RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 TAS2R10Q9NYW0 307 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 PRODH2Q9UF12 536 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 TRPS1Q9UHF7 1281 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 FBXL2Q9UKC9 423 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 UTS2RQ9UKP6 389 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 EDARQ9UNE0 448 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 SNX6Q9UNH7 406 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 MRPS18CQ9Y3D5 142 aaKnown RBP7.79□□□□□ -1.16
CAPN3-213ENST00000565173 DNHD1Q96M86 4753 aa7.79□□□□□ -1.16
CAPN3-213ENST00000565173 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 CLCA1A8K7I4 914 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 C17orf51A8MQB3 221 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 A8MXE2 369 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 POC1B-GALNT4F8VUJ3 575 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 PLOD2O00469 737 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 DLX3O60479 287 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 TNFSF13O75888 250 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 GOSR1O95249 250 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 TGM6O95932 706 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 RAF1P04049 648 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 IL3P08700 152 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 HSD3B1P14060 373 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 CD53P19397 219 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 HSD3B2P26439 372 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 GCAP28676 217 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 ALDH9A1P49189 494 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 CLDN18P56856 261 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 CORO7P57737 925 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 B3GALT5-AS1P59052 145 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 PPP2R2AP63151 447 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 SRYQ05066 204 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 WHAMMP3Q1A5X7 153 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 PRSS53Q2L4Q9 553 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 ZNF678Q5SXM1 525 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 OR5M10Q6IEU7 315 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 ENPP6Q6UWR7 440 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 TIFABQ6ZNK6 161 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 LUZP2Q86TE4 346 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 MMGT1Q8N4V1 131 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 CDYL2Q8N8U2 506 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 NOA1Q8NC60 698 aaKnown RBP7.78□□□□□ -1.16
CAPN3-213ENST00000565173 WFDC11Q8NEX6 87 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 OR4N2Q8NGD1 307 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 OR9A2Q8NGT5 310 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 OR14L1PQ8NHC6 308 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 RDH11Q8TC12 318 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 KAT2AQ92830 837 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 WNT2BQ93097 391 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 INTS12Q96CB8 462 aaKnown RBP7.78□□□□□ -1.16
CAPN3-213ENST00000565173 TMCO6Q96DC7 493 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 ERP27Q96DN0 273 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 APIPQ96GX9 242 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 ZFP3Q96NJ6 502 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 ADOQ96SZ5 270 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 TM9SF2Q99805 663 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 SFXN3Q9BWM7 321 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 FAIM2Q9BWQ8 316 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 ACPTQ9BZG2 426 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 NMRK1Q9NWW6 199 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 KLRF1Q9NZS2 232 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 TMEM216Q9P0N5 145 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 MCM8Q9UJA3 840 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 DLGAP4Q9Y2H0 992 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 ZNF780BQ9Y6R6 833 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 ZANQ9Y493 2812 aa7.78□□□□□ -1.16
CAPN3-213ENST00000565173 NSD1Q96L73 2696 aaPredicted RBP7.77□□□□□ -1.16
CAPN3-213ENST00000565173 H0Y3Z8 333 aa7.77□□□□□ -1.17
CAPN3-213ENST00000565173 HCRTR2O43614 444 aa7.77□□□□□ -1.17
CAPN3-213ENST00000565173 PLOD3O60568 738 aa7.77□□□□□ -1.17
CAPN3-213ENST00000565173 ABCB7O75027 752 aa7.77□□□□□ -1.17
CAPN3-213ENST00000565173 ERN1O75460 977 aaKnown RBP7.77□□□□□ -1.17
CAPN3-213ENST00000565173 REM1O75628 298 aa7.77□□□□□ -1.17
CAPN3-213ENST00000565173 BCAS2O75934 225 aaPredicted RBP7.77□□□□□ -1.17
CAPN3-213ENST00000565173 SNRPAP09012 282 aaKnown RBP7.77□□□□□ -1.17
CAPN3-213ENST00000565173 DRD2P14416 443 aa7.77□□□□□ -1.17
CAPN3-213ENST00000565173 ZNF708P17019 499 aa7.77□□□□□ -1.17
CAPN3-213ENST00000565173 IMPDH1P20839 514 aa7.77□□□□□ -1.17
CAPN3-213ENST00000565173 CHMP24386 653 aa7.77□□□□□ -1.17
CAPN3-213ENST00000565173 SRD5A2P31213 254 aa7.77□□□□□ -1.17
CAPN3-213ENST00000565173 PNLIPRP2P54317 469 aa7.77□□□□□ -1.17
CAPN3-213ENST00000565173 CLDN15P56746 228 aa7.77□□□□□ -1.17
CAPN3-213ENST00000565173 CSTF3Q12996 717 aaKnown RBP7.77□□□□□ -1.17
CAPN3-213ENST00000565173 RASA2Q15283 850 aa7.77□□□□□ -1.17
CAPN3-213ENST00000565173 BCL2A1Q16548 175 aa7.77□□□□□ -1.17
CAPN3-213ENST00000565173 GALNT18Q6P9A2 607 aa7.77□□□□□ -1.17
CAPN3-213ENST00000565173 AAGABQ6PD74 315 aa7.77□□□□□ -1.17
CAPN3-213ENST00000565173 IFNEQ86WN2 208 aa7.77□□□□□ -1.17
CAPN3-213ENST00000565173 CXorf67Q86X51 503 aaPredicted RBP7.77□□□□□ -1.17
CAPN3-213ENST00000565173 GCNT2Q8N0V5 402 aa7.77□□□□□ -1.17
CAPN3-213ENST00000565173 FADS6Q8N9I5 356 aa7.77□□□□□ -1.17
CAPN3-213ENST00000565173 OR7G2Q8NG99 324 aa7.77□□□□□ -1.17
CAPN3-213ENST00000565173 UHMK1Q8TAS1 419 aaKnown RBP7.77□□□□□ -1.17
CAPN3-213ENST00000565173 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.77□□□□□ -1.17
CAPN3-213ENST00000565173 C16orf78Q8WTQ4 265 aa7.77□□□□□ -1.17
CAPN3-213ENST00000565173 IFT81Q8WYA0 676 aa7.77□□□□□ -1.17
CAPN3-213ENST00000565173 STARD4Q96DR4 205 aa7.77□□□□□ -1.17
CAPN3-213ENST00000565173 TMEM237Q96Q45 408 aa7.77□□□□□ -1.17
CAPN3-213ENST00000565173 ZNF382Q96SR6 550 aa7.77□□□□□ -1.17
CAPN3-213ENST00000565173 FMO2Q99518 471 aa7.77□□□□□ -1.17
CAPN3-213ENST00000565173 TSPYL1Q9H0U9 437 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms