RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Atp13a2Q9CTG6 1169 aa8.52□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Bbs10Q9DBI2 713 aa8.52□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Slco1c1Q9ERB5 715 aa8.52□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Slc28a3Q9ERH8 703 aa8.52□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Fads3Q9JJE7 449 aa8.52□□□□□ -1.05
Upf3b-201ENSMUST00000076265 4930469K13RikA0A286YDB2 92 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Mettl23A2AA28 253 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Vmn2r110E9PWD5 858 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Olfr194L7N1Y8 306 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Gm5724L7N264 670 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 MlxO08609 298 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 NnmtO55239 264 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Ccdc153P0C7Q1 202 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Mthfd2P18155 350 aaKnown RBP8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Ugt1a2P70691 533 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Pax5Q02650 391 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Gsdmc4Q3TR54 480 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Cdcp1Q5U462 833 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 HepacamQ640R3 418 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Nqo1Q64669 274 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Znf511Q6P0X2 227 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Alg8Q6P8H8 526 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Ldoc1Q7TPY9 151 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Olfr1173Q7TR24 312 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Flrt2Q8BLU0 660 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Aifm2Q8BUE4 373 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Caps2Q8BUG5 550 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Samd7Q8C8Y5 445 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Gsdmc3Q8CB12 480 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 NraddQ8CJ26 228 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Angptl8Q8R1L8 198 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Sirt4Q8R216 333 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Olfr561Q8VGZ6 314 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Vmn1r45Q8VIC7 318 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Znf639Q99KZ6 485 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Cstf1Q99LC2 431 aaKnown RBP8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Znf281Q99LI5 893 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Uck2Q99PM9 261 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Q9D727 114 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Arpp21Q9DCB4 807 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Nxt1Q9QZV9 140 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Dyrk1bQ9Z188 629 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Myh13B1AR69 1938 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 RptorQ8K4Q0 1335 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Rsg1A2A825 258 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Ttc23lA6H6E9 458 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Siah3B2RWG3 268 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Izumo4D3Z690 227 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Eid2bE9Q2Y0 151 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Vmn2r105E9Q3A5 860 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Gm5134E9QAB5 671 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Susd5G3UW60 619 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Gm20403G3UYB0 123 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 9130019O22RikG3X941 543 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Ring1O35730 406 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Gp1baO35930 734 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Cdh3P10287 822 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 PlatP11214 559 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Klkb1P26262 638 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 WarsP32921 481 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Gstm5P48774 224 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 ApodP51910 189 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 OsmP53347 263 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 PhbP67778 272 aaKnown RBP8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 PrtgQ2EY15 1191 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Senp5Q6NXL6 749 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Fblim1Q71FD7 375 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Abcg2Q7TMS5 657 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 CyrenQ8BHZ5 157 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Zfp101Q8BP18 612 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 GmdsQ8K0C9 372 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Fn3krpQ8K274 309 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Asz1Q8VD46 475 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Chrdl2Q8VEA6 426 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Oas3Q8VI93 1138 aaKnown RBP8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 ScgnQ91WD9 276 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Syt12Q920N7 421 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Cdk9Q99J95 372 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Pfdn1Q9CWM4 122 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Oxct1Q9D0K2 520 aaKnown RBP8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Ebna1bp2Q9D903 306 aaKnown RBP8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Stard10Q9JMD3 291 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Fhl3Q9R059 289 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Gm5493S4R2D1 92 aa8.51□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Serpina3iD3Z450 408 aa8.5□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Gm8113E0CXS8 587 aa8.5□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Psmd4O35226 376 aaKnown RBP8.5□□□□□ -1.05
Upf3b-201ENSMUST00000076265 St8sia2O35696 375 aa8.5□□□□□ -1.05
Upf3b-201ENSMUST00000076265 HckP08103 524 aa8.5□□□□□ -1.05
Upf3b-201ENSMUST00000076265 UbbP0CG49 305 aa8.5□□□□□ -1.05
Upf3b-201ENSMUST00000076265 UbcP0CG50 734 aaKnown RBP8.5□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Mcpt4P21812 246 aa8.5□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Sat1P48026 171 aa8.5□□□□□ -1.05
Upf3b-201ENSMUST00000076265 EpxP49290 716 aa8.5□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Clcn3P51791 818 aa8.5□□□□□ -1.05
Upf3b-201ENSMUST00000076265 SPINDOCQ05AH6 381 aa8.5□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Fam172aQ3TNH5 417 aa8.5□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Dnaaf3Q3UYV8 586 aa8.5□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Zbtb45Q52KG4 520 aa8.5□□□□□ -1.05
Upf3b-201ENSMUST00000076265 EsrrbQ61539 433 aa8.5□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 35.2 ms