RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 ZBP1Q9H171 429 aa10.78□□□□□ -0.68
CLIP1-219ENST00000620786 NELFAQ9H3P2 528 aa10.78□□□□□ -0.68
CLIP1-219ENST00000620786 LRRN3Q9H3W5 708 aa10.78□□□□□ -0.68
CLIP1-219ENST00000620786 NUDT15Q9NV35 164 aa10.78□□□□□ -0.68
CLIP1-219ENST00000620786 EURLQ9NYK6 297 aa10.78□□□□□ -0.68
CLIP1-219ENST00000620786 FBXL3Q9UKT7 428 aa10.78□□□□□ -0.68
CLIP1-219ENST00000620786 BAIAP2Q9UQB8 552 aa10.78□□□□□ -0.68
CLIP1-219ENST00000620786 LRRC42Q9Y546 428 aa10.78□□□□□ -0.68
CLIP1-219ENST00000620786 LINC01553A4QN01 128 aa10.78□□□□□ -0.68
CLIP1-219ENST00000620786 SULT2B1O00204 365 aa10.78□□□□□ -0.68
CLIP1-219ENST00000620786 EEF1A1P68104 462 aaKnown RBP10.78□□□□□ -0.68
CLIP1-219ENST00000620786 NPRL3Q12980 569 aa10.78□□□□□ -0.68
CLIP1-219ENST00000620786 TUBA3CQ13748 450 aa10.78□□□□□ -0.68
CLIP1-219ENST00000620786 OR7A5Q15622 319 aa10.78□□□□□ -0.68
CLIP1-219ENST00000620786 FAM205BPQ63HN1 556 aa10.78□□□□□ -0.68
CLIP1-219ENST00000620786 OR52R1Q8NGF1 315 aa10.78□□□□□ -0.68
CLIP1-219ENST00000620786 MYLIPQ8WY64 445 aa10.78□□□□□ -0.68
CLIP1-219ENST00000620786 NECAB3Q96P71 396 aaPredicted RBP10.78□□□□□ -0.68
CLIP1-219ENST00000620786 KATNBL1Q9H079 304 aa10.78□□□□□ -0.68
CLIP1-219ENST00000620786 TUBA8Q9NY65 449 aaPredicted RBP10.78□□□□□ -0.68
CLIP1-219ENST00000620786 IL17CQ9P0M4 197 aa10.78□□□□□ -0.68
CLIP1-219ENST00000620786 SLC7A7Q9UM01 511 aa10.78□□□□□ -0.68
CLIP1-219ENST00000620786 EGFP01133 1207 aa10.78□□□□□ -0.68
CLIP1-219ENST00000620786 IGHEP01854 428 aa10.78□□□□□ -0.68
CLIP1-219ENST00000620786 CSNK1DP48730 415 aa10.78□□□□□ -0.68
CLIP1-219ENST00000620786 VASPP50552 380 aaPredicted RBP10.78□□□□□ -0.68
CLIP1-219ENST00000620786 AFF3P51826 1226 aaKnown RBP10.78□□□□□ -0.68
CLIP1-219ENST00000620786 CSNK2A1P68400 391 aaPredicted RBP10.78□□□□□ -0.68
CLIP1-219ENST00000620786 ZNF252P-AS1Q0IIN9 211 aa10.78□□□□□ -0.68
CLIP1-219ENST00000620786 TMPRSS12Q86WS5 348 aa10.78□□□□□ -0.68
CLIP1-219ENST00000620786 OR8H3Q8N146 312 aa10.78□□□□□ -0.68
CLIP1-219ENST00000620786 AGBL5Q8NDL9 886 aa10.78□□□□□ -0.68
CLIP1-219ENST00000620786 ZNF675Q8TD23 568 aa10.78□□□□□ -0.68
CLIP1-219ENST00000620786 GATAD2BQ8WXI9 593 aa10.78□□□□□ -0.68
CLIP1-219ENST00000620786 SLC6A7Q99884 636 aa10.78□□□□□ -0.68
CLIP1-219ENST00000620786 ACTR6Q9GZN1 396 aa10.78□□□□□ -0.68
CLIP1-219ENST00000620786 AP1M2Q9Y6Q5 423 aa10.78□□□□□ -0.68
CLIP1-219ENST00000620786 ISPDA4D126 451 aa10.77□□□□□ -0.68
CLIP1-219ENST00000620786 E7ESA3 106 aa10.77□□□□□ -0.68
CLIP1-219ENST00000620786 YY2O15391 372 aa10.77□□□□□ -0.68
CLIP1-219ENST00000620786 XPNPEP2O43895 674 aa10.77□□□□□ -0.68
CLIP1-219ENST00000620786 TYROBPO43914 113 aa10.77□□□□□ -0.68
CLIP1-219ENST00000620786 PPP1R3DO95685 299 aa10.77□□□□□ -0.68
CLIP1-219ENST00000620786 CELP19835 753 aa10.77□□□□□ -0.68
CLIP1-219ENST00000620786 TNFSF4P23510 183 aa10.77□□□□□ -0.68
CLIP1-219ENST00000620786 EIF2S3P41091 472 aaKnown RBP10.77□□□□□ -0.68
CLIP1-219ENST00000620786 DAP3P51398 398 aaKnown RBP10.77□□□□□ -0.68
CLIP1-219ENST00000620786 SHHQ15465 462 aa10.77□□□□□ -0.68
CLIP1-219ENST00000620786 TRIM61Q5EBN2 209 aa10.77□□□□□ -0.68
CLIP1-219ENST00000620786 ARSKQ6UWY0 536 aa10.77□□□□□ -0.68
CLIP1-219ENST00000620786 SCML4Q8N228 414 aa10.77□□□□□ -0.68
CLIP1-219ENST00000620786 CNIH3Q8TBE1 160 aa10.77□□□□□ -0.68
CLIP1-219ENST00000620786 MSANTD3Q96H12 275 aa10.77□□□□□ -0.68
CLIP1-219ENST00000620786 CCDC106Q9BWC9 280 aa10.77□□□□□ -0.68
CLIP1-219ENST00000620786 CUTCQ9NTM9 273 aa10.77□□□□□ -0.68
CLIP1-219ENST00000620786 PCDHB10Q9UN67 800 aa10.77□□□□□ -0.68
CLIP1-219ENST00000620786 WASH4PA8MWX3 477 aa10.77□□□□□ -0.68
CLIP1-219ENST00000620786 UGDHO60701 494 aa10.77□□□□□ -0.68
CLIP1-219ENST00000620786 CNOT4O95628 575 aaKnown RBP10.77□□□□□ -0.68
CLIP1-219ENST00000620786 GTF2F2P13984 249 aa10.77□□□□□ -0.68
CLIP1-219ENST00000620786 HLA-FP30511 346 aa10.77□□□□□ -0.68
CLIP1-219ENST00000620786 CRISP1P54107 249 aa10.77□□□□□ -0.68
CLIP1-219ENST00000620786 MFSD13AQ14CX5 517 aa10.77□□□□□ -0.68
CLIP1-219ENST00000620786 ZBED5Q49AG3 693 aa10.77□□□□□ -0.68
CLIP1-219ENST00000620786 LIPKQ5VXJ0 399 aa10.77□□□□□ -0.68
CLIP1-219ENST00000620786 LHFPL3Q86UP9 236 aa10.77□□□□□ -0.68
CLIP1-219ENST00000620786 RCBTB1Q8NDN9 531 aa10.77□□□□□ -0.68
CLIP1-219ENST00000620786 NEIL2Q969S2 332 aa10.77□□□□□ -0.68
CLIP1-219ENST00000620786 SLC25A44Q96H78 314 aaPredicted RBP10.77□□□□□ -0.68
CLIP1-219ENST00000620786 SACM1LQ9NTJ5 587 aa10.77□□□□□ -0.68
CLIP1-219ENST00000620786 SEC14L4Q9UDX3 406 aa10.77□□□□□ -0.68
CLIP1-219ENST00000620786 NUP50Q9UKX7 468 aa10.77□□□□□ -0.68
CLIP1-219ENST00000620786 ARHGEF15O94989 841 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 LCATP04180 440 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 F3P13726 295 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 ELK4P28324 431 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 ARL3P36405 182 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 GMPRP36959 345 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 SH3BP2P78314 561 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 EIF2B1Q14232 305 aaKnown RBP10.77□□□□□ -0.69
CLIP1-219ENST00000620786 KDELC1Q6UW63 502 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 TMEM184AQ6ZMB5 413 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 MRPL21Q7Z2W9 205 aaKnown RBP10.77□□□□□ -0.69
CLIP1-219ENST00000620786 NRMQ8IXM6 262 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 GPR150Q8NGU9 434 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 MFSD8Q8NHS3 518 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 MAL2Q969L2 176 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 FKBP10Q96AY3 582 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 ARL5BQ96KC2 179 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 RTP3Q9BQQ7 232 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 UCKL1Q9NWZ5 548 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 ALG5Q9Y673 324 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 AURKAO14965 403 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 RGS9O75916 674 aaPredicted RBP10.77□□□□□ -0.69
CLIP1-219ENST00000620786 MAS1P04201 325 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 PNMTP11086 282 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 AFF1P51825 1210 aaKnown RBP10.77□□□□□ -0.69
CLIP1-219ENST00000620786 CTSCP53634 463 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 TUBA1BP68363 451 aa10.77□□□□□ -0.69
CLIP1-219ENST00000620786 TUBA4AP68366 448 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms