RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 IPPKQ9H8X2 491 aa5.51□□□□□ -1.53
VRK3-220ENST00000600259 RNF122Q9H9V4 155 aa5.51□□□□□ -1.53
VRK3-220ENST00000600259 UBTD1Q9HAC8 227 aa5.51□□□□□ -1.53
VRK3-220ENST00000600259 ZBTB26Q9HCK0 441 aa5.51□□□□□ -1.53
VRK3-220ENST00000600259 ELOVL5Q9NYP7 299 aa5.51□□□□□ -1.53
VRK3-220ENST00000600259 ZNF226Q9NYT6 803 aa5.51□□□□□ -1.53
VRK3-220ENST00000600259 EHD3Q9NZN3 535 aa5.51□□□□□ -1.53
VRK3-220ENST00000600259 ADAM29Q9UKF5 820 aa5.51□□□□□ -1.53
VRK3-220ENST00000600259 PLLPQ9Y342 182 aa5.51□□□□□ -1.53
VRK3-220ENST00000600259 DSCAMO60469 2012 aa5.51□□□□□ -1.53
VRK3-220ENST00000600259 ABCA1O95477 2261 aa5.51□□□□□ -1.53
VRK3-220ENST00000600259 CUBNO60494 3623 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 CCDC189A1A4V9 331 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 EFCAB8A8MWE9 144 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 GOLGA6L6A8MZA4 724 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 C16orf97H3BN30 126 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 OVOL3O00110 214 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 PPP6CO00743 305 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 EIF3HO15372 352 aaKnown RBP eCLIP5.5□□□□□ -1.53
VRK3-220ENST00000600259 FADS1O60427 444 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 SMNDC1O75940 238 aaKnown RBP eCLIP5.5□□□□□ -1.53
VRK3-220ENST00000600259 CLDN9O95484 217 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 S100BP04271 92 aaPredicted RBP5.5□□□□□ -1.53
VRK3-220ENST00000600259 GSTA2P09210 222 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 PCSK2P16519 638 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 TCP1P17987 556 aaKnown RBP5.5□□□□□ -1.53
VRK3-220ENST00000600259 KRT15P19012 456 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 IL11P20809 199 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 TBXA2RP21731 343 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 GRK2P25098 689 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 DPP4P27487 766 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 CRABP2P29373 138 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 ALDH18A1P54886 795 aaKnown RBP5.5□□□□□ -1.53
VRK3-220ENST00000600259 CLDN20P56880 219 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 MRPS25P82663 173 aaKnown RBP5.5□□□□□ -1.53
VRK3-220ENST00000600259 PPP2R2BQ00005 443 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 IRF9Q00978 393 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 GALNT1Q10472 559 aaPredicted RBP5.5□□□□□ -1.53
VRK3-220ENST00000600259 TRAF3Q13114 568 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 LTB4RQ15722 352 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 TMEM44Q2T9K0 475 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 KBTBD12Q3ZCT8 623 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 FAM219BQ5XKK7 198 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 OR5M10Q6IEU7 315 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 OR2A2Q6IF42 318 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 HEPHL1Q6MZM0 1159 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 FAM180BQ6P0A1 224 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 METTL2BQ6P1Q9 378 aaKnown RBP5.5□□□□□ -1.53
VRK3-220ENST00000600259 AAGABQ6PD74 315 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 SCIMPQ6UWF3 145 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 NPSR1Q6W5P4 371 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 PLEKHM3Q6ZWE6 761 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 MYLK4Q86YV6 388 aaPredicted RBP5.5□□□□□ -1.53
VRK3-220ENST00000600259 PHC2Q8IXK0 858 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 LRRN4CLQ8ND94 238 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 OR2M3Q8NG83 312 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 OR52B6Q8NGF0 335 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 OR52R1Q8NGF1 315 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 LILRB1Q8NHL6 650 aaPredicted RBP5.5□□□□□ -1.53
VRK3-220ENST00000600259 CDKL2Q92772 493 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 REPS1Q96D71 796 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 VSTM2LQ96N03 204 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 SFXN2Q96NB2 322 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 COL21A1Q96P44 957 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 BTBD9Q96Q07 612 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 CDK15Q96Q40 435 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 ADOQ96SZ5 270 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 MED18Q9BUE0 208 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 NOL11Q9H8H0 719 aaKnown RBP5.5□□□□□ -1.53
VRK3-220ENST00000600259 ANKRA2Q9H9E1 313 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 SAYSD1Q9NPB0 183 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 PLSCR4Q9NRQ2 329 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 FARSBQ9NSD9 589 aaKnown RBP5.5□□□□□ -1.53
VRK3-220ENST00000600259 GRHL1Q9NZI5 618 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 KLRF1Q9NZS2 232 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 BCAP29Q9UHQ4 241 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 ZNF225Q9UK10 706 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 CFL2Q9Y281 166 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 ZNF337Q9Y3M9 751 aa5.5□□□□□ -1.53
VRK3-220ENST00000600259 A0A087X1B8 175 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.49□□□□□ -1.53
VRK3-220ENST00000600259 C1orf226A1L170 272 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 OR2M5A3KFT3 312 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 SLC22A20A6NK97 555 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 SYCE1LA8MT33 242 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 TMCC2O75069 709 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 REM1O75628 298 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 AQP8O94778 261 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 KLHL2O95198 593 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 PEPDP12955 493 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 NID1P14543 1247 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 POU2F1P14859 743 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 CSNK2A2P19784 350 aaPredicted RBP5.49□□□□□ -1.53
VRK3-220ENST00000600259 GCKP35557 465 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 CPOXP36551 454 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 PNLIPRP2P54317 469 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 NR1H2P55055 460 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 DSCR4P56555 118 aaPredicted RBP5.49□□□□□ -1.53
VRK3-220ENST00000600259 CORO7P57737 925 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 SIRPAP78324 504 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms