RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 GCKP35557 465 aa9.99□□□□□ -0.81
NDEL1-208ENST00000580237 CASP3P42574 277 aa9.99□□□□□ -0.81
NDEL1-208ENST00000580237 SLC1A6P48664 564 aa9.99□□□□□ -0.81
NDEL1-208ENST00000580237 TRPC1P48995 793 aa9.99□□□□□ -0.81
NDEL1-208ENST00000580237 MANFP55145 182 aaKnown RBP9.99□□□□□ -0.81
NDEL1-208ENST00000580237 STX3Q13277 289 aa9.99□□□□□ -0.81
NDEL1-208ENST00000580237 EFR3AQ14156 821 aa9.99□□□□□ -0.81
NDEL1-208ENST00000580237 PTGR1Q14914 329 aa9.99□□□□□ -0.81
NDEL1-208ENST00000580237 HYAL4Q2M3T9 481 aa9.99□□□□□ -0.81
NDEL1-208ENST00000580237 UGT3A2Q3SY77 523 aa9.99□□□□□ -0.81
NDEL1-208ENST00000580237 WLSQ5T9L3 541 aa9.99□□□□□ -0.81
NDEL1-208ENST00000580237 HIST2H2BCQ6DN03 193 aa9.99□□□□□ -0.81
NDEL1-208ENST00000580237 ZNF585AQ6P3V2 769 aa9.99□□□□□ -0.81
NDEL1-208ENST00000580237 LARP4Q71RC2 724 aaKnown RBP eCLIP9.99□□□□□ -0.81
NDEL1-208ENST00000580237 TRILQ7L0X0 811 aa9.99□□□□□ -0.81
NDEL1-208ENST00000580237 ZNF551Q7Z340 670 aaPredicted RBP9.99□□□□□ -0.81
NDEL1-208ENST00000580237 NUP54Q7Z3B4 507 aa9.99□□□□□ -0.81
NDEL1-208ENST00000580237 FGD2Q7Z6J4 655 aa9.99□□□□□ -0.81
NDEL1-208ENST00000580237 DOLPP1Q86YN1 238 aa9.99□□□□□ -0.81
NDEL1-208ENST00000580237 ZNF781Q8N8C0 355 aa9.99□□□□□ -0.81
NDEL1-208ENST00000580237 OR5M9Q8NGP3 310 aa9.99□□□□□ -0.81
NDEL1-208ENST00000580237 ITLN2Q8WWU7 325 aaPredicted RBP9.99□□□□□ -0.81
NDEL1-208ENST00000580237 EFHD2Q96C19 240 aaPredicted RBP9.99□□□□□ -0.81
NDEL1-208ENST00000580237 MTERF3Q96E29 417 aa9.99□□□□□ -0.81
NDEL1-208ENST00000580237 DTNBP1Q96EV8 351 aa9.99□□□□□ -0.81
NDEL1-208ENST00000580237 ZNF764Q96H86 408 aaPredicted RBP9.99□□□□□ -0.81
NDEL1-208ENST00000580237 MS4A4EQ96PG1 132 aa9.99□□□□□ -0.81
NDEL1-208ENST00000580237 PHF12Q96QT6 1004 aa9.99□□□□□ -0.81
NDEL1-208ENST00000580237 ADOQ96SZ5 270 aa9.99□□□□□ -0.81
NDEL1-208ENST00000580237 VKORC1Q9BQB6 163 aa9.99□□□□□ -0.81
NDEL1-208ENST00000580237 ANGPTL4Q9BY76 406 aa9.99□□□□□ -0.81
NDEL1-208ENST00000580237 SLC6A15Q9H2J7 730 aa9.99□□□□□ -0.81
NDEL1-208ENST00000580237 C3orf14Q9HBI5 128 aa9.99□□□□□ -0.81
NDEL1-208ENST00000580237 PLSCR2Q9NRY7 297 aa9.99□□□□□ -0.81
NDEL1-208ENST00000580237 ATAD3AQ9NVI7 634 aa9.99□□□□□ -0.81
NDEL1-208ENST00000580237 QPCTLQ9NXS2 382 aa9.99□□□□□ -0.81
NDEL1-208ENST00000580237 COQ3Q9NZJ6 369 aa9.99□□□□□ -0.81
NDEL1-208ENST00000580237 MRTO4Q9UKD2 239 aaKnown RBP9.99□□□□□ -0.81
NDEL1-208ENST00000580237 C19orf53Q9UNZ5 99 aaPredicted RBP9.99□□□□□ -0.81
NDEL1-208ENST00000580237 EXO1Q9UQ84 846 aaKnown RBP9.99□□□□□ -0.81
NDEL1-208ENST00000580237 GPR55Q9Y2T6 319 aaPredicted RBP9.99□□□□□ -0.81
NDEL1-208ENST00000580237 C15orf41Q9Y2V0 281 aa9.99□□□□□ -0.81
NDEL1-208ENST00000580237 COL12A1Q99715 3063 aa9.99□□□□□ -0.81
NDEL1-208ENST00000580237 CACNA1DQ01668 2161 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 OR6C70A6NIJ9 312 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 UPK1AO00322 258 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 PLOD2O00469 737 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 SUSD5O60279 629 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 HCN1O60741 890 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 TRIM3O75382 744 aaPredicted RBP9.98□□□□□ -0.81
NDEL1-208ENST00000580237 IGHG3P01860 377 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 RFPL3SP0C7P2 107 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 DHRS4L1P0CG22 281 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 PRPS2P11908 318 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 EFNA1P20827 205 aaPredicted RBP9.98□□□□□ -0.81
NDEL1-208ENST00000580237 SOX18P35713 384 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 RPL14P50914 215 aaKnown RBP9.98□□□□□ -0.81
NDEL1-208ENST00000580237 PRKAG1P54619 331 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 PSMD4P55036 377 aaKnown RBP9.98□□□□□ -0.81
NDEL1-208ENST00000580237 MAGOHP61326 146 aaKnown RBP9.98□□□□□ -0.81
NDEL1-208ENST00000580237 PRR5P85299 388 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 PDE7AQ13946 482 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 CASP8Q14790 479 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 DECR1Q16698 335 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 PRSS53Q2L4Q9 553 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 SPDYE7PQ495Y7 208 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 VPS26BQ4G0F5 336 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 ZNF385BQ569K4 471 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 TNFAIP8L3Q5GJ75 292 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 C6orf136Q5SQH8 315 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 BEND6Q5SZJ8 279 aaPredicted RBP9.98□□□□□ -0.81
NDEL1-208ENST00000580237 IL23RQ5VWK5 629 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 SLC30A6Q6NXT4 461 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 XKRXQ6PP77 449 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 NPSR1Q6W5P4 371 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 NCCRP1Q6ZVX7 275 aaPredicted RBP9.98□□□□□ -0.81
NDEL1-208ENST00000580237 WDR53Q7Z5U6 358 aaPredicted RBP9.98□□□□□ -0.81
NDEL1-208ENST00000580237 CHERPQ8IWX8 916 aaKnown RBP9.98□□□□□ -0.81
NDEL1-208ENST00000580237 OR2L13Q8N349 312 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 GOLGA6L1Q8N7Z2 621 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 OR1J4Q8NGS1 313 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 OR6Y1Q8NGX8 325 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 FBXO30Q8TB52 745 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 PHF10Q8WUB8 498 aaKnown RBP9.98□□□□□ -0.81
NDEL1-208ENST00000580237 JADE3Q92613 823 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 HGDQ93099 445 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 ELP4Q96EB1 424 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 CHMP6Q96FZ7 201 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 TMEM41AQ96HV5 264 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 C3orf30Q96M34 536 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 NODALQ96S42 347 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 PRPF18Q99633 342 aaKnown RBP9.98□□□□□ -0.81
NDEL1-208ENST00000580237 GALNT9Q9HCQ5 603 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 PNPLA3Q9NST1 481 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 ARGLU1Q9NWB6 273 aaPredicted RBP9.98□□□□□ -0.81
NDEL1-208ENST00000580237 ALKBH4Q9NXW9 302 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 NOP53Q9NZM5 478 aaKnown RBP9.98□□□□□ -0.81
NDEL1-208ENST00000580237 TNFRSF10DQ9UBN6 386 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 MAPRE3Q9UPY8 281 aa9.98□□□□□ -0.81
NDEL1-208ENST00000580237 SNX8Q9Y5X2 465 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms