RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 NRG3P56975 720 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 GNGT1P63211 74 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 IGLV3-21P80748 117 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-226ENST00000591534 IRF9Q00978 393 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 CEBPEQ15744 281 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 FLYWCH1Q4VC44 716 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 C10orf62Q5T681 223 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-226ENST00000591534 DEPDC1Q5TB30 811 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 C6orf163Q5TEZ5 329 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 GKAP1Q5VSY0 366 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-226ENST00000591534 KHDRBS2Q5VWX1 349 aaKnown RBP8.66□□□□□ -1.02
BRCA1-226ENST00000591534 RTL6Q6ICC9 239 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 ADNP2Q6IQ32 1131 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 CDPF1Q6NVV7 123 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 ZYG11AQ6WRX3 759 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 LAS2Q8IYD9 372 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 LRRC25Q8N386 305 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-226ENST00000591534 ZNF321PQ8N8H1 164 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 ZNF473Q8WTR7 871 aaKnown RBP8.66□□□□□ -1.02
BRCA1-226ENST00000591534 WFDC12Q8WWY7 111 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 RIT1Q92963 219 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 EXT2Q93063 718 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 ANKRD9Q96BM1 317 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-226ENST00000591534 MBD6Q96DN6 1003 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 DTNBP1Q96EV8 351 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 ZNF597Q96LX8 424 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 FAM111AQ96PZ2 611 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 GAL3ST4Q96RP7 486 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 SECISBP2Q96T21 854 aaKnown RBP8.66□□□□□ -1.02
BRCA1-226ENST00000591534 TM9SF2Q99805 663 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 GPATCH1Q9BRR8 931 aaKnown RBP8.66□□□□□ -1.02
BRCA1-226ENST00000591534 CNPPD1Q9BV87 410 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 MS4A8Q9BY19 250 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 GSX1Q9H4S2 264 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-226ENST00000591534 ZNF703Q9H7S9 590 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-226ENST00000591534 SH2D2AQ9NP31 389 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 LYARQ9NX58 379 aaKnown RBP8.66□□□□□ -1.02
BRCA1-226ENST00000591534 NUDT4Q9NZJ9 180 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 OPTCQ9UBM4 332 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 ANGPTL3Q9Y5C1 460 aa8.66□□□□□ -1.02
BRCA1-226ENST00000591534 TUBAL3A6NHL2 446 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 GOLGA8RI6L899 631 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 K7EPI3 171 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 FGF17O60258 216 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 NPHS1O60500 1241 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 SPAG7O75391 227 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 TRAPPC6AO75865 159 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 GPR75O95800 540 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 TBX6O95947 436 aaPredicted RBP8.65□□□□□ -1.02
BRCA1-226ENST00000591534 FAM107AO95990 144 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 CHEK2O96017 543 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 BPGMP07738 259 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 VIMP08670 466 aaKnown RBP8.65□□□□□ -1.02
BRCA1-226ENST00000591534 RAB6AP20340 208 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 GDF1P27539 372 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 GALNSP34059 522 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 OPRM1P35372 400 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 MASP1P48740 699 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 GSK3AP49840 483 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 ALDH18A1P54886 795 aaKnown RBP8.65□□□□□ -1.02
BRCA1-226ENST00000591534 TNFRSF17Q02223 184 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 ID2Q02363 134 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 STX3Q13277 289 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 KEAP1Q14145 624 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 ZNF267Q14586 743 aaPredicted RBP8.65□□□□□ -1.02
BRCA1-226ENST00000591534 DAZAP2Q15038 168 aaPredicted RBP8.65□□□□□ -1.02
BRCA1-226ENST00000591534 FBXL19-AS1Q494R0 122 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 PRAMEF20Q5VT98 475 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 GRHL2Q6ISB3 625 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 CYP20A1Q6UW02 462 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 SCIMPQ6UWF3 145 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 ZNF793Q6ZN11 406 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 LIX1LQ8IVB5 337 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 OR4N5Q8IXE1 308 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 C9orf40Q8IXQ3 194 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 ZCCHC7Q8N3Z6 543 aaKnown RBP8.65□□□□□ -1.02
BRCA1-226ENST00000591534 GBP7Q8N8V2 638 aaPredicted RBP8.65□□□□□ -1.02
BRCA1-226ENST00000591534 OR7G3Q8NG95 312 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 STON2Q8WXE9 905 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 NRGNQ92686 78 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 DIO2Q92813 273 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 TP53INP1Q96A56 240 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 C7orf26Q96N11 449 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 WWTR1Q9GZV5 400 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 OXSMQ9NWU1 459 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 SPRR3Q9UBC9 169 aa8.65□□□□□ -1.02
BRCA1-226ENST00000591534 NIPBLQ6KC79 2804 aaeCLIP8.64□□□□□ -1.03
BRCA1-226ENST00000591534 C2orf92A0A1B0GVN3 265 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 TRPC5OSA6NMA1 111 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 FAM171A2A8MVW0 826 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 SUPT3HB4E1H0 165 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 SAP18O00422 153 aaKnown RBP8.64□□□□□ -1.03
BRCA1-226ENST00000591534 RTCAO00442 366 aaKnown RBP8.64□□□□□ -1.03
BRCA1-226ENST00000591534 NDUFAB1O14561 156 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 PROM1O43490 865 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 SUPT3HO75486 399 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 RAF1P04049 648 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 PROCP04070 461 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 RFPL3SP0C7P2 107 aa8.64□□□□□ -1.03
BRCA1-226ENST00000591534 SLC35E2P0CK97 266 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms