RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 LSAMPQ13449 338 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 SMN1Q16637 294 aaKnown RBP11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 EXOC3L2Q2M3D2 409 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 FAM214AQ32MH5 1076 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 GPR107Q5VW38 600 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 MLIPQ5VWP3 458 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 CDC73Q6P1J9 531 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 DEF8Q6ZN54 512 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 TMPRSS9Q7Z410 1059 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 CCDC71Q8IV32 467 aaPredicted RBP11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 D2HGDHQ8N465 521 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 OR9Q2Q8NGE9 314 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 ADAMTS16Q8TE57 1224 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 RASSF5Q8WWW0 418 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 NAT6Q93015 286 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 EPYCQ99645 322 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 SMOC1Q9H4F8 434 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 PRTFDC1Q9NRG1 225 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 NTMQ9P121 344 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 C19orf53Q9UNZ5 99 aaPredicted RBP11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 PCDHGB3Q9Y5G1 929 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 U3KQA8 63 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 NCOR1O75376 2440 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 DUXAA6NLW8 204 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 TGFBR3LH3BV60 316 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 CLDN4O14493 209 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 SLC35E2P0CK97 266 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 ITGAMP11215 1152 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 POU2F1P14859 743 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 KCNJ5P48544 419 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 ESRRGP62508 458 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 KCNC4Q03721 635 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 CHRNEQ04844 493 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 DUSP5Q16690 384 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 CLPPQ16740 277 aaPredicted RBP11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 ZBED5Q49AG3 693 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 FHL5Q5TD97 284 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 MFSD4BQ5TF39 518 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 FAHD1Q6P587 224 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 ZNF773Q6PK81 442 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 RBM45Q8IUH3 476 aaKnown RBP11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 VWA5B2Q8N398 1253 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 SLC5A8Q8N695 610 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 RCBTB1Q8NDN9 531 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 HDAC2Q92769 488 aaKnown RBP11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 RBM18Q96H35 190 aaKnown RBP11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 LOXL4Q96JB6 756 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 SLC41A2Q96JW4 573 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 ZNF354BQ96LW1 612 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 FEVQ99581 238 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 PIP5K1AQ99755 562 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 CXorf21Q9HAI6 301 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 RASSF1Q9NS23 344 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 PTTG2Q9NZH5 202 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 GMPPBQ9Y5P6 360 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 ENPP4Q9Y6X5 453 aa11.86□□□□□ -0.51
TNFAIP3-209ENST00000619035 A0A0G2JPF8 293 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 HNRNPCL2B2RXH8 293 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 HNRNPCL3B7ZW38 293 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 H0YIG0 161 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 M0R3H8 397 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 SLC1A7O00341 560 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 ARHGAP33O14559 1287 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 PCDH17O14917 1159 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 FCMRO60667 390 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 SP9P0CG40 484 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 HNRNPCL4P0DMR1 293 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 ACP2P11117 423 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 PDX1P52945 283 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 CCL7P80098 99 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 RFX4Q33E94 735 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 CCNJQ5T5M9 372 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 YOD1Q5VVQ6 348 aaPredicted RBP11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 COMTD1Q86VU5 262 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 LSRQ86X29 649 aaPredicted RBP11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 GALNT12Q8IXK2 581 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 ZNF595Q8IYB9 648 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 C7orf57Q8NEG2 295 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 ISOC1Q96CN7 298 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 MVB12AQ96EY5 273 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 TRNT1Q96Q11 434 aaKnown RBP11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 NDC1Q9BTX1 674 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 SPATA5L1Q9BVQ7 753 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 ALOXE3Q9BYJ1 711 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 YTHDF1Q9BYJ9 559 aaKnown RBP11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 SLC38A1Q9H2H9 487 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 BCL2L10Q9HD36 194 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 FGF21Q9NSA1 209 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 GIN1Q9NXP7 522 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 MKLN1Q9UL63 735 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 LIPT1Q9Y234 373 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 A8MVJ9 347 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 H3BMH7 237 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 MAN1A2O60476 641 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 PLOD3O60568 738 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 CTNSO60931 367 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 DNAJB5O75953 348 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 ALPPP05187 535 aa11.85□□□□□ -0.51
TNFAIP3-209ENST00000619035 ZNF155Q12901 538 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms