RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 FGL1Q08830 312 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 TCF15Q12870 199 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 ARL6IP1Q15041 203 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 CHI3L2Q15782 390 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 ADRM1Q16186 407 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 SGCBQ16585 318 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 C14orf28Q4W4Y0 310 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 OR5M10Q6IEU7 315 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 FAM180AQ6UWF9 173 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 RTN4RL2Q86UN3 420 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 ARHGAP12Q8IWW6 846 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 COMMD1Q8N668 190 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 CSNK2A3Q8NEV1 391 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 OR4C6Q8NH72 309 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 RGMAQ96B86 450 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 DIRC2Q96SL1 478 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 RBBP8Q99708 897 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 DPH2Q9BQC3 489 aaPredicted RBP6.28□□□□□ -1.4
SMG1-217ENST00000569764 SLC17A7Q9P2U7 560 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 ONECUT1Q9UBC0 465 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 PILRBQ9UKJ0 227 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 EIF3LQ9Y262 564 aaKnown RBP6.28□□□□□ -1.4
SMG1-217ENST00000569764 PTGDR2Q9Y5Y4 395 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 MICAL3Q7RTP6 2002 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 YJEFN3A6XGL0 299 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 LMO7DNF2Z398 122 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 hCG_2039718K7EN88 272 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 INSIG1O15503 277 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 HS6ST1O60243 411 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 ERN1O75460 977 aaKnown RBP6.27□□□□□ -1.41
SMG1-217ENST00000569764 KRT36O76013 467 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 CSF2P04141 144 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 AREGP15514 252 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 CCNOP22674 350 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 RPA3P35244 121 aaPredicted RBP6.27□□□□□ -1.41
SMG1-217ENST00000569764 GRIA1P42261 906 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 CXCR3P49682 368 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 CACNG1Q06432 222 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.27□□□□□ -1.41
SMG1-217ENST00000569764 OLIG2Q13516 323 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 CAMK1Q14012 370 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 ABHD17BQ5VST6 288 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 HACD4Q5VWC8 232 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 CARD17Q5XLA6 110 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 LRRC74BQ6ZQY2 392 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 TMEM26Q6ZUK4 368 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 BBS12Q6ZW61 710 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 GLT6D1Q7Z4J2 308 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 LIX1Q8N485 282 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 UTP4Q969X6 686 aaKnown RBP6.27□□□□□ -1.41
SMG1-217ENST00000569764 REPS1Q96D71 796 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 RPL10LQ96L21 214 aaKnown RBP6.27□□□□□ -1.41
SMG1-217ENST00000569764 KCTD15Q96SI1 283 aaPredicted RBP6.27□□□□□ -1.41
SMG1-217ENST00000569764 PKMYT1Q99640 499 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 EGFL8Q99944 293 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 WRAP53Q9BUR4 548 aaKnown RBP6.27□□□□□ -1.41
SMG1-217ENST00000569764 APOOQ9BUR5 198 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.27□□□□□ -1.41
SMG1-217ENST00000569764 TMEM168Q9H0V1 697 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 POFUT1Q9H488 388 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 CNOT10Q9H9A5 744 aaKnown RBP6.27□□□□□ -1.41
SMG1-217ENST00000569764 PPANQ9NQ55 473 aaKnown RBP6.27□□□□□ -1.41
SMG1-217ENST00000569764 PRDM8Q9NQV8 689 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 PLEKHM1Q9Y4G2 1056 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 H0Y8X5 98 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 MSI1O43347 362 aaKnown RBP6.27□□□□□ -1.41
SMG1-217ENST00000569764 UGDHO60701 494 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 RPP14O95059 124 aaKnown RBP6.27□□□□□ -1.41
SMG1-217ENST00000569764 JCHAINP01591 159 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 GBAP04062 536 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 EIF2S3P41091 472 aaKnown RBP6.27□□□□□ -1.41
SMG1-217ENST00000569764 AP3S2P59780 193 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 PRPS1P60891 318 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 PSMA6P60900 246 aaKnown RBP6.27□□□□□ -1.41
SMG1-217ENST00000569764 DEFA6Q01524 100 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 KPNB1Q14974 876 aaKnown RBP6.27□□□□□ -1.41
SMG1-217ENST00000569764 EXT1Q16394 746 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 ANKRD26P1Q6NSI1 321 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 CDPF1Q6NVV7 123 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 CHST14Q8NCH0 376 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 OR56B1Q8NGI3 324 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 GLMPQ8WWB7 406 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 HAS2Q92819 552 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 CLPTM1LQ96KA5 538 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 LRRN3Q9H3W5 708 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 MLXIPLQ9NP71 852 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 ATP13A2Q9NQ11 1180 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 PIGVQ9NUD9 493 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 LRIT1Q9P2V4 623 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 MRTO4Q9UKD2 239 aaKnown RBP6.27□□□□□ -1.41
SMG1-217ENST00000569764 NYNRINQ9P2P1 1898 aaKnown RBP6.27□□□□□ -1.41
SMG1-217ENST00000569764 MYO16Q9Y6X6 1858 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 GRID2O43424 1007 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 SGCEO43556 437 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 TBX19O60806 448 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 TTC4O95801 387 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 RPLP0P05388 317 aaKnown RBP6.27□□□□□ -1.41
SMG1-217ENST00000569764 CRYGCP07315 174 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 ITIH2P19823 946 aa6.27□□□□□ -1.41
SMG1-217ENST00000569764 OGNP20774 298 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms