RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 OR2W6PQ8NHA6 318 aa9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 SENP5Q96HI0 755 aaPredicted RBP9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 FOPNLQ96NB1 174 aa9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 CARD6Q9BX69 1037 aa9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 WWTR1Q9GZV5 400 aa9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 GTF3C3Q9Y5Q9 886 aa9.19□□□□□ -0.94
HDGFL3-204ENST00000563790 MYOCOSA0A1B0GUC4 107 aa9.18□□□□□ -0.94
HDGFL3-204ENST00000563790 SRRM5B3KS81 715 aa9.18□□□□□ -0.94
HDGFL3-204ENST00000563790 B9A039 149 aa9.18□□□□□ -0.94
HDGFL3-204ENST00000563790 ZIC3O60481 467 aa9.18□□□□□ -0.94
HDGFL3-204ENST00000563790 SMIM10L1P0DMW3 83 aa9.18□□□□□ -0.94
HDGFL3-204ENST00000563790 ZNF17P17021 662 aa9.18□□□□□ -0.94
HDGFL3-204ENST00000563790 TNNI3P19429 210 aa9.18□□□□□ -0.94
HDGFL3-204ENST00000563790 TMED10P49755 219 aaKnown RBP9.18□□□□□ -0.94
HDGFL3-204ENST00000563790 ZNF83P51522 516 aa9.18□□□□□ -0.94
HDGFL3-204ENST00000563790 COPS2P61201 443 aa9.18□□□□□ -0.94
HDGFL3-204ENST00000563790 DYNLT1P63172 113 aa9.18□□□□□ -0.94
HDGFL3-204ENST00000563790 HSPG2P98160 4391 aa9.18□□□□□ -0.94
HDGFL3-204ENST00000563790 MPP3Q13368 585 aa9.18□□□□□ -0.94
HDGFL3-204ENST00000563790 TMED2Q15363 201 aa9.18□□□□□ -0.94
HDGFL3-204ENST00000563790 FAM205BPQ63HN1 556 aa9.18□□□□□ -0.94
HDGFL3-204ENST00000563790 MFSD12Q6NUT3 480 aa9.18□□□□□ -0.94
HDGFL3-204ENST00000563790 BLOC1S3Q6QNY0 202 aa9.18□□□□□ -0.94
HDGFL3-204ENST00000563790 C9orf139Q6ZV77 190 aa9.18□□□□□ -0.94
HDGFL3-204ENST00000563790 TDRPQ86YL5 185 aa9.18□□□□□ -0.94
HDGFL3-204ENST00000563790 GSDMBQ8TAX9 411 aa9.18□□□□□ -0.94
HDGFL3-204ENST00000563790 ZNF480Q8WV37 535 aa9.18□□□□□ -0.94
HDGFL3-204ENST00000563790 SKA2Q8WVK7 121 aaPredicted RBP9.18□□□□□ -0.94
HDGFL3-204ENST00000563790 SMIM10Q96HG1 83 aa9.18□□□□□ -0.94
HDGFL3-204ENST00000563790 GAL3ST4Q96RP7 486 aa9.18□□□□□ -0.94
HDGFL3-204ENST00000563790 FERMT1Q9BQL6 677 aa9.18□□□□□ -0.94
HDGFL3-204ENST00000563790 TSSK1BQ9BXA7 367 aa9.18□□□□□ -0.94
HDGFL3-204ENST00000563790 PLK3Q9H4B4 646 aa9.18□□□□□ -0.94
HDGFL3-204ENST00000563790 METTL7AQ9H8H3 244 aa9.18□□□□□ -0.94
HDGFL3-204ENST00000563790 MRPS33Q9Y291 106 aaKnown RBP9.18□□□□□ -0.94
HDGFL3-204ENST00000563790 SPACA6W5XKT8 324 aa9.18□□□□□ -0.94
HDGFL3-204ENST00000563790 SEC14L5O43304 696 aa9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 OR1I1O60431 355 aa9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 PGM3O95394 542 aa9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 SLC16A8O95907 504 aa9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 H2AFZP0C0S5 128 aa9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 TMEM253P0C7T8 217 aa9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 MYZAPP0CAP1 466 aa9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 TNNT1P13805 278 aa9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 ZFXP17010 805 aaPredicted RBP9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 PSMA3P25788 255 aa9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 SERPINF1P36955 418 aa9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 PTGDSP41222 190 aa9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 NR2C2P49116 596 aa9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 RPS3AP61247 264 aaKnown RBP9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 SLC18A3Q16572 532 aa9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 THEMIS2Q5TEJ8 643 aa9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 H2AFVQ71UI9 128 aa9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 SATL1Q86VE3 508 aa9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 RFX6Q8HWS3 928 aa9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 LRRC56Q8IYG6 542 aaPredicted RBP9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 OR4S1Q8NGB4 309 aa9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 SLC35G2Q8TBE7 412 aa9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 NT5CQ8TCD5 201 aa9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 TFB1MQ8WVM0 346 aaKnown RBP9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 SLC47A1Q96FL8 570 aa9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 DNAJC1Q96KC8 554 aaKnown RBP9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 QKIQ96PU8 341 aaKnown RBP eCLIP9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 PRRG4Q9BZD6 226 aa9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 CHIAQ9BZP6 476 aa9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 MS4A7Q9GZW8 240 aaPredicted RBP9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 SLC6A13Q9NSD5 602 aa9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 ABCF3Q9NUQ8 709 aa9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 FAM120CQ9NX05 1096 aaKnown RBP9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 ASIC3Q9UHC3 531 aa9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 ADAM29Q9UKF5 820 aa9.17□□□□□ -0.94
HDGFL3-204ENST00000563790 CCDC151A5D8V7 595 aa9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 OR5H1A6NKK0 313 aa9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 IQCF5A8MTL0 148 aa9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 CST8O60676 142 aa9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 CTNSO60931 367 aa9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 ICOSLGO75144 302 aa9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 LYZL6O75951 148 aa9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 NTN1O95631 604 aa9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 ENO3P13929 434 aaPredicted RBP9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 IGLL1P15814 213 aa9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 LMO1P25800 156 aa9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 MSX2P35548 267 aaPredicted RBP9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 CLDN20P56880 219 aa9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 RAB8AP61006 207 aa9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 IL1RL1Q01638 556 aa9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 RGS1Q08116 209 aa9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 SNTA1Q13424 505 aa9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 SETDB1Q15047 1291 aa9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 EFNB3Q15768 340 aa9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 C6orf163Q5TEZ5 329 aa9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 ZNF470Q6ECI4 717 aa9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 SLC29A4Q7RTT9 530 aa9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 FBXO30Q8TB52 745 aa9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 ZNF775Q96BV0 537 aaPredicted RBP9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 ITPKCQ96DU7 683 aa9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 VAT1Q99536 393 aa9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 APOL2Q9BQE5 337 aa9.16□□□□□ -0.94
HDGFL3-204ENST00000563790 OSBPL11Q9BXB4 747 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms