RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 RPF1Q9H9Y2 349 aaKnown RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 EXOSC3Q9NQT5 275 aaKnown RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 FTSJ1Q9UET6 329 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 ATAD5Q96QE3 1844 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 TRBV2A0A0J9YWF9 115 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 GLYATL1P3A0A0U1RQE8 302 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 SLC19A2O60779 497 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 RGS9O75916 674 aaPredicted RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 PRAMEF1O95521 474 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 CBX7O95931 251 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 SCG5P05408 212 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 URODP06132 367 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 ZDHHC11BP0C7U3 371 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 HAPLN1P10915 354 aaPredicted RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 ANXA3P12429 323 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 ARL2P36404 184 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 CD96P40200 585 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 ZNF81P51508 661 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 ST8SIA6P61647 398 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 RANP62826 216 aaKnown RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 CAMK2DQ13557 499 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 SF3A2Q15428 464 aaKnown RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 LGALSLQ3ZCW2 172 aaPredicted RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 SPIN4Q56A73 249 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 FAM74A1Q5RGS3 127 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 RNF165Q6ZSG1 346 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 LRRTM3Q86VH5 581 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 ZNF514Q96K75 400 aaPredicted RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 SLC5A7Q9GZV3 580 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 AMBNQ9NP70 447 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 MARCH4Q9P2E8 410 aaPredicted RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 GPR160Q9UJ42 338 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 IKZF3Q9UKT9 509 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 SF3B6Q9Y3B4 125 aaKnown RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 HAS3O00219 553 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 CHEK1O14757 476 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 HSBP1O75506 76 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 CBR3O75828 277 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 FABP1P07148 127 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 VIPR1P32241 457 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 TCTE1Q5JU00 501 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 PHF19Q5T6S3 580 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 DNAJA3Q96EY1 480 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 ZNF419Q96HQ0 510 aaPredicted RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 ZNF668Q96K58 619 aaPredicted RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 TWSG1Q9GZX9 223 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 ISYNA1Q9NPH2 558 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 TO15178 435 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 KLK8O60259 260 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 PCDH8O95206 1070 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 IGHV2-70P01814 119 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 SULT1A3P0DMM9 295 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 SULT1A4P0DMN0 295 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 RAB5BP61020 215 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 PLA2G7Q13093 441 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 PTPRCAPQ14761 206 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 OPCMLQ14982 345 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 OR4D1Q15615 310 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 CRY2Q49AN0 593 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 USP39Q53GS9 565 aaKnown RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 C3orf38Q5JPI3 329 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 MFSD14BQ5SR56 506 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 AADACL4Q5VUY2 407 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 CBLL1Q75N03 491 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 GPR142Q7Z601 462 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 KIAA0907Q7Z7F0 614 aaPredicted RBP2.77□□□□□ -1.97
CHD9-218ENST00000566029 ZNF605Q86T29 641 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 NXPE2Q96DL1 559 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 TMEM134Q9H6X4 195 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 SYNPO2LQ9H987 977 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 KCTD3Q9Y597 815 aa2.77□□□□□ -1.97
CHD9-218ENST00000566029 ARGFXA6NJG6 315 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 NIPSNAP2O75323 286 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 SIX6O95475 246 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 CRKLP46109 303 aaKnown RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 FGFBP1Q14512 234 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 MELKQ14680 651 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 ZNF549Q6P9A3 640 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 ZNF813Q6ZN06 617 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 QSOX2Q6ZRP7 698 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 Q6ZSR9 355 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 FAM131BQ86XD5 332 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 LDLRAD3Q86YD5 345 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 CMIPQ8IY22 773 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 ACBD4Q8NC06 268 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 UBA3Q8TBC4 463 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 OIT3Q8WWZ8 545 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 ZBED3Q96IU2 234 aaPredicted RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 KATNB1Q9BVA0 655 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 PCBD2Q9H0N5 130 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 GLOD4Q9HC38 313 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 UPB1Q9UBR1 384 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 ADAMTSL3P82987 1691 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 YDJCA8MPS7 323 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 IDSB3KWA1 339 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 SLC28A1O00337 649 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 TERTO14746 1132 aaKnown RBP2.76□□□□□ -1.97
CHD9-218ENST00000566029 SCN2BO60939 215 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 ECI2O75521 394 aa2.76□□□□□ -1.97
CHD9-218ENST00000566029 CST1P01037 141 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms