RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 NAXEQ8NCW5 288 aa16.96■□□□□ 0.31
LINC01238-205ENST00000567549 ACMSDQ8TDX5 336 aa16.96■□□□□ 0.31
LINC01238-205ENST00000567549 WNT2BQ93097 391 aa16.96■□□□□ 0.31
LINC01238-205ENST00000567549 BTBD9Q96Q07 612 aa16.96■□□□□ 0.31
LINC01238-205ENST00000567549 ALPK1Q96QP1 1244 aa16.96■□□□□ 0.31
LINC01238-205ENST00000567549 YIPF4Q9BSR8 244 aa16.96■□□□□ 0.31
LINC01238-205ENST00000567549 OR2B2Q9GZK3 357 aa16.96■□□□□ 0.31
LINC01238-205ENST00000567549 MRTO4Q9UKD2 239 aaKnown RBP16.96■□□□□ 0.31
LINC01238-205ENST00000567549 MAPRE3Q9UPY8 281 aa16.96■□□□□ 0.31
LINC01238-205ENST00000567549 MRPS18CQ9Y3D5 142 aaKnown RBP16.96■□□□□ 0.31
LINC01238-205ENST00000567549 ATP8B1O43520 1251 aa16.95■□□□□ 0.3
LINC01238-205ENST00000567549 CBX7O95931 251 aa16.95■□□□□ 0.3
LINC01238-205ENST00000567549 GSTA1P08263 222 aa16.95■□□□□ 0.3
LINC01238-205ENST00000567549 IMPDH1P20839 514 aa16.95■□□□□ 0.3
LINC01238-205ENST00000567549 CLK3P49761 638 aaKnown RBP16.95■□□□□ 0.3
LINC01238-205ENST00000567549 ZNF136P52737 540 aa16.95■□□□□ 0.3
LINC01238-205ENST00000567549 NAGLUP54802 743 aa16.95■□□□□ 0.3
LINC01238-205ENST00000567549 MGAT2Q10469 447 aa16.95■□□□□ 0.3
LINC01238-205ENST00000567549 LCP2Q13094 533 aa16.95■□□□□ 0.3
LINC01238-205ENST00000567549 ZNF678Q5SXM1 525 aa16.95■□□□□ 0.3
LINC01238-205ENST00000567549 YRDCQ86U90 279 aaKnown RBP16.95■□□□□ 0.3
LINC01238-205ENST00000567549 FAM9CQ8IZT9 166 aa16.95■□□□□ 0.3
LINC01238-205ENST00000567549 CNRIP1Q96F85 164 aaPredicted RBP16.95■□□□□ 0.3
LINC01238-205ENST00000567549 SLC35A4Q96G79 324 aa16.95■□□□□ 0.3
LINC01238-205ENST00000567549 BBS4Q96RK4 519 aa16.95■□□□□ 0.3
LINC01238-205ENST00000567549 UCN2Q96RP3 112 aa16.95■□□□□ 0.3
LINC01238-205ENST00000567549 SDHAF3Q9NRP4 125 aa16.95■□□□□ 0.3
LINC01238-205ENST00000567549 CCM2LQ9NUG4 571 aaPredicted RBP16.95■□□□□ 0.3
LINC01238-205ENST00000567549 TAS2R10Q9NYW0 307 aa16.95■□□□□ 0.3
LINC01238-205ENST00000567549 DKKL1Q9UK85 242 aa16.95■□□□□ 0.3
LINC01238-205ENST00000567549 DTX4Q9Y2E6 619 aa16.95■□□□□ 0.3
LINC01238-205ENST00000567549 DLGAP4Q9Y2H0 992 aa16.95■□□□□ 0.3
LINC01238-205ENST00000567549 GPR55Q9Y2T6 319 aaPredicted RBP16.95■□□□□ 0.3
LINC01238-205ENST00000567549 WBP11Q9Y2W2 641 aaKnown RBP16.95■□□□□ 0.3
LINC01238-205ENST00000567549 OR10H1Q9Y4A9 318 aa16.95■□□□□ 0.3
LINC01238-205ENST00000567549 WIF1Q9Y5W5 379 aa16.95■□□□□ 0.3
LINC01238-205ENST00000567549 DOCK7Q96N67 2140 aa16.94■□□□□ 0.3
LINC01238-205ENST00000567549 UGT2B11O75310 529 aa16.94■□□□□ 0.3
LINC01238-205ENST00000567549 PCSK2P16519 638 aa16.94■□□□□ 0.3
LINC01238-205ENST00000567549 EMDP50402 254 aa16.94■□□□□ 0.3
LINC01238-205ENST00000567549 PNLIPRP2P54317 469 aa16.94■□□□□ 0.3
LINC01238-205ENST00000567549 PSMD4P55036 377 aaKnown RBP16.94■□□□□ 0.3
LINC01238-205ENST00000567549 EEFSECP57772 596 aaKnown RBP16.94■□□□□ 0.3
LINC01238-205ENST00000567549 ZNHIT3Q15649 155 aaPredicted RBP16.94■□□□□ 0.3
LINC01238-205ENST00000567549 TRMT12Q53H54 448 aaKnown RBP16.94■□□□□ 0.3
LINC01238-205ENST00000567549 OR2A2Q6IF42 318 aa16.94■□□□□ 0.3
LINC01238-205ENST00000567549 CDC20BQ86Y33 519 aa16.94■□□□□ 0.3
LINC01238-205ENST00000567549 TGIF2LYQ8IUE0 185 aa16.94■□□□□ 0.3
LINC01238-205ENST00000567549 CCDC116Q8IYX3 515 aa16.94■□□□□ 0.3
LINC01238-205ENST00000567549 TMBIM1Q969X1 311 aa16.94■□□□□ 0.3
LINC01238-205ENST00000567549 MBD6Q96DN6 1003 aa16.94■□□□□ 0.3
LINC01238-205ENST00000567549 ZNF681Q96N22 645 aa16.94■□□□□ 0.3
LINC01238-205ENST00000567549 NODALQ96S42 347 aa16.94■□□□□ 0.3
LINC01238-205ENST00000567549 IQCGQ9H095 443 aaKnown RBP16.94■□□□□ 0.3
LINC01238-205ENST00000567549 EPB41L4BQ9H329 900 aa16.94■□□□□ 0.3
LINC01238-205ENST00000567549 SERHLQ9NQF3 203 aa16.94■□□□□ 0.3
LINC01238-205ENST00000567549 MIEF1Q9NQG6 463 aa16.94■□□□□ 0.3
LINC01238-205ENST00000567549 NDRG3Q9UGV2 375 aa16.94■□□□□ 0.3
LINC01238-205ENST00000567549 CBLCQ9ULV8 474 aa16.94■□□□□ 0.3
LINC01238-205ENST00000567549 AKAP9Q99996 3911 aa16.94■□□□□ 0.3
LINC01238-205ENST00000567549 LINC01387J3KSC0 135 aa16.93■□□□□ 0.3
LINC01238-205ENST00000567549 CASKO14936 926 aa16.93■□□□□ 0.3
LINC01238-205ENST00000567549 PLOD3O60568 738 aa16.93■□□□□ 0.3
LINC01238-205ENST00000567549 RCBTB2O95199 551 aa16.93■□□□□ 0.3
LINC01238-205ENST00000567549 RAF1P04049 648 aa16.93■□□□□ 0.3
LINC01238-205ENST00000567549 CRHP06850 196 aa16.93■□□□□ 0.3
LINC01238-205ENST00000567549 IL3P08700 152 aa16.93■□□□□ 0.3
LINC01238-205ENST00000567549 TSPAN8P19075 237 aa16.93■□□□□ 0.3
LINC01238-205ENST00000567549 TIA1P31483 386 aaKnown RBP eCLIP16.93■□□□□ 0.3
LINC01238-205ENST00000567549 HMGCS1Q01581 520 aa16.93■□□□□ 0.3
LINC01238-205ENST00000567549 IMPG1Q17R60 797 aa16.93■□□□□ 0.3
LINC01238-205ENST00000567549 ZNF628Q5EBL2 1059 aa16.93■□□□□ 0.3
LINC01238-205ENST00000567549 GALNT18Q6P9A2 607 aa16.93■□□□□ 0.3
LINC01238-205ENST00000567549 LARP4Q71RC2 724 aaKnown RBP eCLIP16.93■□□□□ 0.3
LINC01238-205ENST00000567549 TRIM42Q8IWZ5 723 aa16.93■□□□□ 0.3
LINC01238-205ENST00000567549 SFXN2Q96NB2 322 aa16.93■□□□□ 0.3
LINC01238-205ENST00000567549 RBM24Q9BX46 236 aaKnown RBP16.93■□□□□ 0.3
LINC01238-205ENST00000567549 GALNT9Q9HCQ5 603 aa16.93■□□□□ 0.3
LINC01238-205ENST00000567549 SLC35C2Q9NQQ7 365 aa16.93■□□□□ 0.3
LINC01238-205ENST00000567549 STOML1Q9UBI4 398 aa16.93■□□□□ 0.3
LINC01238-205ENST00000567549 DCDC2Q9UHG0 476 aa16.93■□□□□ 0.3
LINC01238-205ENST00000567549 GRID1Q9ULK0 1009 aa16.93■□□□□ 0.3
LINC01238-205ENST00000567549 SERTM1A2A2V5 107 aa16.92■□□□□ 0.3
LINC01238-205ENST00000567549 TTC36A6NLP5 189 aa16.92■□□□□ 0.3
LINC01238-205ENST00000567549 CRCPO75575 148 aa16.92■□□□□ 0.3
LINC01238-205ENST00000567549 NTSP30990 170 aa16.92■□□□□ 0.3
LINC01238-205ENST00000567549 PRKAA2P54646 552 aa16.92■□□□□ 0.3
LINC01238-205ENST00000567549 MRPS35P82673 323 aaKnown RBP16.92■□□□□ 0.3
LINC01238-205ENST00000567549 ZNF763Q0D2J5 394 aa16.92■□□□□ 0.3
LINC01238-205ENST00000567549 KEAP1Q14145 624 aa16.92■□□□□ 0.3
LINC01238-205ENST00000567549 FGFBP1Q14512 234 aa16.92■□□□□ 0.3
LINC01238-205ENST00000567549 GANABQ14697 944 aaKnown RBP16.92■□□□□ 0.3
LINC01238-205ENST00000567549 LTB4RQ15722 352 aa16.92■□□□□ 0.3
LINC01238-205ENST00000567549 CEBPEQ15744 281 aa16.92■□□□□ 0.3
LINC01238-205ENST00000567549 BCL2A1Q16548 175 aa16.92■□□□□ 0.3
LINC01238-205ENST00000567549 SPDYAQ5MJ70 313 aa16.92■□□□□ 0.3
LINC01238-205ENST00000567549 RPS27LQ71UM5 84 aaKnown RBP16.92■□□□□ 0.3
LINC01238-205ENST00000567549 P4HA3Q7Z4N8 544 aa16.92■□□□□ 0.3
LINC01238-205ENST00000567549 GRAMD2AQ8IUY3 354 aa16.92■□□□□ 0.3
LINC01238-205ENST00000567549 OR4K17Q8NGC6 315 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms