RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 CDC40O60508 579 aaKnown RBP eCLIP11.68□□□□□ -0.54
CTSD-208ENST00000636843 ZFAND5O76080 213 aa11.68□□□□□ -0.54
CTSD-208ENST00000636843 RFC3P40938 356 aa11.68□□□□□ -0.54
CTSD-208ENST00000636843 SSR4P51571 173 aa11.68□□□□□ -0.54
CTSD-208ENST00000636843 RAB38P57729 211 aa11.68□□□□□ -0.54
CTSD-208ENST00000636843 KRTAP10-9P60411 292 aa11.68□□□□□ -0.54
CTSD-208ENST00000636843 HMGCS1Q01581 520 aa11.68□□□□□ -0.54
CTSD-208ENST00000636843 CSTF3Q12996 717 aaKnown RBP11.68□□□□□ -0.54
CTSD-208ENST00000636843 RUNX2Q13950 521 aa11.68□□□□□ -0.54
CTSD-208ENST00000636843 CAPRIN1Q14444 709 aaKnown RBP11.68□□□□□ -0.54
CTSD-208ENST00000636843 KIAA0040Q15053 153 aa11.68□□□□□ -0.54
CTSD-208ENST00000636843 GRAMD1BQ3KR37 738 aa11.68□□□□□ -0.54
CTSD-208ENST00000636843 SGO1Q5FBB7 561 aa11.68□□□□□ -0.54
CTSD-208ENST00000636843 ARHGAP11AQ6P4F7 1023 aa11.68□□□□□ -0.54
CTSD-208ENST00000636843 SLCO4C1Q6ZQN7 724 aa11.68□□□□□ -0.54
CTSD-208ENST00000636843 MDGA2Q7Z553 956 aa11.68□□□□□ -0.54
CTSD-208ENST00000636843 CDH24Q86UP0 819 aa11.68□□□□□ -0.54
CTSD-208ENST00000636843 KRT78Q8N1N4 520 aa11.68□□□□□ -0.54
CTSD-208ENST00000636843 LIX1Q8N485 282 aa11.68□□□□□ -0.54
CTSD-208ENST00000636843 NCLNQ969V3 563 aa11.68□□□□□ -0.54
CTSD-208ENST00000636843 ACPTQ9BZG2 426 aa11.68□□□□□ -0.54
CTSD-208ENST00000636843 PITHD1Q9GZP4 211 aaPredicted RBP11.68□□□□□ -0.54
CTSD-208ENST00000636843 VCXQ9H320 206 aa11.68□□□□□ -0.54
CTSD-208ENST00000636843 TP63Q9H3D4 680 aaPredicted RBP11.68□□□□□ -0.54
CTSD-208ENST00000636843 ALG2Q9H553 416 aa11.68□□□□□ -0.54
CTSD-208ENST00000636843 NT5DC2Q9H857 520 aa11.68□□□□□ -0.54
CTSD-208ENST00000636843 PRTFDC1Q9NRG1 225 aa11.68□□□□□ -0.54
CTSD-208ENST00000636843 ARMC1Q9NVT9 282 aa11.68□□□□□ -0.54
CTSD-208ENST00000636843 ZNF223Q9UK11 482 aaPredicted RBP11.68□□□□□ -0.54
CTSD-208ENST00000636843 CNOT11Q9UKZ1 510 aaKnown RBP11.68□□□□□ -0.54
CTSD-208ENST00000636843 MRPS33Q9Y291 106 aaKnown RBP11.68□□□□□ -0.54
CTSD-208ENST00000636843 AP3M1Q9Y2T2 418 aa11.68□□□□□ -0.54
CTSD-208ENST00000636843 HIVEP1P15822 2718 aa11.67□□□□□ -0.54
CTSD-208ENST00000636843 MAGEA13PA6NCF6 341 aa11.67□□□□□ -0.54
CTSD-208ENST00000636843 LRIT2A6NDA9 550 aa11.67□□□□□ -0.54
CTSD-208ENST00000636843 CLGNO14967 610 aa11.67□□□□□ -0.54
CTSD-208ENST00000636843 ERI3O43414 337 aaKnown RBP11.67□□□□□ -0.54
CTSD-208ENST00000636843 B3GALT2O43825 422 aa11.67□□□□□ -0.54
CTSD-208ENST00000636843 KCNH1O95259 989 aa11.67□□□□□ -0.54
CTSD-208ENST00000636843 UQCRBP14927 111 aa11.67□□□□□ -0.54
CTSD-208ENST00000636843 CHRNB4P30926 498 aa11.67□□□□□ -0.54
CTSD-208ENST00000636843 GPR143P51810 404 aa11.67□□□□□ -0.54
CTSD-208ENST00000636843 IRF8Q02556 426 aa11.67□□□□□ -0.54
CTSD-208ENST00000636843 SLC13A2Q13183 592 aa11.67□□□□□ -0.54
CTSD-208ENST00000636843 CHIT1Q13231 466 aa11.67□□□□□ -0.54
CTSD-208ENST00000636843 TESK1Q15569 626 aa11.67□□□□□ -0.54
CTSD-208ENST00000636843 LRRC36Q1X8D7 754 aa11.67□□□□□ -0.54
CTSD-208ENST00000636843 FRG2Q64ET8 278 aa11.67□□□□□ -0.54
CTSD-208ENST00000636843 NANOGP8Q6NSW7 305 aa11.67□□□□□ -0.54
CTSD-208ENST00000636843 TMIGD1Q6UXZ0 262 aa11.67□□□□□ -0.54
CTSD-208ENST00000636843 SPNS3Q6ZMD2 512 aa11.67□□□□□ -0.54
CTSD-208ENST00000636843 ZNF595Q8IYB9 648 aa11.67□□□□□ -0.54
CTSD-208ENST00000636843 TMEM132CQ8N3T6 1108 aa11.67□□□□□ -0.54
CTSD-208ENST00000636843 OR8J3Q8NGG0 315 aa11.67□□□□□ -0.54
CTSD-208ENST00000636843 LILRB4Q8NHJ6 448 aa11.67□□□□□ -0.54
CTSD-208ENST00000636843 RND1Q92730 232 aa11.67□□□□□ -0.54
CTSD-208ENST00000636843 MS4A6EQ96DS6 147 aa11.67□□□□□ -0.54
CTSD-208ENST00000636843 METTL2AQ96IZ6 378 aaKnown RBP11.67□□□□□ -0.54
CTSD-208ENST00000636843 FRG2BQ96QU4 278 aa11.67□□□□□ -0.54
CTSD-208ENST00000636843 PKP2Q99959 881 aa11.67□□□□□ -0.54
CTSD-208ENST00000636843 KCTD14Q9BQ13 255 aaPredicted RBP11.67□□□□□ -0.54
CTSD-208ENST00000636843 NANOGQ9H9S0 305 aa11.67□□□□□ -0.54
CTSD-208ENST00000636843 ADAP2Q9NPF8 381 aa11.67□□□□□ -0.54
CTSD-208ENST00000636843 GPRC5BQ9NZH0 403 aa11.67□□□□□ -0.54
CTSD-208ENST00000636843 ERVK-11Q9UQG0 969 aa11.67□□□□□ -0.54
CTSD-208ENST00000636843 CLDN16Q9Y5I7 305 aa11.67□□□□□ -0.54
CTSD-208ENST00000636843 HRH3Q9Y5N1 445 aa11.67□□□□□ -0.54
CTSD-208ENST00000636843 SNX13Q9Y5W8 968 aa11.67□□□□□ -0.54
CTSD-208ENST00000636843 A8MVJ9 347 aa11.66□□□□□ -0.54
CTSD-208ENST00000636843 H0YJX3 145 aa11.66□□□□□ -0.54
CTSD-208ENST00000636843 CLEC3AO75596 197 aa11.66□□□□□ -0.54
CTSD-208ENST00000636843 UMPSP11172 480 aa11.66□□□□□ -0.54
CTSD-208ENST00000636843 BCKDHAP12694 445 aa11.66□□□□□ -0.54
CTSD-208ENST00000636843 HSD3B1P14060 373 aa11.66□□□□□ -0.54
CTSD-208ENST00000636843 HSD3B2P26439 372 aa11.66□□□□□ -0.54
CTSD-208ENST00000636843 CASP2P42575 452 aa11.66□□□□□ -0.54
CTSD-208ENST00000636843 HSPA13P48723 471 aa11.66□□□□□ -0.54
CTSD-208ENST00000636843 GSK3BP49841 420 aa11.66□□□□□ -0.54
CTSD-208ENST00000636843 AQP4P55087 323 aa11.66□□□□□ -0.54
CTSD-208ENST00000636843 CLDN8P56748 225 aa11.66□□□□□ -0.54
CTSD-208ENST00000636843 GPR85P60893 370 aa11.66□□□□□ -0.54
CTSD-208ENST00000636843 LIPEQ05469 1076 aa11.66□□□□□ -0.54
CTSD-208ENST00000636843 SLBPQ14493 270 aaKnown RBP eCLIP11.66□□□□□ -0.54
CTSD-208ENST00000636843 ELAVL1Q15717 326 aaKnown RBP11.66□□□□□ -0.54
CTSD-208ENST00000636843 GRHL2Q6ISB3 625 aa11.66□□□□□ -0.54
CTSD-208ENST00000636843 SLC2A7Q6PXP3 512 aa11.66□□□□□ -0.54
CTSD-208ENST00000636843 DLEU7Q6UYE1 221 aa11.66□□□□□ -0.54
CTSD-208ENST00000636843 CYP2R1Q6VVX0 501 aa11.66□□□□□ -0.54
CTSD-208ENST00000636843 LILRA2Q8N149 483 aa11.66□□□□□ -0.54
CTSD-208ENST00000636843 MARVELD2Q8N4S9 558 aa11.66□□□□□ -0.54
CTSD-208ENST00000636843 PSD4Q8NDX1 1056 aa11.66□□□□□ -0.54
CTSD-208ENST00000636843 OR52N2Q8NGI0 321 aa11.66□□□□□ -0.54
CTSD-208ENST00000636843 QRFPRQ96P65 431 aa11.66□□□□□ -0.54
CTSD-208ENST00000636843 CGREF1Q99674 301 aa11.66□□□□□ -0.54
CTSD-208ENST00000636843 Q9H521 79 aa11.66□□□□□ -0.54
CTSD-208ENST00000636843 CCM2LQ9NUG4 571 aaPredicted RBP11.66□□□□□ -0.54
CTSD-208ENST00000636843 HPF1Q9NWY4 346 aa11.66□□□□□ -0.54
CTSD-208ENST00000636843 KCMF1Q9P0J7 381 aa11.66□□□□□ -0.54
CTSD-208ENST00000636843 CELSR1Q9NYQ6 3014 aa11.66□□□□□ -0.54
CTSD-208ENST00000636843 A0A0G2JN53 185 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms