RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 GPN3Q9UHW5 284 aaPredicted RBP11.78□□□□□ -0.52
VMP1-202ENST00000585847 PTPRQQ9UMZ3 2332 aa11.78□□□□□ -0.52
VMP1-202ENST00000585847 SOCS6O14544 535 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 CASQ2O14958 399 aaPredicted RBP11.77□□□□□ -0.53
VMP1-202ENST00000585847 NKX2-8O15522 239 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 PEX1O43933 1283 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 FGF17O60258 216 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 DPM1O60762 260 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 PRAMEF2O60811 474 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 CREG1O75629 220 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 SERPINB7O75635 380 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 KRT36O76013 467 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 ANPEPP15144 967 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 ATP6V1B2P21281 511 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 KDELR2P33947 212 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 CDK9P50750 372 aaKnown RBP11.77□□□□□ -0.53
VMP1-202ENST00000585847 EMP2P54851 167 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 OR4D2P58180 307 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 RPS15P62841 145 aaKnown RBP11.77□□□□□ -0.53
VMP1-202ENST00000585847 MRPS22P82650 360 aaKnown RBP11.77□□□□□ -0.53
VMP1-202ENST00000585847 HPCAP84074 193 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 CDK6Q00534 326 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 CHRNB3Q05901 458 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 SLC13A2Q13183 592 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 SSPNQ14714 243 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 ZNHIT3Q15649 155 aaPredicted RBP11.77□□□□□ -0.53
VMP1-202ENST00000585847 ZSWIM7Q19AV6 140 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 CRB2Q5IJ48 1285 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.77□□□□□ -0.53
VMP1-202ENST00000585847 LANCL3Q6ZV70 420 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 PTOV1Q86YD1 416 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 CCDC116Q8IYX3 515 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 VWA5B2Q8N398 1253 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 BBS10Q8TAM1 723 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 FIG4Q92562 907 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 CTHRC1Q96CG8 243 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 DGAT2Q96PD7 388 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 CCNL2Q96S94 520 aaPredicted RBP11.77□□□□□ -0.53
VMP1-202ENST00000585847 ZNF607Q96SK3 696 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 GPATCH2Q9NW75 528 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 C3orf18Q9UK00 162 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 KCND3Q9UK17 655 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 MKL2Q9ULH7 1088 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 HS3ST3B1Q9Y662 390 aa11.77□□□□□ -0.53
VMP1-202ENST00000585847 LOC102723996A0A087X1L8 192 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 MYOCOSA0A1B0GUC4 107 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 TCRBV5S2A0A599 114 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 GLOD5A6NK44 160 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 H0YJX3 145 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 MASP2O00187 686 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 LDB3O75112 727 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 ALOX12BO75342 701 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 DEAF1O75398 565 aaPredicted RBP11.76□□□□□ -0.53
VMP1-202ENST00000585847 ETS2P15036 469 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 MAOAP21397 527 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 FASP25445 335 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 SOX18P35713 384 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 FEN1P39748 380 aaKnown RBP11.76□□□□□ -0.53
VMP1-202ENST00000585847 FOLR3P41439 243 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 CLCN2P51788 898 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 PCBP3P57721 371 aaKnown RBP11.76□□□□□ -0.53
VMP1-202ENST00000585847 DUSP2Q05923 314 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 SCARB2Q14108 478 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 ELAVL1Q15717 326 aaKnown RBP11.76□□□□□ -0.53
VMP1-202ENST00000585847 ADRM1Q16186 407 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 TBCELQ5QJ74 424 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 MFSD12Q6NUT3 480 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 CDC73Q6P1J9 531 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 KIRREL2Q6UWL6 708 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 EIF3MQ7L2H7 374 aaKnown RBP11.76□□□□□ -0.53
VMP1-202ENST00000585847 OR4N5Q8IXE1 308 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 ADGRG5Q8IZF4 528 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 FAM156AQ8NDB6 213 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 NUP43Q8NFH3 380 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 OR9A2Q8NGT5 310 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 OR14A16Q8NHC5 309 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 NR4A3Q92570 626 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 HOXB13Q92826 284 aaPredicted RBP11.76□□□□□ -0.53
VMP1-202ENST00000585847 KIAA1143Q96AT1 154 aaPredicted RBP11.76□□□□□ -0.53
VMP1-202ENST00000585847 TRNT1Q96Q11 434 aaKnown RBP11.76□□□□□ -0.53
VMP1-202ENST00000585847 WDR77Q9BQA1 342 aaPredicted RBP11.76□□□□□ -0.53
VMP1-202ENST00000585847 CRB3Q9BUF7 120 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 ADAP2Q9NPF8 381 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 C5AR2Q9P296 337 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 PRODH2Q9UF12 536 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 EGFL7Q9UHF1 273 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 CNOT11Q9UKZ1 510 aaKnown RBP11.76□□□□□ -0.53
VMP1-202ENST00000585847 BAG5Q9UL15 447 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 ERVK-11Q9UQG0 969 aa11.76□□□□□ -0.53
VMP1-202ENST00000585847 DOCK10Q96BY6 2186 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 A0A0G2JPF8 293 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 A0A1W2PQ72 361 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 TCRBV16S1A1N1A0A5B0 115 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 HNRNPCL2B2RXH8 293 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 HNRNPCL3B7ZW38 293 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 UPK1AO00322 258 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 SUV39H1O43463 412 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 HMGN2P05204 90 aaKnown RBP11.75□□□□□ -0.53
VMP1-202ENST00000585847 HNRNPCL4P0DMR1 293 aa11.75□□□□□ -0.53
VMP1-202ENST00000585847 ITGA2P17301 1181 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms