RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 SLC6A11P48066 632 aa17.94■□□□□ 0.46
PTPRE-201ENST00000254667 AKR1D1P51857 326 aa17.94■□□□□ 0.46
PTPRE-201ENST00000254667 APOFQ13790 326 aa17.94■□□□□ 0.46
PTPRE-201ENST00000254667 NKAPLQ5M9Q1 402 aa17.94■□□□□ 0.46
PTPRE-201ENST00000254667 MFSD6LQ8IWD5 586 aa17.94■□□□□ 0.46
PTPRE-201ENST00000254667 ACTR6Q9GZN1 396 aa17.94■□□□□ 0.46
PTPRE-201ENST00000254667 NMNAT1Q9HAN9 279 aaPredicted RBP17.94■□□□□ 0.46
PTPRE-201ENST00000254667 SLC35A3Q9Y2D2 325 aa17.94■□□□□ 0.46
PTPRE-201ENST00000254667 GTF2F2P13984 249 aa17.94■□□□□ 0.46
PTPRE-201ENST00000254667 C22orf42Q6IC83 251 aa17.94■□□□□ 0.46
PTPRE-201ENST00000254667 UBQLNLQ8IYU4 475 aa17.94■□□□□ 0.46
PTPRE-201ENST00000254667 OR4K13Q8NH42 304 aa17.94■□□□□ 0.46
PTPRE-201ENST00000254667 ZNF300Q96RE9 604 aaPredicted RBP17.94■□□□□ 0.46
PTPRE-201ENST00000254667 GMEB1Q9Y692 573 aa17.94■□□□□ 0.46
PTPRE-201ENST00000254667 LOC100509620A0A075B734 347 aa17.94■□□□□ 0.46
PTPRE-201ENST00000254667 CLCA1A8K7I4 914 aa17.94■□□□□ 0.46
PTPRE-201ENST00000254667 RDH16O75452 317 aa17.94■□□□□ 0.46
PTPRE-201ENST00000254667 C1SP09871 688 aa17.94■□□□□ 0.46
PTPRE-201ENST00000254667 AHRP35869 848 aa17.94■□□□□ 0.46
PTPRE-201ENST00000254667 NR0B1P51843 470 aaKnown RBP17.94■□□□□ 0.46
PTPRE-201ENST00000254667 DEFB133Q30KQ1 61 aa17.94■□□□□ 0.46
PTPRE-201ENST00000254667 FAM78AQ5JUQ0 283 aa17.94■□□□□ 0.46
PTPRE-201ENST00000254667 CTSL3PQ5NE16 218 aa17.94■□□□□ 0.46
PTPRE-201ENST00000254667 TMEM236Q5W0B7 351 aa17.94■□□□□ 0.46
PTPRE-201ENST00000254667 ZNF480Q8WV37 535 aa17.94■□□□□ 0.46
PTPRE-201ENST00000254667 POT1Q9NUX5 634 aa17.94■□□□□ 0.46
PTPRE-201ENST00000254667 DCAF13Q9NV06 445 aaKnown RBP17.94■□□□□ 0.46
PTPRE-201ENST00000254667 MROH6A6NGR9 719 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 OR2T1O43869 369 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 F3P13726 295 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 ZNF43P17038 809 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 CNR2P34972 360 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 CMPK2Q5EBM0 449 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 PLBD1Q6P4A8 553 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 WDR20Q8TBZ3 569 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 ZFAND2BQ8WV99 257 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 NANOS1Q8WY41 292 aaKnown RBP17.93■□□□□ 0.46
PTPRE-201ENST00000254667 CPNE7Q9UBL6 633 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 A6NIZ1 184 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 ANKRD28O15084 1053 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 TSPAN9O75954 239 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 ACVR1BP36896 505 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 RAP1BP61224 184 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 RAP1AP62834 184 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 HTRA3P83110 453 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 KEAP1Q14145 624 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 CDK10Q15131 360 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 OR14L1PQ8NHC6 308 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 GPR45Q9Y5Y3 372 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 A0A0U1RQS6 177 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 GFRA2O00451 464 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 CD38P28907 300 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 MECP2P51608 486 aaKnown RBP17.93■□□□□ 0.46
PTPRE-201ENST00000254667 PIGFQ07326 219 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 SF3B4Q15427 424 aaKnown RBP eCLIP17.93■□□□□ 0.46
PTPRE-201ENST00000254667 PROX2Q3B8N5 592 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 ZNF431Q8TF32 576 aaPredicted RBP17.93■□□□□ 0.46
PTPRE-201ENST00000254667 ZSCAN5BA6NJL1 495 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 ERP29P30040 261 aaKnown RBP17.93■□□□□ 0.46
PTPRE-201ENST00000254667 LCN1P31025 176 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 DCTP40126 519 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 NKX3-2P78367 333 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 CTBSQ01459 385 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 KCTD9Q7L273 389 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 FAM46BQ96A09 425 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 CHFRQ96EP1 664 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 OR10A4Q9H209 315 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 MEPEQ9NQ76 525 aaPredicted RBP17.93■□□□□ 0.46
PTPRE-201ENST00000254667 NUFIP1Q9UHK0 495 aaKnown RBP17.93■□□□□ 0.46
PTPRE-201ENST00000254667 ADAM29Q9UKF5 820 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 ST14Q9Y5Y6 855 aa17.93■□□□□ 0.46
PTPRE-201ENST00000254667 PABPC4LP0CB38 370 aaKnown RBP17.92■□□□□ 0.46
PTPRE-201ENST00000254667 CFL1P23528 166 aaKnown RBP17.92■□□□□ 0.46
PTPRE-201ENST00000254667 CRABP1P29762 137 aa17.92■□□□□ 0.46
PTPRE-201ENST00000254667 ADH7P40394 386 aa17.92■□□□□ 0.46
PTPRE-201ENST00000254667 MAGEA2P43356 314 aa17.92■□□□□ 0.46
PTPRE-201ENST00000254667 MAGEA8P43361 318 aa17.92■□□□□ 0.46
PTPRE-201ENST00000254667 VN1R2Q8NFZ6 395 aa17.92■□□□□ 0.46
PTPRE-201ENST00000254667 MSLNLQ96KJ4 702 aa17.92■□□□□ 0.46
PTPRE-201ENST00000254667 GORASP2Q9H8Y8 452 aa17.92■□□□□ 0.46
PTPRE-201ENST00000254667 EMCNQ9ULC0 261 aa17.92■□□□□ 0.46
PTPRE-201ENST00000254667 TRPM3Q9HCF6 1732 aaPredicted RBP17.92■□□□□ 0.46
PTPRE-201ENST00000254667 A0A0A6YYC8 382 aaPredicted RBP17.92■□□□□ 0.46
PTPRE-201ENST00000254667 I3L1I5 382 aaPredicted RBP17.92■□□□□ 0.46
PTPRE-201ENST00000254667 ATE1O95260 518 aa17.92■□□□□ 0.46
PTPRE-201ENST00000254667 RPS26P11Q5JNZ5 115 aaPredicted RBP17.92■□□□□ 0.46
PTPRE-201ENST00000254667 C3orf33Q6P1S2 294 aa17.92■□□□□ 0.46
PTPRE-201ENST00000254667 OR8S1Q8NH09 359 aa17.92■□□□□ 0.46
PTPRE-201ENST00000254667 RHBDD1Q8TEB9 315 aa17.92■□□□□ 0.46
PTPRE-201ENST00000254667 SEC14L5O43304 696 aa17.92■□□□□ 0.46
PTPRE-201ENST00000254667 F11P03951 625 aa17.92■□□□□ 0.46
PTPRE-201ENST00000254667 ZXDBP98169 803 aa17.92■□□□□ 0.46
PTPRE-201ENST00000254667 ARL6IP1Q15041 203 aa17.92■□□□□ 0.46
PTPRE-201ENST00000254667 BTBD16Q32M84 506 aa17.92■□□□□ 0.46
PTPRE-201ENST00000254667 BCL2L15Q5TBC7 163 aa17.92■□□□□ 0.46
PTPRE-201ENST00000254667 FOXRED2Q8IWF2 684 aa17.92■□□□□ 0.46
PTPRE-201ENST00000254667 MSANTD3Q96H12 275 aa17.92■□□□□ 0.46
PTPRE-201ENST00000254667 BIRC8Q96P09 236 aa17.92■□□□□ 0.46
PTPRE-201ENST00000254667 PHOX2BQ99453 314 aa17.92■□□□□ 0.46
PTPRE-201ENST00000254667 ZBP1Q9H171 429 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms