RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 AKAP10O43572 662 aa18.2■□□□□ 0.5
CMTM3-207ENST00000564060 PEX11AO75192 247 aa18.2■□□□□ 0.5
CMTM3-207ENST00000564060 REM1O75628 298 aa18.2■□□□□ 0.5
CMTM3-207ENST00000564060 LRATO95237 230 aa18.2■□□□□ 0.5
CMTM3-207ENST00000564060 GDF1P27539 372 aa18.2■□□□□ 0.5
CMTM3-207ENST00000564060 HHATQ5VTY9 493 aa18.2■□□□□ 0.5
CMTM3-207ENST00000564060 NATD1Q8N6N6 113 aa18.2■□□□□ 0.5
CMTM3-207ENST00000564060 CLHC1Q8NHS4 586 aa18.2■□□□□ 0.5
CMTM3-207ENST00000564060 HGDQ93099 445 aa18.2■□□□□ 0.5
CMTM3-207ENST00000564060 TMBIM1Q969X1 311 aa18.2■□□□□ 0.5
CMTM3-207ENST00000564060 ELP4Q96EB1 424 aa18.2■□□□□ 0.5
CMTM3-207ENST00000564060 SLC35A4Q96G79 324 aa18.2■□□□□ 0.5
CMTM3-207ENST00000564060 ANKRA2Q9H9E1 313 aa18.2■□□□□ 0.5
CMTM3-207ENST00000564060 ACSS1Q9NUB1 689 aaPredicted RBP18.2■□□□□ 0.5
CMTM3-207ENST00000564060 MRTO4Q9UKD2 239 aaKnown RBP18.2■□□□□ 0.5
CMTM3-207ENST00000564060 KLF2Q9Y5W3 355 aaPredicted RBP18.2■□□□□ 0.5
CMTM3-207ENST00000564060 ARHGAP21Q5T5U3 1957 aa18.2■□□□□ 0.5
CMTM3-207ENST00000564060 NPIPA2E9PIF3 369 aa18.19■□□□□ 0.5
CMTM3-207ENST00000564060 NPIPA3F8WFD2 350 aa18.19■□□□□ 0.5
CMTM3-207ENST00000564060 UPK1AO00322 258 aa18.19■□□□□ 0.5
CMTM3-207ENST00000564060 UGT2B11O75310 529 aa18.19■□□□□ 0.5
CMTM3-207ENST00000564060 SLC1A6P48664 564 aa18.19■□□□□ 0.5
CMTM3-207ENST00000564060 PNLIPRP2P54317 469 aa18.19■□□□□ 0.5
CMTM3-207ENST00000564060 MANFP55145 182 aaKnown RBP18.19■□□□□ 0.5
CMTM3-207ENST00000564060 CORO7P57737 925 aa18.19■□□□□ 0.5
CMTM3-207ENST00000564060 ADORA2A-AS1P86434 159 aa18.19■□□□□ 0.5
CMTM3-207ENST00000564060 HSPB3Q12988 150 aa18.19■□□□□ 0.5
CMTM3-207ENST00000564060 PRSS53Q2L4Q9 553 aa18.19■□□□□ 0.5
CMTM3-207ENST00000564060 SMU1Q2TAY7 513 aa18.19■□□□□ 0.5
CMTM3-207ENST00000564060 C6orf136Q5SQH8 315 aa18.19■□□□□ 0.5
CMTM3-207ENST00000564060 WLSQ5T9L3 541 aa18.19■□□□□ 0.5
CMTM3-207ENST00000564060 BICRALQ6AI39 1079 aa18.19■□□□□ 0.5
CMTM3-207ENST00000564060 SLC44A2Q8IWA5 706 aaPredicted RBP18.19■□□□□ 0.5
CMTM3-207ENST00000564060 OR1J4Q8NGS1 313 aa18.19■□□□□ 0.5
CMTM3-207ENST00000564060 DMRTA2Q96SC8 542 aa18.19■□□□□ 0.5
CMTM3-207ENST00000564060 PAIP2Q9BPZ3 127 aaKnown RBP18.19■□□□□ 0.5
CMTM3-207ENST00000564060 C3orf14Q9HBI5 128 aa18.19■□□□□ 0.5
CMTM3-207ENST00000564060 Q9N2J8 555 aa18.19■□□□□ 0.5
CMTM3-207ENST00000564060 ATAD3AQ9NVI7 634 aa18.19■□□□□ 0.5
CMTM3-207ENST00000564060 COQ3Q9NZJ6 369 aa18.19■□□□□ 0.5
CMTM3-207ENST00000564060 BAIAP2L1Q9UHR4 511 aa18.19■□□□□ 0.5
CMTM3-207ENST00000564060 MAPRE3Q9UPY8 281 aa18.19■□□□□ 0.5
CMTM3-207ENST00000564060 EIF3LQ9Y262 564 aaKnown RBP18.19■□□□□ 0.5
CMTM3-207ENST00000564060 LIPGQ9Y5X9 500 aa18.19■□□□□ 0.5
CMTM3-207ENST00000564060 PRAMEF25A6NGN4 478 aa18.18■□□□□ 0.5
CMTM3-207ENST00000564060 SCAMP2O15127 329 aaKnown RBP18.18■□□□□ 0.5
CMTM3-207ENST00000564060 ZNHIT1O43257 154 aa18.18■□□□□ 0.5
CMTM3-207ENST00000564060 ITM2AO43736 263 aa18.18■□□□□ 0.5
CMTM3-207ENST00000564060 PSMG1O95456 288 aa18.18■□□□□ 0.5
CMTM3-207ENST00000564060 CELA3AP09093 270 aa18.18■□□□□ 0.5
CMTM3-207ENST00000564060 RFPL3SP0C7P2 107 aa18.18■□□□□ 0.5
CMTM3-207ENST00000564060 FRKP42685 505 aaPredicted RBP18.18■□□□□ 0.5
CMTM3-207ENST00000564060 RPL14P50914 215 aaKnown RBP18.18■□□□□ 0.5
CMTM3-207ENST00000564060 SLC18A1P54219 525 aa18.18■□□□□ 0.5
CMTM3-207ENST00000564060 PSMD4P55036 377 aaKnown RBP18.18■□□□□ 0.5
CMTM3-207ENST00000564060 PSG6Q00889 435 aa18.18■□□□□ 0.5
CMTM3-207ENST00000564060 STX3Q13277 289 aa18.18■□□□□ 0.5
CMTM3-207ENST00000564060 CYP27C1Q4G0S4 372 aa18.18■□□□□ 0.5
CMTM3-207ENST00000564060 ANKRD26P1Q6NSI1 321 aa18.18■□□□□ 0.5
CMTM3-207ENST00000564060 NPSR1Q6W5P4 371 aa18.18■□□□□ 0.5
CMTM3-207ENST00000564060 ZNF781Q8N8C0 355 aa18.18■□□□□ 0.5
CMTM3-207ENST00000564060 ANKRD42Q8N9B4 389 aa18.18■□□□□ 0.5
CMTM3-207ENST00000564060 CEP70Q8NHQ1 597 aa18.18■□□□□ 0.5
CMTM3-207ENST00000564060 NEIL3Q8TAT5 605 aa18.18■□□□□ 0.5
CMTM3-207ENST00000564060 CIDECQ96AQ7 238 aaPredicted RBP18.18■□□□□ 0.5
CMTM3-207ENST00000564060 C3orf30Q96M34 536 aa18.18■□□□□ 0.5
CMTM3-207ENST00000564060 PRPF18Q99633 342 aaKnown RBP18.18■□□□□ 0.5
CMTM3-207ENST00000564060 ATP6V1HQ9UI12 483 aa18.18■□□□□ 0.5
CMTM3-207ENST00000564060 ACAD8Q9UKU7 415 aa18.18■□□□□ 0.5
CMTM3-207ENST00000564060 C15orf41Q9Y2V0 281 aa18.18■□□□□ 0.5
CMTM3-207ENST00000564060 PCDHGB3Q9Y5G1 929 aa18.18■□□□□ 0.5
CMTM3-207ENST00000564060 CACNA1CQ13936 2221 aa18.18■□□□□ 0.5
CMTM3-207ENST00000564060 TMEM120BA0PK00 339 aa18.17■□□□□ 0.5
CMTM3-207ENST00000564060 PRSS44E7EML9 344 aa18.17■□□□□ 0.5
CMTM3-207ENST00000564060 TSPAN2O60636 221 aa18.17■□□□□ 0.5
CMTM3-207ENST00000564060 WDR1O75083 606 aa18.17■□□□□ 0.5
CMTM3-207ENST00000564060 PRPS1L1P21108 318 aa18.17■□□□□ 0.5
CMTM3-207ENST00000564060 BGNP21810 368 aa18.17■□□□□ 0.5
CMTM3-207ENST00000564060 MPP2Q14168 576 aa18.17■□□□□ 0.5
CMTM3-207ENST00000564060 MLC1Q15049 377 aa18.17■□□□□ 0.5
CMTM3-207ENST00000564060 PDCD2Q16342 344 aaPredicted RBP18.17■□□□□ 0.5
CMTM3-207ENST00000564060 DECR1Q16698 335 aa18.17■□□□□ 0.5
CMTM3-207ENST00000564060 VPS26BQ4G0F5 336 aa18.17■□□□□ 0.5
CMTM3-207ENST00000564060 GXYLT1Q4G148 440 aa18.17■□□□□ 0.5
CMTM3-207ENST00000564060 ZNF385BQ569K4 471 aa18.17■□□□□ 0.5
CMTM3-207ENST00000564060 IL23RQ5VWK5 629 aa18.17■□□□□ 0.5
CMTM3-207ENST00000564060 TIGD3Q6B0B8 471 aa18.17■□□□□ 0.5
CMTM3-207ENST00000564060 ANGPTL8Q6UXH0 198 aa18.17■□□□□ 0.5
CMTM3-207ENST00000564060 C3P1Q6ZMU1 363 aa18.17■□□□□ 0.5
CMTM3-207ENST00000564060 LARP4Q71RC2 724 aaKnown RBP eCLIP18.17■□□□□ 0.5
CMTM3-207ENST00000564060 ZNF551Q7Z340 670 aaPredicted RBP18.17■□□□□ 0.5
CMTM3-207ENST00000564060 NODALQ96S42 347 aa18.17■□□□□ 0.5
CMTM3-207ENST00000564060 ADOQ96SZ5 270 aa18.17■□□□□ 0.5
CMTM3-207ENST00000564060 LMF2Q9BU23 707 aaKnown RBP18.17■□□□□ 0.5
CMTM3-207ENST00000564060 C1orf50Q9BV19 199 aa18.17■□□□□ 0.5
CMTM3-207ENST00000564060 NKIRAS1Q9NYS0 192 aa18.17■□□□□ 0.5
CMTM3-207ENST00000564060 NOP53Q9NZM5 478 aaKnown RBP18.17■□□□□ 0.5
CMTM3-207ENST00000564060 HAO1Q9UJM8 370 aa18.17■□□□□ 0.5
CMTM3-207ENST00000564060 UTP20O75691 2785 aaKnown RBP18.16■□□□□ 0.5
CMTM3-207ENST00000564060 ADAM10O14672 748 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms