RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 SLC1A3P43003 542 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 CRISP3P54108 245 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 PNLIPRP1P54315 467 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 RBMS2Q15434 407 aaKnown RBP12.22□□□□□ -0.45
VAMP4-201ENST00000236192 TMEM86AQ8N2M4 240 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 DNERQ8NFT8 737 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 OR52B6Q8NGF0 335 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 OR5AK3PQ8NH89 298 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 HMGB4Q8WW32 186 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 VPS25Q9BRG1 176 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 CTPS2Q9NRF8 586 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 GPRC5BQ9NZH0 403 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 MED6O75586 246 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 TACSTD2P09758 323 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 ELK1P19419 428 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 ACVR2AP27037 513 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 VLDLRP98155 873 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 OR4E2Q8NGC2 313 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 SPRYD4Q8WW59 207 aaPredicted RBP12.22□□□□□ -0.45
VAMP4-201ENST00000236192 SLC25A36Q96CQ1 311 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 KXD1Q9BQD3 176 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 GSKIPQ9P0R6 139 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 SNX11Q9Y5W9 270 aa12.22□□□□□ -0.45
VAMP4-201ENST00000236192 LAMB4A4D0S4 1761 aa12.21□□□□□ -0.45
VAMP4-201ENST00000236192 AKAP12Q02952 1782 aa12.21□□□□□ -0.45
VAMP4-201ENST00000236192 A0A087X0M5 115 aa12.21□□□□□ -0.45
VAMP4-201ENST00000236192 A0A1B0GX30 115 aa12.21□□□□□ -0.45
VAMP4-201ENST00000236192 A0A1W2PPK0 400 aa12.21□□□□□ -0.45
VAMP4-201ENST00000236192 PPP6CO00743 305 aa12.21□□□□□ -0.45
VAMP4-201ENST00000236192 PCDH7O60245 1069 aa12.21□□□□□ -0.45
VAMP4-201ENST00000236192 CYB5AP00167 134 aa12.21□□□□□ -0.45
VAMP4-201ENST00000236192 ACP2P11117 423 aa12.21□□□□□ -0.45
VAMP4-201ENST00000236192 CPN1P15169 458 aa12.21□□□□□ -0.45
VAMP4-201ENST00000236192 PCGF2P35227 344 aa12.21□□□□□ -0.45
VAMP4-201ENST00000236192 GIPRP48546 466 aa12.21□□□□□ -0.45
VAMP4-201ENST00000236192 KCNJ3P48549 501 aa12.21□□□□□ -0.45
VAMP4-201ENST00000236192 MBTPS1Q14703 1052 aa12.21□□□□□ -0.45
VAMP4-201ENST00000236192 RAB6CQ53S08 254 aa12.21□□□□□ -0.45
VAMP4-201ENST00000236192 GLT8D1Q68CQ7 371 aa12.21□□□□□ -0.45
VAMP4-201ENST00000236192 ABHD15Q6UXT9 468 aa12.21□□□□□ -0.45
VAMP4-201ENST00000236192 SUMF2Q8NBJ7 301 aa12.21□□□□□ -0.45
VAMP4-201ENST00000236192 TM6SF2Q9BZW4 377 aa12.21□□□□□ -0.45
VAMP4-201ENST00000236192 RAB6CQ9H0N0 254 aa12.21□□□□□ -0.45
VAMP4-201ENST00000236192 GHITMQ9H3K2 345 aa12.21□□□□□ -0.45
VAMP4-201ENST00000236192 TUBG2Q9NRH3 451 aa12.21□□□□□ -0.45
VAMP4-201ENST00000236192 TCRBV16S1A1N1A0A5B0 115 aa12.21□□□□□ -0.45
VAMP4-201ENST00000236192 HTR6P50406 440 aa12.21□□□□□ -0.45
VAMP4-201ENST00000236192 UBE2NLQ5JXB2 153 aa12.21□□□□□ -0.45
VAMP4-201ENST00000236192 SLC22A25Q6T423 547 aa12.21□□□□□ -0.45
VAMP4-201ENST00000236192 LINGO4Q6UY18 593 aa12.21□□□□□ -0.45
VAMP4-201ENST00000236192 MRPL41Q8IXM3 137 aaKnown RBP12.21□□□□□ -0.45
VAMP4-201ENST00000236192 IQCF1Q8N6M8 205 aa12.21□□□□□ -0.45
VAMP4-201ENST00000236192 PITX2Q99697 317 aa12.21□□□□□ -0.45
VAMP4-201ENST00000236192 MRI1Q9BV20 369 aa12.21□□□□□ -0.45
VAMP4-201ENST00000236192 MYNNQ9NPC7 610 aa12.21□□□□□ -0.45
VAMP4-201ENST00000236192 PIGVQ9NUD9 493 aa12.21□□□□□ -0.45
VAMP4-201ENST00000236192 MFSD2BA6NFX1 497 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 I6L893 689 aaPredicted RBP12.21□□□□□ -0.46
VAMP4-201ENST00000236192 HLA-DQA2P01906 255 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 SLC2A5P22732 501 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 PBLDP30039 288 aaPredicted RBP12.21□□□□□ -0.46
VAMP4-201ENST00000236192 ACVR1BP36896 505 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 OR2B8PP59922 312 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 ACTBP60709 375 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 ACTG1P63261 375 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 OC90Q02509 493 aaPredicted RBP12.21□□□□□ -0.46
VAMP4-201ENST00000236192 HLXQ14774 488 aaPredicted RBP12.21□□□□□ -0.46
VAMP4-201ENST00000236192 ZNF585AQ6P3V2 769 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 SLC29A4Q7RTT9 530 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 TMEM179BQ7Z7N9 219 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 GPR152Q8TDT2 470 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 OR5B12Q96R08 314 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 CPPED1Q9BRF8 314 aaPredicted RBP12.21□□□□□ -0.46
VAMP4-201ENST00000236192 MINDY3Q9H8M7 445 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 FKBPLQ9UIM3 349 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 CAMK2AQ9UQM7 478 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 COL1A1P02452 1464 aaPredicted RBP12.21□□□□□ -0.46
VAMP4-201ENST00000236192 URADA6NGE7 173 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 FXYD1O00168 92 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 NPM3O75607 178 aaKnown RBP12.21□□□□□ -0.46
VAMP4-201ENST00000236192 SCGB1D1O95968 90 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 AKAIN1P0CW23 69 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 IFNGR1P15260 489 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 CXCR3P49682 368 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 CCR9P51686 369 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 ACTC1P68032 377 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 ACTA1P68133 377 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 RPL19P84098 196 aaKnown RBP12.21□□□□□ -0.46
VAMP4-201ENST00000236192 PRKCZQ05513 592 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 CRHR2Q13324 411 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 OR2G6Q5TZ20 316 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 NOXRED1Q6NXP6 359 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 LILRB2Q8N423 598 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 C15orf54Q8N8G6 183 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 HASPINQ8TF76 798 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 CPNE4Q96A23 557 aaPredicted RBP12.21□□□□□ -0.46
VAMP4-201ENST00000236192 RNF31Q96EP0 1072 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 GPR78Q96P69 363 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 CDC6Q99741 560 aa12.21□□□□□ -0.46
VAMP4-201ENST00000236192 EDEM2Q9BV94 578 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms