DGCR6LQ9BY27 220 aa25.78■■□□□ 1.72
CCM2-201ENST00000258781 RBCK1Q9BYM8 510 aa25.78■■□□□ 1.72
CCM2-201ENST00000258781 SPRTNQ9H040 489 aaPredicted RBP25.78■■□□□ 1.72
CCM2-201ENST00000258781 CXorf21Q9HAI6 301 aa25.78■■□□□ 1.72
CCM2-201ENST00000258781 PRTFDC1Q9NRG1 225 aa25.78■■□□□ 1.72
CCM2-201ENST00000258781 PTTG2Q9NZH5 202 aa25.78■■□□□ 1.72
CCM2-201ENST00000258781 SEMA5BQ9P283 1151 aa25.78■■□□□ 1.72
CCM2-201ENST00000258781 MKLN1Q9UL63 735 aa25.78■■□□□ 1.72
CCM2-201ENST00000258781 ZNF443Q9Y2A4 671 aaPredicted RBP25.78■■□□□ 1.72
CCM2-201ENST00000258781 PCDHGA12O60330 932 aa25.77■■□□□ 1.72
CCM2-201ENST00000258781 SYPP08247 313 aa25.77■■□□□ 1.72
CCM2-201ENST00000258781 HSD11B2P80365 405 aa25.77■■□□□ 1.72
CCM2-201ENST00000258781 RAB39AQ14964 217 aa25.77■■□□□ 1.72
CCM2-201ENST00000258781 NEDD8Q15843 81 aa25.77■■□□□ 1.72
CCM2-201ENST00000258781 DCST2Q5T1A1 773 aa25.77■■□□□ 1.72
CCM2-201ENST00000258781 Q6ZPB1 254 aaPredicted RBP25.77■■□□□ 1.72
CCM2-201ENST00000258781 GALNT12Q8IXK2 581 aa25.77■■□□□ 1.72
CCM2-201ENST00000258781 DEPDC4Q8N2C3 294 aa25.77■■□□□ 1.72
CCM2-201ENST00000258781 SLC7A13Q8TCU3 470 aa25.77■■□□□ 1.72
CCM2-201ENST00000258781 DOK4Q8TEW6 326 aa25.77■■□□□ 1.72
CCM2-201ENST00000258781 SGCDQ92629 289 aa25.77■■□□□ 1.72
CCM2-201ENST00000258781 NMD3Q96D46 503 aaKnown RBP25.77■■□□□ 1.72
CCM2-201ENST00000258781 MMABQ96EY8 250 aaPredicted RBP25.77■■□□□ 1.72
CCM2-201ENST00000258781 NODALQ96S42 347 aa25.77■■□□□ 1.72
CCM2-201ENST00000258781 UCK2Q9BZX2 261 aa25.77■■□□□ 1.72
CCM2-201ENST00000258781 SAP130Q9H0E3 1048 aa25.77■■□□□ 1.72
CCM2-201ENST00000258781 DUSP21Q9H596 190 aa25.77■■□□□ 1.72
CCM2-201ENST00000258781 PAK1IP1Q9NWT1 392 aaPredicted RBP25.77■■□□□ 1.72
CCM2-201ENST00000258781 ZNF232Q9UNY5 417 aa25.77■■□□□ 1.72
CCM2-201ENST00000258781 RNF6Q9Y252 685 aa25.77■■□□□ 1.72
CCM2-201ENST00000258781 CHST2Q9Y4C5 530 aa25.77■■□□□ 1.72
CCM2-201ENST00000258781 SNX5Q9Y5X3 404 aa25.77■■□□□ 1.72
CCM2-201ENST00000258781 OR10H3O60404 316 aa25.77■■□□□ 1.72
CCM2-201ENST00000258781 CBX7O95931 251 aa25.77■■□□□ 1.72
CCM2-201ENST00000258781 THBS1P07996 1170 aa25.77■■□□□ 1.72
CCM2-201ENST00000258781 POU2F1P14859 743 aa25.77■■□□□ 1.72
CCM2-201ENST00000258781 UGT2B15P54855 530 aa25.77■■□□□ 1.72
CCM2-201ENST00000258781 TEKQ02763 1124 aa25.77■■□□□ 1.72
CCM2-201ENST00000258781 STX4Q12846 297 aa25.77■■□□□ 1.72
CCM2-201ENST00000258781 DUSP8Q13202 625 aa25.77■■□□□ 1.72
CCM2-201ENST00000258781 LARS2Q15031 903 aaKnown RBP25.77■■□□□ 1.72
CCM2-201ENST00000258781 LAIR1Q6GTX8 287 aa25.77■■□□□ 1.72
CCM2-201ENST00000258781 B3GNT6Q6ZMB0 384 aa25.77■■□□□ 1.72
CCM2-201ENST00000258781 EID2Q8N6I1 236 aa25.77■■□□□ 1.72
CCM2-201ENST00000258781 COX18Q8N8Q8 333 aa25.77■■□□□ 1.72
CCM2-201ENST00000258781 PMM1Q92871 262 aa25.77■■□□□ 1.72
CCM2-201ENST00000258781 CNDP2Q96KP4 475 aaKnown RBP25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms