RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 TMPRSS9Q7Z410 1059 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 LRRC25Q8N386 305 aaPredicted RBP9.63□□□□□ -0.87
RFFL-212ENST00000584655 CHDHQ8NE62 594 aaPredicted RBP9.63□□□□□ -0.87
RFFL-212ENST00000584655 LINC00615Q96LM1 132 aaPredicted RBP9.63□□□□□ -0.87
RFFL-212ENST00000584655 MENTQ9BUN1 341 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 GORASP2Q9H8Y8 452 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 PCDHGB3Q9Y5G1 929 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 ALPK3Q96L96 1907 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 TRBV5-3A0A0A0MS03 114 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 FAM86C2PA6NEL3 165 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 FOXE1O00358 373 aaPredicted RBP9.63□□□□□ -0.87
RFFL-212ENST00000584655 AP3D1O14617 1153 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 BCAT2O15382 392 aaPredicted RBP9.63□□□□□ -0.87
RFFL-212ENST00000584655 DENRO43583 198 aaKnown RBP9.63□□□□□ -0.87
RFFL-212ENST00000584655 AP1G1O43747 822 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 H1F0P07305 194 aaKnown RBP9.63□□□□□ -0.87
RFFL-212ENST00000584655 ALOX5P09917 674 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 FPR1P21462 350 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 KRT20P35900 424 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 SOX3P41225 446 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 MVDP53602 400 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 CDK5R2Q13319 367 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 PODNL1Q6PEZ8 512 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 SERPINA11Q86U17 422 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 ABHD11Q8NFV4 315 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 OR52P1PQ8NH57 321 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 TMEM255BQ8WV15 326 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 SLC25A36Q96CQ1 311 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 ELP4Q96EB1 424 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 SLC35A4Q96G79 324 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 ADOQ96SZ5 270 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 EPHX3Q9H6B9 360 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 SIRT3Q9NTG7 399 aaPredicted RBP9.63□□□□□ -0.87
RFFL-212ENST00000584655 KLHL42Q9P2K6 505 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 TMEFF2Q9UIK5 374 aaPredicted RBP9.63□□□□□ -0.87
RFFL-212ENST00000584655 ZNF346Q9UL40 294 aaKnown RBP9.63□□□□□ -0.87
RFFL-212ENST00000584655 TMEM184BQ9Y519 407 aaPredicted RBP9.63□□□□□ -0.87
RFFL-212ENST00000584655 OBSL1O75147 1896 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 GBF1Q92538 1859 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 A8MVJ9 347 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 MAN2B1O00754 1011 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 LSAMPQ13449 338 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 PTGES3Q15185 160 aaKnown RBP9.62□□□□□ -0.87
RFFL-212ENST00000584655 NSDHLQ15738 373 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 PDZK1Q5T2W1 519 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 B3GNT8Q7Z7M8 397 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 CAMKVQ8NCB2 501 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 COQ8BQ96D53 544 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 DTNBP1Q96EV8 351 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 JSRP1Q96MG2 331 aaPredicted RBP9.62□□□□□ -0.87
RFFL-212ENST00000584655 MRPS26Q9BYN8 205 aaKnown RBP9.62□□□□□ -0.87
RFFL-212ENST00000584655 CLEC2DQ9UHP7 191 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 PLD2O14939 933 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 PLGP00747 810 aaPredicted RBP9.62□□□□□ -0.87
RFFL-212ENST00000584655 ALPPP05187 535 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 C11orf91Q3C1V1 193 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 COQ5Q5HYK3 327 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 ARHGAP40Q5TG30 622 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 BROXQ5VW32 411 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 GALNT18Q6P9A2 607 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 RTL10Q7L3V2 364 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 SYNPOQ8N3V7 929 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 DRAXINQ8NBI3 349 aaPredicted RBP9.62□□□□□ -0.87
RFFL-212ENST00000584655 SMPDL3BQ92485 455 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 SLC39A7Q92504 469 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 HTRA1Q92743 480 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 ZNF775Q96BV0 537 aaPredicted RBP9.62□□□□□ -0.87
RFFL-212ENST00000584655 OR2A5Q96R48 311 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 NKX3-1Q99801 234 aaPredicted RBP9.62□□□□□ -0.87
RFFL-212ENST00000584655 KCNS3Q9BQ31 491 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 ANKRD60Q9BZ19 345 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 SLC7A7Q9UM01 511 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 SH3D21A4FU49 640 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 FFAR1O14842 300 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 SEMA7AO75326 666 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 CLEC3AO75596 197 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 HLCSP50747 726 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 ST3GAL4Q11206 333 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 GINS1Q14691 196 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 FLYWCH1Q4VC44 716 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 TCTN3Q6NUS6 607 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 PHOSPHO1Q8TCT1 267 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 ELF4Q99607 663 aaPredicted RBP9.62□□□□□ -0.87
RFFL-212ENST00000584655 APOL4Q9BPW4 351 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 APMAPQ9HDC9 416 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 ASB4Q9Y574 426 aa9.62□□□□□ -0.87
RFFL-212ENST00000584655 BLOC1S5-TXNDC5H3BN57 136 aa9.61□□□□□ -0.87
RFFL-212ENST00000584655 KDM1AO60341 852 aa9.61□□□□□ -0.87
RFFL-212ENST00000584655 TNFRSF21O75509 655 aa9.61□□□□□ -0.87
RFFL-212ENST00000584655 IFNA14P01570 189 aa9.61□□□□□ -0.87
RFFL-212ENST00000584655 PABPC4LP0CB38 370 aaKnown RBP9.61□□□□□ -0.87
RFFL-212ENST00000584655 GNSP15586 552 aa9.61□□□□□ -0.87
RFFL-212ENST00000584655 AHCYP23526 432 aa9.61□□□□□ -0.87
RFFL-212ENST00000584655 RPL4P36578 427 aaKnown RBP9.61□□□□□ -0.87
RFFL-212ENST00000584655 HCCSP53701 268 aa9.61□□□□□ -0.87
RFFL-212ENST00000584655 CAV3P56539 151 aa9.61□□□□□ -0.87
RFFL-212ENST00000584655 FBXO43Q4G163 708 aa9.61□□□□□ -0.87
RFFL-212ENST00000584655 DMRTC1Q5HYR2 192 aa9.61□□□□□ -0.87
RFFL-212ENST00000584655 ERICH5Q6P6B1 374 aa9.61□□□□□ -0.87
RFFL-212ENST00000584655 LANCL3Q6ZV70 420 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms