RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 ADAM8P78325 824 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 KEAP1Q14145 624 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 RASA2Q15283 850 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 UNC50Q53HI1 259 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 CT45A2Q5DJT8 189 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 ZNF628Q5EBL2 1059 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 ADGRE4PQ86SQ3 457 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 OR9A2Q8NGT5 310 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 ZNF675Q8TD23 568 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 KAT2AQ92830 837 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 EXOSC8Q96B26 276 aaKnown RBP11.95□□□□□ -0.5
RPS28-204ENST00000602140 INTS12Q96CB8 462 aaKnown RBP11.95□□□□□ -0.5
RPS28-204ENST00000602140 ZFP3Q96NJ6 502 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 BTBD9Q96Q07 612 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 ADOQ96SZ5 270 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 YIPF4Q9BSR8 244 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 G6PC3Q9BUM1 346 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 SFXN3Q9BWM7 321 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 PLEKHF2Q9H8W4 249 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 GALNT8Q9NY28 637 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 MCM8Q9UJA3 840 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 FBXL2Q9UKC9 423 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 WIF1Q9Y5W5 379 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 MED12Q93074 2177 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 A0A087WUV0 522 aaPredicted RBP11.94□□□□□ -0.5
RPS28-204ENST00000602140 GNG14A0A1W2PPG7 69 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 PLOD2O00469 737 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 PCDH7O60245 1069 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 TSPAN2O60636 221 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 ULK1O75385 1050 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 BCAS2O75934 225 aaPredicted RBP11.94□□□□□ -0.5
RPS28-204ENST00000602140 ATE1O95260 518 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 TAC1P20366 129 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 TCEA1P23193 301 aaKnown RBP11.94□□□□□ -0.5
RPS28-204ENST00000602140 IL12BP29460 328 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 SRD5A2P31213 254 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 CPA2P48052 419 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 LHX2P50458 406 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 RAE1P78406 368 aaKnown RBP11.94□□□□□ -0.5
RPS28-204ENST00000602140 CSTF3Q12996 717 aaKnown RBP11.94□□□□□ -0.5
RPS28-204ENST00000602140 POU4F3Q15319 338 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 WHAMMP3Q1A5X7 153 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 ERCC6LQ2NKX8 1250 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 DEFB113Q30KQ7 82 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 ZNF678Q5SXM1 525 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 OR5M10Q6IEU7 315 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 AAGABQ6PD74 315 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 NPSR1Q6W5P4 371 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 GCNT2Q8N0V5 402 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 MMGT1Q8N4V1 131 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 NOA1Q8NC60 698 aaKnown RBP11.94□□□□□ -0.5
RPS28-204ENST00000602140 METTL6Q8TCB7 284 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 WNT2BQ93097 391 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 SLC35A4Q96G79 324 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 VSTM2LQ96N03 204 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 DOCK7Q96N67 2140 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 SFXN2Q96NB2 322 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 UCN2Q96RP3 112 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 ZNF382Q96SR6 550 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 ACPTQ9BZG2 426 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 GSX1Q9H4S2 264 aaPredicted RBP11.94□□□□□ -0.5
RPS28-204ENST00000602140 DLL4Q9NR61 685 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 TMEM216Q9P0N5 145 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 CLCF1Q9UBD9 225 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 ABCA4P78363 2273 aa11.94□□□□□ -0.5
RPS28-204ENST00000602140 EXOC1LA0A1B0GW35 172 aa11.93□□□□□ -0.5
RPS28-204ENST00000602140 SH3D21A4FU49 640 aa11.93□□□□□ -0.5
RPS28-204ENST00000602140 DLX3O60479 287 aa11.93□□□□□ -0.5
RPS28-204ENST00000602140 GOSR1O95249 250 aa11.93□□□□□ -0.5
RPS28-204ENST00000602140 GRK2P25098 689 aa11.93□□□□□ -0.5
RPS28-204ENST00000602140 ECHS1P30084 290 aa11.93□□□□□ -0.5
RPS28-204ENST00000602140 HMOX2P30519 316 aa11.93□□□□□ -0.5
RPS28-204ENST00000602140 KRT20P35900 424 aa11.93□□□□□ -0.5
RPS28-204ENST00000602140 HTR6P50406 440 aa11.93□□□□□ -0.5
RPS28-204ENST00000602140 EFR3AQ14156 821 aa11.93□□□□□ -0.5
RPS28-204ENST00000602140 HEPACAMQ14CZ8 416 aa11.93□□□□□ -0.5
RPS28-204ENST00000602140 SCIMPQ6UWF3 145 aa11.93□□□□□ -0.5
RPS28-204ENST00000602140 GPRIN3Q6ZVF9 776 aa11.93□□□□□ -0.5
RPS28-204ENST00000602140 LARP4Q71RC2 724 aaKnown RBP eCLIP11.93□□□□□ -0.55e-9■■□□□ 12.7
RPS28-204ENST00000602140 GRAMD2AQ8IUY3 354 aa11.93□□□□□ -0.5
RPS28-204ENST00000602140 SAMD14Q8IZD0 417 aaPredicted RBP11.93□□□□□ -0.5
RPS28-204ENST00000602140 C16orf78Q8WTQ4 265 aa11.93□□□□□ -0.5
RPS28-204ENST00000602140 ERP27Q96DN0 273 aa11.93□□□□□ -0.5
RPS28-204ENST00000602140 DTNBP1Q96EV8 351 aa11.93□□□□□ -0.5
RPS28-204ENST00000602140 APIPQ96GX9 242 aa11.93□□□□□ -0.5
RPS28-204ENST00000602140 C16orf45Q96MC5 204 aaPredicted RBP11.93□□□□□ -0.5
RPS28-204ENST00000602140 DACH2Q96NX9 599 aa11.93□□□□□ -0.5
RPS28-204ENST00000602140 TMEM237Q96Q45 408 aa11.93□□□□□ -0.5
RPS28-204ENST00000602140 ACBD3Q9H3P7 528 aa11.93□□□□□ -0.5
RPS28-204ENST00000602140 FOLH1BQ9HBA9 442 aa11.93□□□□□ -0.5
RPS28-204ENST00000602140 SLC35C2Q9NQQ7 365 aa11.93□□□□□ -0.5
RPS28-204ENST00000602140 GIMAP4Q9NUV9 329 aa11.93□□□□□ -0.5
RPS28-204ENST00000602140 DKKL1Q9UK85 242 aa11.93□□□□□ -0.5
RPS28-204ENST00000602140 RPH3AQ9Y2J0 694 aaPredicted RBP11.93□□□□□ -0.5
RPS28-204ENST00000602140 MRPS18CQ9Y3D5 142 aaKnown RBP11.93□□□□□ -0.5
RPS28-204ENST00000602140 MPDZO75970 2070 aa11.93□□□□□ -0.5
RPS28-204ENST00000602140 ACANP16112 2415 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 C17orf51A8MQB3 221 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 A8MXE2 369 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 B4DXG7 233 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms