RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 HS6ST1O60243 411 aa13.2□□□□□ -0.3
SDF2-201ENST00000247020 BRINP1O60477 761 aa13.2□□□□□ -0.3
SDF2-201ENST00000247020 GADD45GO95257 159 aa13.2□□□□□ -0.3
SDF2-201ENST00000247020 SNAP29O95721 258 aa13.2□□□□□ -0.3
SDF2-201ENST00000247020 DBIP07108 87 aaKnown RBP13.2□□□□□ -0.3
SDF2-201ENST00000247020 ITGAMP11215 1152 aa13.2□□□□□ -0.3
SDF2-201ENST00000247020 TNNI3P19429 210 aa13.2□□□□□ -0.3
SDF2-201ENST00000247020 DCDP81605 110 aaKnown RBP13.2□□□□□ -0.3
SDF2-201ENST00000247020 OCA2Q04671 838 aa13.2□□□□□ -0.3
SDF2-201ENST00000247020 MINDY4Q4G0A6 757 aa13.2□□□□□ -0.3
SDF2-201ENST00000247020 NKAIN1Q4KMZ8 207 aa13.2□□□□□ -0.3
SDF2-201ENST00000247020 LIN52Q52LA3 116 aa13.2□□□□□ -0.3
SDF2-201ENST00000247020 COLEC12Q5KU26 742 aa13.2□□□□□ -0.3
SDF2-201ENST00000247020 MFSD4BQ5TF39 518 aa13.2□□□□□ -0.3
SDF2-201ENST00000247020 ZNF385CQ66K41 422 aaPredicted RBP13.2□□□□□ -0.3
SDF2-201ENST00000247020 PWWP2BQ6NUJ5 590 aa13.2□□□□□ -0.3
SDF2-201ENST00000247020 TCTN3Q6NUS6 607 aa13.2□□□□□ -0.3
SDF2-201ENST00000247020 WDR53Q7Z5U6 358 aaPredicted RBP13.2□□□□□ -0.3
SDF2-201ENST00000247020 LINC00471Q8N535 108 aa13.2□□□□□ -0.3
SDF2-201ENST00000247020 BMPERQ8N8U9 685 aa13.2□□□□□ -0.3
SDF2-201ENST00000247020 PIK3C3Q8NEB9 887 aa13.2□□□□□ -0.3
SDF2-201ENST00000247020 GIPC3Q8TF64 312 aa13.2□□□□□ -0.3
SDF2-201ENST00000247020 PTPMT1Q8WUK0 201 aaPredicted RBP13.2□□□□□ -0.3
SDF2-201ENST00000247020 DAZLQ92904 295 aaKnown RBP13.2□□□□□ -0.3
SDF2-201ENST00000247020 CNBD2Q96M20 576 aa13.2□□□□□ -0.3
SDF2-201ENST00000247020 SLC46A1Q96NT5 459 aa13.2□□□□□ -0.3
SDF2-201ENST00000247020 RSPO3Q9BXY4 272 aaPredicted RBP13.2□□□□□ -0.3
SDF2-201ENST00000247020 POLR2J2Q9GZM3 115 aaKnown RBP13.2□□□□□ -0.3
SDF2-201ENST00000247020 POLR2J3Q9H1A7 115 aaKnown RBP13.2□□□□□ -0.3
SDF2-201ENST00000247020 ARMC7Q9H6L4 198 aa13.2□□□□□ -0.3
SDF2-201ENST00000247020 Q9N2J8 555 aa13.2□□□□□ -0.3
SDF2-201ENST00000247020 C11orf16Q9NQ32 467 aa13.2□□□□□ -0.3
SDF2-201ENST00000247020 PNPLA3Q9NST1 481 aa13.2□□□□□ -0.3
SDF2-201ENST00000247020 ACER3Q9NUN7 267 aa13.2□□□□□ -0.3
SDF2-201ENST00000247020 TMEFF2Q9UIK5 374 aaPredicted RBP13.2□□□□□ -0.3
SDF2-201ENST00000247020 MUC3AQ02505 3323 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 TMX2-CTNND1H3BSU7 103 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 CDX4O14627 284 aaPredicted RBP13.19□□□□□ -0.3
SDF2-201ENST00000247020 FCMRO60667 390 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 CPNE3O75131 537 aaKnown RBP13.19□□□□□ -0.3
SDF2-201ENST00000247020 TNFAIP8O95379 198 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 ZIC2O95409 532 aaPredicted RBP13.19□□□□□ -0.3
SDF2-201ENST00000247020 OXSR1O95747 527 aaPredicted RBP13.19□□□□□ -0.3
SDF2-201ENST00000247020 EPPINO95925 133 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 LYNP07948 512 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 CD59P13987 128 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 IGFBP5P24593 272 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 SSTR4P31391 388 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 GABRA3P34903 492 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 CDH12P55289 794 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 PSPHP78330 225 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 MC2RQ01718 297 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 PPP1R8Q12972 351 aaKnown RBP13.19□□□□□ -0.3
SDF2-201ENST00000247020 IL18R1Q13478 541 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 COL9A2Q14055 689 aaPredicted RBP13.19□□□□□ -0.3
SDF2-201ENST00000247020 MICAQ29983 383 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 RNF220Q5VTB9 566 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 C1orf189Q5VU69 101 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 KRT80Q6KB66 452 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 TMEM151BQ8IW70 566 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 HS3ST5Q8IZT8 346 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 ZNF555Q8NEP9 628 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 PHF10Q8WUB8 498 aaKnown RBP13.19□□□□□ -0.3
SDF2-201ENST00000247020 CYGBQ8WWM9 190 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 CLIP3Q96DZ5 547 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 PRRC1Q96M27 445 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 LRFN5Q96NI6 719 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 G6PC3Q9BUM1 346 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 CNPPD1Q9BV87 410 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 SLC26A1Q9H2B4 701 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 SMURF2Q9HAU4 748 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 UBAP1Q9NZ09 502 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 AKAP7Q9P0M2 348 aaPredicted RBP13.19□□□□□ -0.3
SDF2-201ENST00000247020 KIF17Q9P2E2 1029 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 ENOPH1Q9UHY7 261 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 MKLN1Q9UL63 735 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 ZNF443Q9Y2A4 671 aaPredicted RBP13.19□□□□□ -0.3
SDF2-201ENST00000247020 PCDHGA10Q9Y5H3 936 aa13.19□□□□□ -0.3
SDF2-201ENST00000247020 ZNF318Q5VUA4 2279 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 EFCAB7A8K855 629 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 B4E171 279 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 POLR1CO15160 346 aaPredicted RBP13.18□□□□□ -0.3
SDF2-201ENST00000247020 SLC16A6O15403 523 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 LRP3O75074 770 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 KCNK2O95069 426 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 CLPSP04118 112 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 IGKV3-11P04433 115 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 NID1P14543 1247 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 IL7RP16871 459 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 IFNA8P32881 189 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 TSPAN7P41732 249 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 DAPP51397 102 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 PSMD4P55036 377 aaKnown RBP13.18□□□□□ -0.3
SDF2-201ENST00000247020 DCAF7P61962 342 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 E2F1Q01094 437 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 BLMHQ13867 455 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 CYP27C1Q4G0S4 372 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 VWA2Q5GFL6 755 aa13.18□□□□□ -0.3
SDF2-201ENST00000247020 RBM44Q6ZP01 1051 aaKnown RBP13.18□□□□□ -0.3
SDF2-201ENST00000247020 PRR23CQ6ZRP0 262 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms