RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 VWA5B2Q8N398 1253 aa10.18□□□□□ -0.78
TARDBP-221ENST00000619555 CDYL2Q8N8U2 506 aa10.18□□□□□ -0.78
TARDBP-221ENST00000619555 FAM83FQ8NEG4 500 aaPredicted RBP10.18□□□□□ -0.78
TARDBP-221ENST00000619555 C17orf47Q8NEP4 570 aa10.18□□□□□ -0.78
TARDBP-221ENST00000619555 FAM222BQ8WU58 562 aa10.18□□□□□ -0.78
TARDBP-221ENST00000619555 SELENOMQ8WWX9 145 aa10.18□□□□□ -0.78
TARDBP-221ENST00000619555 NINJ1Q92982 152 aa10.18□□□□□ -0.78
TARDBP-221ENST00000619555 ABTB1Q969K4 478 aaPredicted RBP10.18□□□□□ -0.78
TARDBP-221ENST00000619555 OMA1Q96E52 524 aa10.18□□□□□ -0.78
TARDBP-221ENST00000619555 CCDC126Q96EE4 140 aa10.18□□□□□ -0.78
TARDBP-221ENST00000619555 FOXC2Q99958 501 aa10.18□□□□□ -0.78
TARDBP-221ENST00000619555 TMUB1Q9BVT8 246 aa10.18□□□□□ -0.78
TARDBP-221ENST00000619555 GATA5Q9BWX5 397 aaPredicted RBP10.18□□□□□ -0.78
TARDBP-221ENST00000619555 SHCBP1LQ9BZQ2 653 aa10.18□□□□□ -0.78
TARDBP-221ENST00000619555 CXXC4Q9H2H0 198 aa10.18□□□□□ -0.78
TARDBP-221ENST00000619555 METTL7AQ9H8H3 244 aa10.18□□□□□ -0.78
TARDBP-221ENST00000619555 TMBIM4Q9HC24 238 aa10.18□□□□□ -0.78
TARDBP-221ENST00000619555 EHD3Q9NZN3 535 aa10.18□□□□□ -0.78
TARDBP-221ENST00000619555 SENP1Q9P0U3 644 aa10.18□□□□□ -0.78
TARDBP-221ENST00000619555 ZNF629Q9UEG4 869 aaPredicted RBP10.18□□□□□ -0.78
TARDBP-221ENST00000619555 ZNF639Q9UID6 485 aa10.18□□□□□ -0.78
TARDBP-221ENST00000619555 CBLCQ9ULV8 474 aa10.18□□□□□ -0.78
TARDBP-221ENST00000619555 PLEKHA6Q9Y2H5 1048 aa10.18□□□□□ -0.78
TARDBP-221ENST00000619555 VPS13CQ709C8 3753 aa10.18□□□□□ -0.78
TARDBP-221ENST00000619555 GOLGA6L10A6NI86 522 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 CD8B2A6NJW9 211 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 SNPHO15079 494 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 ICOSLGO75144 302 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 UGT2B11O75310 529 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 GUCY1B2O75343 617 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 NME6O75414 186 aaPredicted RBP10.17□□□□□ -0.78
TARDBP-221ENST00000619555 CHRNGP07510 517 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 CD99P14209 185 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 CHN1P15882 459 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 NAGAP17050 411 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 CSNK2A2P19784 350 aaPredicted RBP10.17□□□□□ -0.78
TARDBP-221ENST00000619555 TACR1P25103 407 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 ARRB2P32121 409 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 PEX19P40855 299 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 ALDH9A1P49189 494 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 CEBPEQ15744 281 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 TRMT12Q53H54 448 aaKnown RBP10.17□□□□□ -0.78
TARDBP-221ENST00000619555 C10orf62Q5T681 223 aaPredicted RBP10.17□□□□□ -0.78
TARDBP-221ENST00000619555 SLC30A6Q6NXT4 461 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 ZCCHC23Q6ZST2 131 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 C1orf52Q8N6N3 182 aaKnown RBP10.17□□□□□ -0.78
TARDBP-221ENST00000619555 C9orf106Q8NAJ2 232 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 OR52R1Q8NGF1 315 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 OR1J4Q8NGS1 313 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 LINC01560Q8TB33 94 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 CTHRC1Q96CG8 243 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 KLHL29Q96CT2 875 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 HSPBAP1Q96EW2 488 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 CNRIP1Q96F85 164 aaPredicted RBP10.17□□□□□ -0.78
TARDBP-221ENST00000619555 LRRC46Q96FV0 321 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 RMND5BQ96G75 393 aaPredicted RBP10.17□□□□□ -0.78
TARDBP-221ENST00000619555 LCORQ96JN0 433 aaPredicted RBP10.17□□□□□ -0.78
TARDBP-221ENST00000619555 PKNOX2Q96KN3 472 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 ZNF681Q96N22 645 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 IQCGQ9H095 443 aaKnown RBP10.17□□□□□ -0.78
TARDBP-221ENST00000619555 GALNT9Q9HCQ5 603 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 MID1IP1Q9NPA3 183 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 SERHLQ9NQF3 203 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 HEY2Q9UBP5 337 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 MAPRE3Q9UPY8 281 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 CFL2Q9Y281 166 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 TIMM22Q9Y584 194 aa10.17□□□□□ -0.78
TARDBP-221ENST00000619555 MBD3L4A6NDZ8 208 aaPredicted RBP10.16□□□□□ -0.78
TARDBP-221ENST00000619555 MBD3L3A6NE82 208 aaPredicted RBP10.16□□□□□ -0.78
TARDBP-221ENST00000619555 MBD3L5A6NJ08 208 aaPredicted RBP10.16□□□□□ -0.78
TARDBP-221ENST00000619555 MANBAO00462 879 aa10.16□□□□□ -0.78
TARDBP-221ENST00000619555 TRIM13O60858 407 aa10.16□□□□□ -0.78
TARDBP-221ENST00000619555 ESRRBO95718 433 aa10.16□□□□□ -0.78
TARDBP-221ENST00000619555 ATP1B1P05026 303 aa10.16□□□□□ -0.78
TARDBP-221ENST00000619555 BPGMP07738 259 aa10.16□□□□□ -0.78
TARDBP-221ENST00000619555 DHRS4L1P0CG22 281 aa10.16□□□□□ -0.78
TARDBP-221ENST00000619555 PCSK2P16519 638 aa10.16□□□□□ -0.78
TARDBP-221ENST00000619555 DNASE1P24855 282 aa10.16□□□□□ -0.78
TARDBP-221ENST00000619555 CTSSP25774 331 aa10.16□□□□□ -0.78
TARDBP-221ENST00000619555 EMDP50402 254 aa10.16□□□□□ -0.78
TARDBP-221ENST00000619555 PKNOX1P55347 436 aa10.16□□□□□ -0.78
TARDBP-221ENST00000619555 MRPS35P82673 323 aaKnown RBP10.16□□□□□ -0.78
TARDBP-221ENST00000619555 PLCXD2Q0VAA5 305 aa10.16□□□□□ -0.78
TARDBP-221ENST00000619555 FOXF2Q12947 444 aa10.16□□□□□ -0.78
TARDBP-221ENST00000619555 DAZAP2Q15038 168 aaPredicted RBP10.16□□□□□ -0.78
TARDBP-221ENST00000619555 SF3B4Q15427 424 aaKnown RBP eCLIP10.16□□□□□ -0.784e-7■■□□□ 11.4
TARDBP-221ENST00000619555 SCIMPQ6UWF3 145 aa10.16□□□□□ -0.78
TARDBP-221ENST00000619555 PLXDC2Q6UX71 529 aa10.16□□□□□ -0.78
TARDBP-221ENST00000619555 TGIF2LYQ8IUE0 185 aa10.16□□□□□ -0.78
TARDBP-221ENST00000619555 WDSUB1Q8N9V3 476 aa10.16□□□□□ -0.78
TARDBP-221ENST00000619555 OR6Y1Q8NGX8 325 aa10.16□□□□□ -0.78
TARDBP-221ENST00000619555 GOT1L1Q8NHS2 421 aaPredicted RBP10.16□□□□□ -0.78
TARDBP-221ENST00000619555 MBD3L2Q8NHZ7 208 aaPredicted RBP10.16□□□□□ -0.78
TARDBP-221ENST00000619555 ARL8AQ96BM9 186 aa10.16□□□□□ -0.78
TARDBP-221ENST00000619555 TLCD1Q96CP7 247 aa10.16□□□□□ -0.78
TARDBP-221ENST00000619555 TUBA1CQ9BQE3 449 aa10.16□□□□□ -0.78
TARDBP-221ENST00000619555 OSBPL11Q9BXB4 747 aa10.16□□□□□ -0.78
TARDBP-221ENST00000619555 ANKRA2Q9H9E1 313 aa10.16□□□□□ -0.78
TARDBP-221ENST00000619555 CALHM2Q9HA72 323 aa10.16□□□□□ -0.78
TARDBP-221ENST00000619555 BRF2Q9HAW0 419 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms