RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 CLN6Q9NWW5 311 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 GIN1Q9NXP7 522 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 ZNF226Q9NYT6 803 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 PTGFRNQ9P2B2 879 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 CPNE7Q9UBL6 633 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 SUSD2Q9UGT4 822 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 PILRAQ9UKJ1 303 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 CYP8B1Q9UNU6 501 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 KLHL20Q9Y2M5 609 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 LRP4O75096 1905 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 PCNX2A6NKB5 2137 aa9.34□□□□□ -0.91
VPS25-202ENST00000589219 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 SH3PXD2BA1X283 911 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 OR6C74A6NCV1 312 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 GLOD5A6NK44 160 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 P2RX6O15547 441 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 OR10H3O60404 316 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 BCAS1O75363 584 aaPredicted RBP9.33□□□□□ -0.92
VPS25-202ENST00000589219 CLPXO76031 633 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 IGHV4-34P06331 123 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 ZNF182P17025 639 aaPredicted RBP9.33□□□□□ -0.92
VPS25-202ENST00000589219 ALOX12P18054 663 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 POLR2CP19387 275 aaPredicted RBP9.33□□□□□ -0.92
VPS25-202ENST00000589219 GSTM3P21266 225 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 CHMP24386 653 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 PRKAR1BP31321 381 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 IFNA8P32881 189 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 IFNGR2P38484 337 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 FEN1P39748 380 aaKnown RBP9.33□□□□□ -0.92
VPS25-202ENST00000589219 MAP2K4P45985 399 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 SERPINB10P48595 397 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 GSSP48637 474 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 MAN2A2P49641 1150 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 BLKP51451 505 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 PRKAG1P54619 331 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 EMP3P54852 163 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 SNRPGP62308 76 aaKnown RBP9.33□□□□□ -0.92
VPS25-202ENST00000589219 OLR1P78380 273 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 COX10Q12887 443 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 ILKQ13418 452 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 NUMA1Q14980 2115 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 PTGES3Q15185 160 aaKnown RBP9.33□□□□□ -0.92
VPS25-202ENST00000589219 CTF1Q16619 201 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 SMN1Q16637 294 aaKnown RBP9.33□□□□□ -0.92
VPS25-202ENST00000589219 MOGQ16653 247 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 FAM214AQ32MH5 1076 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 C11orf91Q3C1V1 193 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 GPAT3Q53EU6 434 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 WDR45BQ5MNZ6 344 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 TMEM201Q5SNT2 666 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 C12orf73Q69YU5 71 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 FRMPD2BQ6IN97 320 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 PGBD2Q6P3X8 592 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 Q6ZPB1 254 aaPredicted RBP9.33□□□□□ -0.92
VPS25-202ENST00000589219 USP53Q70EK8 1073 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 C16orf62Q7Z3J2 963 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 CCDC103Q8IW40 242 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 CCDC116Q8IYX3 515 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 SLC22A18ASQ8N1D0 253 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 STX19Q8N4C7 294 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 KCT2Q8NC54 265 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 OR4K14Q8NGD5 310 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 BAHD1Q8TBE0 780 aaPredicted RBP9.33□□□□□ -0.92
VPS25-202ENST00000589219 ZCCHC10Q8TBK6 192 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 TRUB1Q8WWH5 349 aaKnown RBP9.33□□□□□ -0.92
VPS25-202ENST00000589219 KLHL6Q8WZ60 621 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 SLC38A4Q969I6 547 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 GIMAP5Q96F15 307 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 CRELD1Q96HD1 420 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 HSPA12BQ96MM6 686 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 Q96MT0 163 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 MACROD1Q9BQ69 325 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 FNDC11Q9BVV2 318 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 GTPBP2Q9BX10 602 aaKnown RBP9.33□□□□□ -0.92
VPS25-202ENST00000589219 RACGAP1Q9H0H5 632 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 C6orf106Q9H6K1 298 aaPredicted RBP9.33□□□□□ -0.92
VPS25-202ENST00000589219 SYNPO2LQ9H987 977 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 ANKHQ9HCJ1 492 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 TBC1D23Q9NUY8 699 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 KLHL28Q9NXS3 571 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 DAPP1Q9UN19 280 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 A4GNTQ9UNA3 340 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 SLC22A7Q9Y694 548 aa9.33□□□□□ -0.92
VPS25-202ENST00000589219 A0A0J9YVX5 310 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 SPTY2D1-AS1A0A0U1RR47 76 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 OR5K3A6NET4 321 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 M0R3H8 397 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 TLR4O00206 839 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 ARHGAP33O14559 1287 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 CTSVO60911 334 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 NME6O75414 186 aaPredicted RBP9.32□□□□□ -0.92
VPS25-202ENST00000589219 AK1P00568 194 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 GASTP01350 101 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 INHBBP09529 407 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 C8orf89P0DMQ9 161 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 XKP51811 444 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 FOXC1Q12948 553 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 BNIP3Q12983 259 aa9.32□□□□□ -0.92
VPS25-202ENST00000589219 EIF2B5Q13144 721 aaKnown RBP9.32□□□□□ -0.92
VPS25-202ENST00000589219 AQP6Q13520 282 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms