RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 S1PR1P21453 382 aa27.15■■□□□ 1.94
CTDNEP1-208ENST00000573600 PRKAR1BP31321 381 aa27.15■■□□□ 1.94
CTDNEP1-208ENST00000573600 DUSP3P51452 185 aaPredicted RBP27.15■■□□□ 1.94
CTDNEP1-208ENST00000573600 SMIM11AP58511 58 aa27.15■■□□□ 1.94
CTDNEP1-208ENST00000573600 GANABQ14697 944 aaKnown RBP27.15■■□□□ 1.94
CTDNEP1-208ENST00000573600 DHRS4L2Q6PKH6 230 aa27.15■■□□□ 1.94
CTDNEP1-208ENST00000573600 DEF8Q6ZN54 512 aa27.15■■□□□ 1.94
CTDNEP1-208ENST00000573600 COX18Q8N8Q8 333 aa27.15■■□□□ 1.94
CTDNEP1-208ENST00000573600 OR52J3Q8NH60 311 aa27.15■■□□□ 1.94
CTDNEP1-208ENST00000573600 YTHDF1Q9BYJ9 559 aaKnown RBP27.15■■□□□ 1.94
CTDNEP1-208ENST00000573600 ACAD8Q9UKU7 415 aa27.15■■□□□ 1.94
CTDNEP1-208ENST00000573600 DPPA5A6NC42 116 aa27.14■■□□□ 1.94
CTDNEP1-208ENST00000573600 MITFO75030 526 aaPredicted RBP27.14■■□□□ 1.94
CTDNEP1-208ENST00000573600 SMIM18P0DKX4 95 aa27.14■■□□□ 1.94
CTDNEP1-208ENST00000573600 CKMT1AP12532 417 aa27.14■■□□□ 1.94
CTDNEP1-208ENST00000573600 PIGAP37287 484 aa27.14■■□□□ 1.94
CTDNEP1-208ENST00000573600 TPD52P55327 224 aaPredicted RBP27.14■■□□□ 1.94
CTDNEP1-208ENST00000573600 IL1RL1Q01638 556 aa27.14■■□□□ 1.94
CTDNEP1-208ENST00000573600 DSG2Q14126 1118 aa27.14■■□□□ 1.94
CTDNEP1-208ENST00000573600 CLPPQ16740 277 aaPredicted RBP27.14■■□□□ 1.94
CTDNEP1-208ENST00000573600 TYW3Q6IPR3 259 aaKnown RBP27.14■■□□□ 1.94
CTDNEP1-208ENST00000573600 TMPRSS9Q7Z410 1059 aa27.14■■□□□ 1.94
CTDNEP1-208ENST00000573600 THAP5Q7Z6K1 395 aa27.14■■□□□ 1.94
CTDNEP1-208ENST00000573600 GALNT5Q7Z7M9 940 aa27.14■■□□□ 1.94
CTDNEP1-208ENST00000573600 TAGAPQ8N103 731 aa27.14■■□□□ 1.94
CTDNEP1-208ENST00000573600 ZNF786Q8N393 782 aa27.14■■□□□ 1.94
CTDNEP1-208ENST00000573600 OR4D11Q8NGI4 311 aa27.14■■□□□ 1.94
CTDNEP1-208ENST00000573600 OR2I1PQ8NGU4 316 aa27.14■■□□□ 1.94
CTDNEP1-208ENST00000573600 OR52P1PQ8NH57 321 aa27.14■■□□□ 1.94
CTDNEP1-208ENST00000573600 PMM1Q92871 262 aa27.14■■□□□ 1.94
CTDNEP1-208ENST00000573600 DHRS1Q96LJ7 313 aa27.14■■□□□ 1.94
CTDNEP1-208ENST00000573600 YIPF2Q9BWQ6 316 aa27.14■■□□□ 1.94
CTDNEP1-208ENST00000573600 DHCR7Q9UBM7 475 aaKnown RBP27.14■■□□□ 1.94
CTDNEP1-208ENST00000573600 ARRDC5A6NEK1 342 aa27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 FCMRO60667 390 aa27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 SEC24DO94855 1032 aaPredicted RBP27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 NKX2-2O95096 273 aa27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 SLC34A2O95436 690 aa27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 MAOAP21397 527 aa27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 OR1D4P47884 311 aa27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 ZNF155Q12901 538 aaPredicted RBP27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 KCTD21Q4G0X4 260 aa27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 DCST2Q5T1A1 773 aa27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 ISLR2Q6UXK2 745 aa27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 PEX5LQ8IYB4 626 aa27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 GPR151Q8TDV0 419 aa27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 FKBP10Q96AY3 582 aa27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 LMF2Q9BU23 707 aaKnown RBP27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 ZNF350Q9GZX5 532 aa27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 QRSL1Q9H0R6 528 aaKnown RBP27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 ZNF304Q9HCX3 659 aa27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 LANCL2Q9NS86 450 aa27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 KLHL28Q9NXS3 571 aa27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 SRPK3Q9UPE1 567 aa27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 NINQ8N4C6 2090 aa27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 USP34Q70CQ2 3546 aa27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 A0A1B0GX78 115 aa27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 FFAR1O14842 300 aa27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 STX11O75558 287 aa27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 CCNB2O95067 398 aa27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 EPPINO95925 133 aa27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 FBLP22087 321 aaKnown RBP27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 DAB2P98082 770 aa27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 ZNHIT3Q15649 155 aaPredicted RBP27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 LACC1Q8IV20 430 aa27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 ALPK1Q96QP1 1244 aa27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 FEVQ99581 238 aa27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 RIBC2Q9H4K1 309 aa27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 MKLN1Q9UL63 735 aa27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 ZNF232Q9UNY5 417 aa27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 HCN4Q9Y3Q4 1203 aa27.13■■□□□ 1.93
CTDNEP1-208ENST00000573600 ZDBF2Q9HCK1 2354 aa27.12■■□□□ 1.93
CTDNEP1-208ENST00000573600 ZIC2O95409 532 aaPredicted RBP27.12■■□□□ 1.93
CTDNEP1-208ENST00000573600 POU6F2P78424 691 aaPredicted RBP27.12■■□□□ 1.93
CTDNEP1-208ENST00000573600 KEAP1Q14145 624 aa27.12■■□□□ 1.93
CTDNEP1-208ENST00000573600 ANGPT1Q15389 498 aa27.12■■□□□ 1.93
CTDNEP1-208ENST00000573600 PROX2Q3B8N5 592 aa27.12■■□□□ 1.93
CTDNEP1-208ENST00000573600 RBM45Q8IUH3 476 aaKnown RBP27.12■■□□□ 1.93
CTDNEP1-208ENST00000573600 IFI44Q8TCB0 444 aa27.12■■□□□ 1.93
CTDNEP1-208ENST00000573600 NR4A3Q92570 626 aa27.12■■□□□ 1.93
CTDNEP1-208ENST00000573600 ARHGDIGQ99819 225 aa27.12■■□□□ 1.93
CTDNEP1-208ENST00000573600 GTPBP2Q9BX10 602 aaKnown RBP27.12■■□□□ 1.93
CTDNEP1-208ENST00000573600 GRIP2Q9C0E4 1043 aa27.12■■□□□ 1.93
CTDNEP1-208ENST00000573600 SAP130Q9H0E3 1048 aa27.12■■□□□ 1.93
CTDNEP1-208ENST00000573600 ING2Q9H160 280 aa27.12■■□□□ 1.93
CTDNEP1-208ENST00000573600 NMNAT1Q9HAN9 279 aaPredicted RBP27.12■■□□□ 1.93
CTDNEP1-208ENST00000573600 NECTIN3Q9NQS3 549 aa27.12■■□□□ 1.93
CTDNEP1-208ENST00000573600 POLE3Q9NRF9 147 aa27.12■■□□□ 1.93
CTDNEP1-208ENST00000573600 TMCC3Q9ULS5 477 aa27.12■■□□□ 1.93
CTDNEP1-208ENST00000573600 M0R3H8 397 aa27.11■■□□□ 1.93
CTDNEP1-208ENST00000573600 PCDH17O14917 1159 aa27.11■■□□□ 1.93
CTDNEP1-208ENST00000573600 PRAMEF2O60811 474 aa27.11■■□□□ 1.93
CTDNEP1-208ENST00000573600 H1F0P07305 194 aaKnown RBP27.11■■□□□ 1.93
CTDNEP1-208ENST00000573600 DUSP8Q13202 625 aa27.11■■□□□ 1.93
CTDNEP1-208ENST00000573600 LARS2Q15031 903 aaKnown RBP27.11■■□□□ 1.93
CTDNEP1-208ENST00000573600 QSOX2Q6ZRP7 698 aa27.11■■□□□ 1.93
CTDNEP1-208ENST00000573600 BMP8AQ7Z5Y6 402 aa27.11■■□□□ 1.93
CTDNEP1-208ENST00000573600 COMTD1Q86VU5 262 aa27.11■■□□□ 1.93
CTDNEP1-208ENST00000573600 VRK2Q86Y07 508 aa27.11■■□□□ 1.93
CTDNEP1-208ENST00000573600 ZNF619Q8N2I2 560 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms