RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 ZNF155Q12901 538 aaPredicted RBP14.13□□□□□ -0.15
VRK3-207ENST00000594092 MED21Q13503 144 aa14.13□□□□□ -0.15
VRK3-207ENST00000594092 ELAVL1Q15717 326 aaKnown RBP14.13□□□□□ -0.15
VRK3-207ENST00000594092 GPAT3Q53EU6 434 aa14.13□□□□□ -0.15
VRK3-207ENST00000594092 DCAF12Q5T6F0 453 aa14.13□□□□□ -0.15
VRK3-207ENST00000594092 HES3Q5TGS1 186 aa14.13□□□□□ -0.15
VRK3-207ENST00000594092 PRAMEF8Q5VWM4 474 aa14.13□□□□□ -0.15
VRK3-207ENST00000594092 MLIPQ5VWP3 458 aa14.13□□□□□ -0.15
VRK3-207ENST00000594092 PRAMEF7Q5VXH5 474 aa14.13□□□□□ -0.15
VRK3-207ENST00000594092 C16orf62Q7Z3J2 963 aa14.13□□□□□ -0.15
VRK3-207ENST00000594092 BBS10Q8TAM1 723 aa14.13□□□□□ -0.15
VRK3-207ENST00000594092 FKBP10Q96AY3 582 aa14.13□□□□□ -0.15
VRK3-207ENST00000594092 TRNT1Q96Q11 434 aaKnown RBP14.13□□□□□ -0.15
VRK3-207ENST00000594092 DEPDC7Q96QD5 511 aa14.13□□□□□ -0.15
VRK3-207ENST00000594092 STACQ99469 402 aa14.13□□□□□ -0.15
VRK3-207ENST00000594092 SLC26A1Q9H2B4 701 aa14.13□□□□□ -0.15
VRK3-207ENST00000594092 SOX17Q9H6I2 414 aaPredicted RBP14.13□□□□□ -0.15
VRK3-207ENST00000594092 FOLH1BQ9HBA9 442 aa14.13□□□□□ -0.15
VRK3-207ENST00000594092 DUSP22Q9NRW4 184 aa14.13□□□□□ -0.15
VRK3-207ENST00000594092 EXD2Q9NVH0 621 aa14.13□□□□□ -0.15
VRK3-207ENST00000594092 PCDHGA8Q9Y5G5 932 aa14.13□□□□□ -0.15
VRK3-207ENST00000594092 HEMK1Q9Y5R4 338 aaPredicted RBP14.13□□□□□ -0.15
VRK3-207ENST00000594092 ZFHX2Q9C0A1 2572 aaPredicted RBP14.12□□□□□ -0.15
VRK3-207ENST00000594092 A8MVJ9 347 aa14.12□□□□□ -0.15
VRK3-207ENST00000594092 PROB1E7EW31 1015 aa14.12□□□□□ -0.15
VRK3-207ENST00000594092 PRAMEF2O60811 474 aa14.12□□□□□ -0.15
VRK3-207ENST00000594092 ALBP02768 609 aa14.12□□□□□ -0.15
VRK3-207ENST00000594092 CLPSP04118 112 aa14.12□□□□□ -0.15
VRK3-207ENST00000594092 HEXBP07686 556 aa14.12□□□□□ -0.15
VRK3-207ENST00000594092 KCNJ10P78508 379 aa14.12□□□□□ -0.15
VRK3-207ENST00000594092 SWT1Q5T5J6 900 aaKnown RBP14.12□□□□□ -0.15
VRK3-207ENST00000594092 MRPL14Q6P1L8 145 aaKnown RBP14.12□□□□□ -0.15
VRK3-207ENST00000594092 LANCL3Q6ZV70 420 aa14.12□□□□□ -0.15
VRK3-207ENST00000594092 ZDHHC13Q8IUH4 622 aa14.12□□□□□ -0.15
VRK3-207ENST00000594092 SVOPLQ8N434 492 aa14.12□□□□□ -0.15
VRK3-207ENST00000594092 ZNF615Q8N8J6 731 aa14.12□□□□□ -0.15
VRK3-207ENST00000594092 SMYD1Q8NB12 490 aa14.12□□□□□ -0.15
VRK3-207ENST00000594092 SENP5Q96HI0 755 aaPredicted RBP14.12□□□□□ -0.15
VRK3-207ENST00000594092 VSTM2LQ96N03 204 aa14.12□□□□□ -0.15
VRK3-207ENST00000594092 ZNF607Q96SK3 696 aa14.12□□□□□ -0.15
VRK3-207ENST00000594092 SPSB2Q99619 263 aa14.12□□□□□ -0.15
VRK3-207ENST00000594092 OR10A5Q9H207 317 aa14.12□□□□□ -0.15
VRK3-207ENST00000594092 SLC38A1Q9H2H9 487 aa14.12□□□□□ -0.15
VRK3-207ENST00000594092 CALML5Q9NZT1 146 aa14.12□□□□□ -0.15
VRK3-207ENST00000594092 PISDQ9UG56 409 aa14.12□□□□□ -0.15
VRK3-207ENST00000594092 GPC6Q9Y625 555 aaPredicted RBP14.12□□□□□ -0.15
VRK3-207ENST00000594092 ZNF292O60281 2723 aa14.12□□□□□ -0.15
VRK3-207ENST00000594092 RIF1Q5UIP0 2472 aaKnown RBP14.12□□□□□ -0.15
VRK3-207ENST00000594092 A0A0G2JPF8 293 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 A0A1W2PNU3 283 aaPredicted RBP14.11□□□□□ -0.15
VRK3-207ENST00000594092 HNRNPCL2B2RXH8 293 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 IDSB3KWA1 339 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 HNRNPCL3B7ZW38 293 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 hCG_2039718K7EN88 272 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 EI24O14681 340 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 DKK1O94907 266 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 NKX2-2O95096 273 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 MFN2O95140 757 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 KLK3P07288 261 aaPredicted RBP14.11□□□□□ -0.15
VRK3-207ENST00000594092 HNRNPCL4P0DMR1 293 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 CDK4P11802 303 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 ARHGAP11BQ3KRB8 267 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 IFI44LQ53G44 452 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 FAAH2Q6GMR7 532 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 FAM199XQ6PEV8 388 aaPredicted RBP14.11□□□□□ -0.15
VRK3-207ENST00000594092 PIWIL3Q7Z3Z3 882 aaKnown RBP14.11□□□□□ -0.15
VRK3-207ENST00000594092 CHDHQ8NE62 594 aaPredicted RBP14.11□□□□□ -0.15
VRK3-207ENST00000594092 OR7G1Q8NGA0 311 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 C16orf52Q8NHV5 167 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 SPPL2AQ8TCT8 520 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 FBXL20Q96IG2 436 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 COL21A1Q96P44 957 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 TAAR9Q96RI9 348 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 LMF2Q9BU23 707 aaKnown RBP14.11□□□□□ -0.15
VRK3-207ENST00000594092 BTBD2Q9BX70 525 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 OSBPL11Q9BXB4 747 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 RSPO3Q9BXY4 272 aaPredicted RBP14.11□□□□□ -0.15
VRK3-207ENST00000594092 ABCG2Q9UNQ0 655 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 DTX4Q9Y2E6 619 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 PADI2Q9Y2J8 665 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 AP4B1Q9Y6B7 739 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 CLCA3PQ9Y6N3 262 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 CCDC88CQ9P219 2028 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 CCDC187A0A096LP49 1063 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 TEX51A0A1B0GUA7 166 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 C7orf72A4D263 438 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 SYNDIG1LA6NDD5 238 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 G3V2T6 193 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 PLD2O14939 933 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 DENRO43583 198 aaKnown RBP14.11□□□□□ -0.15
VRK3-207ENST00000594092 DYRK3O43781 588 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 E2F6O75461 281 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 ZIC2O95409 532 aaPredicted RBP14.11□□□□□ -0.15
VRK3-207ENST00000594092 DDAH2O95865 285 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 JMJD7P0C870 316 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 ETS2P15036 469 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 CD247P20963 164 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 GABRA3P34903 492 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 LIMK1P53667 647 aa14.11□□□□□ -0.15
VRK3-207ENST00000594092 VLDLRP98155 873 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms