RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 NCCRP1Q6ZVX7 275 aaPredicted RBP17.1■□□□□ 0.33
PPP4R1-215ENST00000580182 RIMKLAQ8IXN7 391 aa17.1■□□□□ 0.33
PPP4R1-215ENST00000580182 ZFP28Q8NHY6 868 aa17.1■□□□□ 0.33
PPP4R1-215ENST00000580182 EFHD2Q96C19 240 aaPredicted RBP17.1■□□□□ 0.33
PPP4R1-215ENST00000580182 NTNG2Q96CW9 530 aa17.1■□□□□ 0.33
PPP4R1-215ENST00000580182 ADOQ96SZ5 270 aa17.1■□□□□ 0.33
PPP4R1-215ENST00000580182 SH3GL2Q99962 352 aa17.1■□□□□ 0.33
PPP4R1-215ENST00000580182 ZNF703Q9H7S9 590 aaPredicted RBP17.1■□□□□ 0.33
PPP4R1-215ENST00000580182 MEAF6Q9HAF1 191 aa17.1■□□□□ 0.33
PPP4R1-215ENST00000580182 GALNT9Q9HCQ5 603 aa17.1■□□□□ 0.33
PPP4R1-215ENST00000580182 EQTNQ9NQ60 294 aa17.1■□□□□ 0.33
PPP4R1-215ENST00000580182 ACSS1Q9NUB1 689 aaPredicted RBP17.1■□□□□ 0.33
PPP4R1-215ENST00000580182 ASIC5Q9NY37 505 aa17.1■□□□□ 0.33
PPP4R1-215ENST00000580182 NOP53Q9NZM5 478 aaKnown RBP17.1■□□□□ 0.33
PPP4R1-215ENST00000580182 TNFRSF10DQ9UBN6 386 aa17.1■□□□□ 0.33
PPP4R1-215ENST00000580182 HRH3Q9Y5N1 445 aa17.1■□□□□ 0.33
PPP4R1-215ENST00000580182 SDHDO14521 159 aa17.09■□□□□ 0.33
PPP4R1-215ENST00000580182 SASH3O75995 380 aa17.09■□□□□ 0.33
PPP4R1-215ENST00000580182 PTGS2P35354 604 aa17.09■□□□□ 0.33
PPP4R1-215ENST00000580182 PRKAG1P54619 331 aa17.09■□□□□ 0.33
PPP4R1-215ENST00000580182 RPP38P78345 283 aaKnown RBP17.09■□□□□ 0.33
PPP4R1-215ENST00000580182 OCRLQ01968 901 aa17.09■□□□□ 0.33
PPP4R1-215ENST00000580182 GAB1Q13480 694 aa17.09■□□□□ 0.33
PPP4R1-215ENST00000580182 SMU1Q2TAY7 513 aa17.09■□□□□ 0.33
PPP4R1-215ENST00000580182 CPTPQ5TA50 214 aa17.09■□□□□ 0.33
PPP4R1-215ENST00000580182 TMEM198Q66K66 360 aa17.09■□□□□ 0.33
PPP4R1-215ENST00000580182 DOLPP1Q86YN1 238 aa17.09■□□□□ 0.33
PPP4R1-215ENST00000580182 RAB3IL1Q8TBN0 382 aa17.09■□□□□ 0.33
PPP4R1-215ENST00000580182 COQ8BQ96D53 544 aa17.09■□□□□ 0.33
PPP4R1-215ENST00000580182 SLC35A4Q96G79 324 aa17.09■□□□□ 0.33
PPP4R1-215ENST00000580182 ZNF597Q96LX8 424 aa17.09■□□□□ 0.33
PPP4R1-215ENST00000580182 COL21A1Q96P44 957 aa17.09■□□□□ 0.33
PPP4R1-215ENST00000580182 METTL7AQ9H8H3 244 aa17.09■□□□□ 0.33
PPP4R1-215ENST00000580182 SIRT3Q9NTG7 399 aaPredicted RBP17.09■□□□□ 0.33
PPP4R1-215ENST00000580182 OR10H1Q9Y4A9 318 aa17.09■□□□□ 0.33
PPP4R1-215ENST00000580182 GTF3C1Q12789 2109 aa17.09■□□□□ 0.33
PPP4R1-215ENST00000580182 UTP20O75691 2785 aaKnown RBP17.09■□□□□ 0.33
PPP4R1-215ENST00000580182 HECTD1Q9ULT8 2610 aa17.08■□□□□ 0.33
PPP4R1-215ENST00000580182 ZNF407Q9C0G0 2248 aa17.08■□□□□ 0.33
PPP4R1-215ENST00000580182 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 A0A1W2PRB8 838 aa17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 OR6C70A6NIJ9 312 aa17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 GNB5O14775 395 aa17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 ICOSLGO75144 302 aa17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 SNX4O95219 450 aa17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 IGHG3P01860 377 aa17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 TPOP07202 933 aa17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 IFI6P09912 130 aa17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 LBPP18428 481 aa17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 PRPS1L1P21108 318 aa17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 RPL3P39023 403 aaKnown RBP17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 CASP6P55212 293 aa17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 CLDN8P56748 225 aa17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 SLC10A1Q14973 349 aa17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 ARHGAP11AQ6P4F7 1023 aa17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 LARP4Q71RC2 724 aaKnown RBP eCLIP17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 TRILQ7L0X0 811 aa17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 SZRD1Q7Z422 152 aa17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 CD163Q86VB7 1156 aa17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 WDR75Q8IWA0 830 aaKnown RBP17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 TRIM42Q8IWZ5 723 aa17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 KIRREL3Q8IZU9 778 aa17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 NUP43Q8NFH3 380 aa17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 FBXO30Q8TB52 745 aa17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 FAM57AQ8TBR7 257 aa17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 ZNF75CPQ92670 426 aaPredicted RBP17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 GIMAP5Q96F15 307 aa17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 CCDC120Q96HB5 630 aa17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 GNRHR2Q96P88 292 aa17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 PHF12Q96QT6 1004 aa17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 LMF2Q9BU23 707 aaKnown RBP17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 WDR55Q9H6Y2 383 aaPredicted RBP17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 VIPAS39Q9H9C1 493 aa17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 MYO7BQ6PIF6 2116 aa17.08■□□□□ 0.32
PPP4R1-215ENST00000580182 PTPN13Q12923 2485 aa17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 GOLGA8QA0A0J9YX86 632 aa17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 GXYLT2A0PJZ3 443 aa17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 GOLGA8OA6NCC3 632 aa17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 PRAMEF25A6NGN4 478 aa17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 NPIPA2E9PIF3 369 aa17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 GOLGA8NF8WBI6 632 aa17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 NPIPA3F8WFD2 350 aa17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 PRRG2O14669 202 aa17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 CLDN1O95832 211 aa17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 C6orf47O95873 294 aa17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 CYP4B1P13584 511 aa17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 IL12BP29460 328 aa17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 KRT20P35900 424 aa17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 MASP1P48740 699 aa17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 PER3P56645 1201 aa17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 MLC1Q15049 377 aa17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 PGS1Q32NB8 556 aa17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 HIST2H2BCQ6DN03 193 aa17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 TMEM81Q6P7N7 255 aa17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 PAOXQ6QHF9 649 aa17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 PACS2Q86VP3 889 aa17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 PIK3R3Q92569 461 aa17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 FAM120BQ96EK7 910 aaKnown RBP17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 OTUB1Q96FW1 271 aaPredicted RBP17.07■□□□□ 0.32
PPP4R1-215ENST00000580182 C16orf58Q96GQ5 468 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms