RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 SLC5A11Q8WWX8 675 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 SLC25A46Q96AG3 418 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 EXOSC8Q96B26 276 aaKnown RBP6.77□□□□□ -1.33
CNOT1-216ENST00000569240 BMFQ96LC9 184 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 EDEM2Q9BV94 578 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 ALOXE3Q9BYJ1 711 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 BRF2Q9HAW0 419 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 ACSS1Q9NUB1 689 aaPredicted RBP6.77□□□□□ -1.33
CNOT1-216ENST00000569240 GPR45Q9Y5Y3 372 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 ARRDC5A6NEK1 342 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 SYN1P17600 705 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 TACR2P21452 398 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 BDNFP23560 247 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 GIFP27352 417 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 FAM151BQ6UXP7 276 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 SSX7Q7RTT5 188 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 NETO1Q8TDF5 533 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 APH1BQ8WW43 257 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 PNPLA2Q96AD5 504 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 PRAP1Q96NZ9 151 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 TMEM43Q9BTV4 400 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 TMPRSS4Q9NRS4 437 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 ZNF275Q9NSD4 429 aaPredicted RBP6.77□□□□□ -1.33
CNOT1-216ENST00000569240 CHRNA9Q9UGM1 479 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 LAMP5Q9UJQ1 280 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 PCDHB10Q9UN67 800 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 COPS3Q9UNS2 423 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 DHDHQ9UQ10 334 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 TRBV2A0A0J9YWF9 115 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 OR6C74A6NCV1 312 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 CPSF4LA6NMK7 179 aaKnown RBP6.77□□□□□ -1.33
CNOT1-216ENST00000569240 CTDSP2O14595 271 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 DPM1O60762 260 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 RAD51DO75771 328 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 DIRAS1O95057 198 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 CR2P20023 1033 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 KCNJ5P48544 419 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 THBS3P49746 956 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 HTR4Q13639 388 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 ADPRMQ3LIE5 342 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 LILRA2Q8N149 483 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 FAM71CQ8NEG0 241 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 BCL7CQ8WUZ0 217 aaPredicted RBP6.77□□□□□ -1.33
CNOT1-216ENST00000569240 ARNTL2Q8WYA1 636 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 COQ8BQ96D53 544 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 PRR11Q96HE9 360 aaPredicted RBP6.77□□□□□ -1.33
CNOT1-216ENST00000569240 C5orf34Q96MH7 638 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 NPY6RQ99463 290 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 VPS25Q9BRG1 176 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 PCED1AQ9H1Q7 454 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 ACOXLQ9NUZ1 547 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 PCDHA9Q9Y5H5 950 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 TMEM218A2RU14 115 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 RNASET2O00584 256 aaKnown RBP6.77□□□□□ -1.33
CNOT1-216ENST00000569240 CPN1P15169 458 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 TBPP20226 339 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 ALAS2P22557 587 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 HNF1BP35680 557 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 ZNF155Q12901 538 aaPredicted RBP6.77□□□□□ -1.33
CNOT1-216ENST00000569240 ILKQ13418 452 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 SNTB1Q13884 538 aaKnown RBP6.77□□□□□ -1.33
CNOT1-216ENST00000569240 SLC17A1Q14916 467 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 PTPRRQ15256 657 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 PCGF3Q3KNV8 242 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 ACOT7LQ6ZUV0 252 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 SPATC1Q76KD6 591 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 TMPRSS12Q86WS5 348 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 GLIS1Q8NBF1 620 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 SIDT2Q8NBJ9 832 aaKnown RBP6.77□□□□□ -1.33
CNOT1-216ENST00000569240 OR5D16Q8NGK9 328 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 GPR148Q8TDV2 347 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 PGAP3Q96FM1 320 aaPredicted RBP6.77□□□□□ -1.33
CNOT1-216ENST00000569240 ZNF668Q96K58 619 aaPredicted RBP6.77□□□□□ -1.33
CNOT1-216ENST00000569240 SOX17Q9H6I2 414 aaPredicted RBP6.77□□□□□ -1.33
CNOT1-216ENST00000569240 BCO1Q9HAY6 547 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 VNN3Q9NY84 501 aa6.77□□□□□ -1.33
CNOT1-216ENST00000569240 GPR89AB7ZAQ6 455 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 ZNF623O75123 536 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 SIX3O95343 332 aaPredicted RBP6.76□□□□□ -1.33
CNOT1-216ENST00000569240 BCHEP06276 602 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 GPR89BP0CG08 455 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 PYCR1P32322 319 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 MPPED2Q15777 294 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 MOB1BQ7L9L4 216 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 AKR7LQ8NHP1 331 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 MCHR1Q99705 422 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 SAMD10Q9BYL1 202 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 FZD8Q9H461 694 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 LDAHQ9H6V9 325 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 PHPT1Q9NRX4 125 aaPredicted RBP6.76□□□□□ -1.33
CNOT1-216ENST00000569240 MAFBQ9Y5Q3 323 aaPredicted RBP6.76□□□□□ -1.33
CNOT1-216ENST00000569240 B4DXG7 233 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 LILRB5O75023 590 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 CD3GP09693 182 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 RAB5AP20339 215 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 GCGRP47871 477 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 PTH2RP49190 550 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 PPT1P50897 306 aa6.76□□□□□ -1.33
CNOT1-216ENST00000569240 CRYBB1P53674 252 aaPredicted RBP6.76□□□□□ -1.33
CNOT1-216ENST00000569240 LCN6P62502 163 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms