RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 GSC2O15499 205 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 ZNF806P0C7X5 589 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 NCK1P16333 377 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 LORP23490 312 aaPredicted RBP6.73□□□□□ -1.33
NECAP1-220ENST00000639841 FCARP24071 287 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 PTGS2P35354 604 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 THOP1P52888 689 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 IL10RBQ08334 325 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 ILF2Q12905 390 aaKnown RBP6.73□□□□□ -1.33
NECAP1-220ENST00000639841 PPP6R3Q5H9R7 873 aaPredicted RBP6.73□□□□□ -1.33
NECAP1-220ENST00000639841 MLIPQ5VWP3 458 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 WSCD1Q658N2 575 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 PRR23BQ6ZRT6 265 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 LINC00523Q86TU6 105 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 SLC22A16Q86VW1 577 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 CCDC36Q8IYA8 594 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 TMEM123Q8N131 208 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 EMC1Q8N766 993 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 FAM86B1Q8N7N1 296 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 ABHD11Q8NFV4 315 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 MZB1Q8WU39 189 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 MAIP1Q8WWC4 291 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 TMEM45BQ96B21 275 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 SGK3Q96BR1 496 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 RAB39BQ96DA2 213 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 TSSK2Q96PF2 358 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 LHPPQ9H008 270 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 ZNF334Q9HCZ1 680 aaPredicted RBP6.73□□□□□ -1.33
NECAP1-220ENST00000639841 CHRAC1Q9NRG0 131 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 PTTG2Q9NZH5 202 aa6.73□□□□□ -1.33
NECAP1-220ENST00000639841 TMEM150CB9EJG8 249 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 ZSCAN12O43309 604 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 CDC14BO60729 498 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 CLDN7O95471 211 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 CLPTM1O96005 669 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 MBP02144 154 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 APOA1P02647 267 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 KRT19P08727 400 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 AMD1P17707 334 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 BMP5P22003 454 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 RAB9AP51151 201 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 PGGT1BP53609 377 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 P2RX3P56373 397 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 NXPH1P58417 271 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 YWHAEP62258 255 aaKnown RBP6.72□□□□□ -1.33
NECAP1-220ENST00000639841 SULT2A1Q06520 285 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 FAM27E3Q08E93 113 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 MAD2L1Q13257 205 aaPredicted RBP6.72□□□□□ -1.33
NECAP1-220ENST00000639841 ILKQ13418 452 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 CDH18Q13634 790 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 GRM7Q14831 915 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 TGFBIQ15582 683 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 SLC25A53Q5H9E4 307 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 NCAPH2Q6IBW4 605 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 ARMC6Q6NXE6 501 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 TMEM53Q6P2H8 277 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 ITIH5Q86UX2 942 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 VRK2Q86Y07 508 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 RNF10Q8N5U6 811 aaKnown RBP6.72□□□□□ -1.33
NECAP1-220ENST00000639841 NDNFQ8TB73 568 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 ITFG1Q8TB96 612 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 GIPC3Q8TF64 312 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 KIFAP3Q92845 792 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 SLCO2A1Q92959 643 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 TRNT1Q96Q11 434 aaKnown RBP6.72□□□□□ -1.33
NECAP1-220ENST00000639841 TIPINQ9BVW5 301 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 FSD1LQ9BXM9 530 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 POLR3FQ9H1D9 316 aaPredicted RBP6.72□□□□□ -1.33
NECAP1-220ENST00000639841 PARD6AQ9NPB6 346 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 SMOXQ9NWM0 555 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 RCC2Q9P258 522 aaKnown RBP6.72□□□□□ -1.33
NECAP1-220ENST00000639841 CACNA1IQ9P0X4 2223 aa6.72□□□□□ -1.33
NECAP1-220ENST00000639841 NUP210Q8TEM1 1887 aaPredicted RBP6.72□□□□□ -1.33
NECAP1-220ENST00000639841 A0A1W2PPV4 95 aa6.71□□□□□ -1.33
NECAP1-220ENST00000639841 CD8B2A6NJW9 211 aa6.71□□□□□ -1.33
NECAP1-220ENST00000639841 DIRC3C9JPN6 131 aa6.71□□□□□ -1.33
NECAP1-220ENST00000639841 CHUKO15111 745 aa6.71□□□□□ -1.33
NECAP1-220ENST00000639841 RNASE1P07998 156 aaKnown RBP6.71□□□□□ -1.33
NECAP1-220ENST00000639841 DGKAP23743 735 aa6.71□□□□□ -1.33
NECAP1-220ENST00000639841 RARRES1P49788 294 aa6.71□□□□□ -1.33
NECAP1-220ENST00000639841 TPMTP51580 245 aa6.71□□□□□ -1.33
NECAP1-220ENST00000639841 CCNHP51946 323 aaPredicted RBP6.71□□□□□ -1.33
NECAP1-220ENST00000639841 CDH4P55283 916 aa6.71□□□□□ -1.33
NECAP1-220ENST00000639841 SLC3A1Q07837 685 aa6.71□□□□□ -1.33
NECAP1-220ENST00000639841 ASPHQ12797 758 aa6.71□□□□□ -1.33
NECAP1-220ENST00000639841 SMARCB1Q12824 385 aa6.71□□□□□ -1.33
NECAP1-220ENST00000639841 NFATC2Q13469 925 aa6.71□□□□□ -1.33
NECAP1-220ENST00000639841 RAET1LQ5VY80 246 aa6.71□□□□□ -1.33
NECAP1-220ENST00000639841 NAIF1Q69YI7 327 aaPredicted RBP6.71□□□□□ -1.33
NECAP1-220ENST00000639841 DCDC5Q6ZRR9 648 aa6.71□□□□□ -1.33
NECAP1-220ENST00000639841 THAP8Q8NA92 274 aa6.71□□□□□ -1.33
NECAP1-220ENST00000639841 BHLHE22Q8NFJ8 381 aaPredicted RBP6.71□□□□□ -1.33
NECAP1-220ENST00000639841 ST8SIA1Q92185 356 aa6.71□□□□□ -1.33
NECAP1-220ENST00000639841 CPB2Q96IY4 423 aa6.71□□□□□ -1.33
NECAP1-220ENST00000639841 TECTBQ96PL2 329 aa6.71□□□□□ -1.33
NECAP1-220ENST00000639841 KCNS3Q9BQ31 491 aa6.71□□□□□ -1.33
NECAP1-220ENST00000639841 GALNT9Q9HCQ5 603 aa6.71□□□□□ -1.33
NECAP1-220ENST00000639841 XPNPEP1Q9NQW7 623 aa6.71□□□□□ -1.33
NECAP1-220ENST00000639841 HEBP1Q9NRV9 189 aa6.71□□□□□ -1.33
NECAP1-220ENST00000639841 MIOSQ9NXC5 875 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms