RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 PDP1Q9P0J1 537 aaPredicted RBP7.55□□□□□ -1.2
TOM1L1-220ENST00000575333 CITO14578 2027 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 MICAL3Q7RTP6 2002 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 A0A0A0MRY4 1105 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 LOC285095A0A1B0GVY8 99 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 LRIT2A6NDA9 550 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 OR2AT4A6NND4 320 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 PRR23D1E9PI22 279 aaPredicted RBP7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 RFXAPO00287 272 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 MBTPS2O43462 519 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 GALR3O60755 368 aaPredicted RBP7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 EFCAB14O75071 495 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 CRCPO75575 148 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 CDRT1O95170 752 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 SIX3O95343 332 aaPredicted RBP7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 SIX6O95475 246 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 C1RP00736 705 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 F10P00742 488 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 TFP02787 698 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 GALTP07902 379 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 ANXA5P08758 320 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 HOXB5P09067 269 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 CLTBP09497 229 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 THEGLP0DJG4 465 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 PRR23D2P0DMB1 279 aaPredicted RBP7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 ZNF25P17030 456 aaPredicted RBP7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 HOXA5P20719 270 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 TBXA2RP21731 343 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 THBS4P35443 961 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 SCNN1AP37088 669 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 CRYBB2P43320 205 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 CDX1P47902 265 aaPredicted RBP7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 PPT1P50897 306 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 ANXA11P50995 505 aaKnown RBP7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 MRPS11P82912 194 aaKnown RBP7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 ACSM1Q08AH1 577 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 TWF1Q12792 350 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 CNTN1Q12860 1018 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 C1DQ13901 141 aaKnown RBP7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 MED22Q15528 200 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 KCNMB1Q16558 191 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 NTRK2Q16620 822 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 HAGHQ16775 308 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 NDUFAF6Q330K2 333 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 FAHD1Q6P587 224 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 SSX6Q7RTT6 188 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 DCXRQ7Z4W1 244 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 GPR149Q86SP6 731 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 OAFQ86UD1 273 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 ZNF283Q8N7M2 679 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 FBXO15Q8NCQ5 510 aaPredicted RBP7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 OR2T12Q8NG77 320 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 OR2L3Q8NG85 312 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 OR4K15Q8NH41 348 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 CLP1Q92989 425 aaKnown RBP7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 FAM162AQ96A26 154 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 KCTD7Q96MP8 289 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 MAPKAP1Q9BPZ7 522 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 IFT27Q9BW83 186 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 HDHD2Q9H0R4 259 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 OSBPL2Q9H1P3 480 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 ABCG5Q9H222 651 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 ST6GALNAC4Q9H4F1 302 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 AKTIPQ9H8T0 292 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 KCNK12Q9HB15 430 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 BARX1Q9HBU1 254 aaPredicted RBP7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 HHATLQ9HCP6 504 aa7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 SARS2Q9NP81 518 aaKnown RBP7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 DCAF13Q9NV06 445 aaKnown RBP7.54□□□□□ -1.2
TOM1L1-220ENST00000575333 SYNDIG1LA6NDD5 238 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 MATN3O15232 486 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 RRP8O43159 456 aaKnown RBP7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 OR2T1O43869 369 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 AKR7A3O95154 331 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 C1GALT1C1LP0DN25 315 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 PRKACGP22612 351 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 PTPN3P26045 913 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 YWHAQP27348 245 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 PRDX5P30044 214 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 HOXA9P31269 272 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 WNT5AP41221 380 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 SMSP52788 366 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 EIF5AP63241 154 aaKnown RBP7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 BLOC1S1P78537 153 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 MEF2AQ02078 507 aaPredicted RBP7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 MLLT11Q13015 90 aaPredicted RBP7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 SKP2Q13309 424 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 CAMK2GQ13555 558 aaPredicted RBP7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 FNDC3BQ53EP0 1204 aaKnown RBP7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 TSTD2Q5T7W7 516 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 MEDAGQ5VYS4 303 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 ZNF660Q6AZW8 331 aaPredicted RBP7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 OR2T5Q6IEZ7 315 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 MED27Q6P2C8 311 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 ENPP6Q6UWR7 440 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 DET1Q7L5Y6 550 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 P4HA3Q7Z4N8 544 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 TMEM179BQ7Z7N9 219 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 FAM126BQ8IXS8 530 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 PRSS58Q8IYP2 241 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms