RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 KLRF1Q9NZS2 232 aa12.31□□□□□ -0.44
VPS18-203ENST00000558855 JKAMPQ9P055 326 aa12.31□□□□□ -0.44
VPS18-203ENST00000558855 FETUBQ9UGM5 382 aa12.31□□□□□ -0.44
VPS18-203ENST00000558855 SETD2Q9BYW2 2564 aaPredicted RBP12.31□□□□□ -0.44
VPS18-203ENST00000558855 GNG14A0A1W2PPG7 69 aa12.3□□□□□ -0.44
VPS18-203ENST00000558855 CD8B2A6NJW9 211 aa12.3□□□□□ -0.44
VPS18-203ENST00000558855 ACOX3O15254 700 aa12.3□□□□□ -0.44
VPS18-203ENST00000558855 GUCY1B2O75343 617 aa12.3□□□□□ -0.44
VPS18-203ENST00000558855 ULK1O75385 1050 aa12.3□□□□□ -0.44
VPS18-203ENST00000558855 ERN1O75460 977 aaKnown RBP12.3□□□□□ -0.44
VPS18-203ENST00000558855 REM1O75628 298 aa12.3□□□□□ -0.44
VPS18-203ENST00000558855 PROCP04070 461 aa12.3□□□□□ -0.44
VPS18-203ENST00000558855 TAC1P20366 129 aa12.3□□□□□ -0.44
VPS18-203ENST00000558855 MC3RP41968 323 aa12.3□□□□□ -0.44
VPS18-203ENST00000558855 LHX2P50458 406 aa12.3□□□□□ -0.44
VPS18-203ENST00000558855 CLDN15P56746 228 aa12.3□□□□□ -0.44
VPS18-203ENST00000558855 PSG6Q00889 435 aa12.3□□□□□ -0.44
VPS18-203ENST00000558855 SRYQ05066 204 aa12.3□□□□□ -0.44
VPS18-203ENST00000558855 LCP2Q13094 533 aa12.3□□□□□ -0.44
VPS18-203ENST00000558855 FLYWCH1Q4VC44 716 aa12.3□□□□□ -0.44
VPS18-203ENST00000558855 GALNT18Q6P9A2 607 aa12.3□□□□□ -0.44
VPS18-203ENST00000558855 TRMT10CQ7L0Y3 403 aaKnown RBP12.3□□□□□ -0.44
VPS18-203ENST00000558855 TRIM42Q8IWZ5 723 aa12.3□□□□□ -0.44
VPS18-203ENST00000558855 GCNT2Q8N0V5 402 aa12.3□□□□□ -0.44
VPS18-203ENST00000558855 MNS1Q8NEH6 495 aa12.3□□□□□ -0.44
VPS18-203ENST00000558855 CDC26Q8NHZ8 85 aa12.3□□□□□ -0.44
VPS18-203ENST00000558855 LINC01560Q8TB33 94 aa12.3□□□□□ -0.44
VPS18-203ENST00000558855 MTBPQ96DY7 904 aa12.3□□□□□ -0.44
VPS18-203ENST00000558855 EGLN2Q96KS0 407 aa12.3□□□□□ -0.44
VPS18-203ENST00000558855 COL21A1Q96P44 957 aa12.3□□□□□ -0.44
VPS18-203ENST00000558855 FAIM2Q9BWQ8 316 aa12.3□□□□□ -0.44
VPS18-203ENST00000558855 POLDIP3Q9BY77 421 aaKnown RBP12.3□□□□□ -0.44
VPS18-203ENST00000558855 MID1IP1Q9NPA3 183 aa12.3□□□□□ -0.44
VPS18-203ENST00000558855 SLC35C2Q9NQQ7 365 aa12.3□□□□□ -0.44
VPS18-203ENST00000558855 CLCF1Q9UBD9 225 aa12.3□□□□□ -0.44
VPS18-203ENST00000558855 PLEKHA6Q9Y2H5 1048 aa12.3□□□□□ -0.44
VPS18-203ENST00000558855 CCL27Q9Y4X3 112 aa12.3□□□□□ -0.44
VPS18-203ENST00000558855 POLR3HQ9Y535 204 aaPredicted RBP12.3□□□□□ -0.44
VPS18-203ENST00000558855 WIF1Q9Y5W5 379 aa12.3□□□□□ -0.44
VPS18-203ENST00000558855 ZNF780BQ9Y6R6 833 aa12.3□□□□□ -0.44
VPS18-203ENST00000558855 OR6C70A6NIJ9 312 aa12.29□□□□□ -0.44
VPS18-203ENST00000558855 A6NNC1 897 aa12.29□□□□□ -0.44
VPS18-203ENST00000558855 MYO1GB0I1T2 1018 aa12.29□□□□□ -0.44
VPS18-203ENST00000558855 EEF1E1-BLOC1S5C9J1V9 151 aa12.29□□□□□ -0.44
VPS18-203ENST00000558855 H0YC42 278 aa12.29□□□□□ -0.44
VPS18-203ENST00000558855 DVL2O14641 736 aa12.29□□□□□ -0.44
VPS18-203ENST00000558855 EEF1E1O43324 174 aaKnown RBP12.29□□□□□ -0.44
VPS18-203ENST00000558855 ZIC3O60481 467 aa12.29□□□□□ -0.44
VPS18-203ENST00000558855 DIAPH2O60879 1101 aa12.29□□□□□ -0.44
VPS18-203ENST00000558855 IL2RAP01589 272 aa12.29□□□□□ -0.44
VPS18-203ENST00000558855 JUNP05412 331 aaKnown RBP12.29□□□□□ -0.44
VPS18-203ENST00000558855 ANXA4P09525 319 aaPredicted RBP12.29□□□□□ -0.44
VPS18-203ENST00000558855 CYP4B1P13584 511 aa12.29□□□□□ -0.44
VPS18-203ENST00000558855 TPD52P55327 224 aaPredicted RBP12.29□□□□□ -0.44
VPS18-203ENST00000558855 PKNOX1P55347 436 aa12.29□□□□□ -0.44
VPS18-203ENST00000558855 CLDN18P56856 261 aa12.29□□□□□ -0.44
VPS18-203ENST00000558855 ACSM2AQ08AH3 577 aa12.29□□□□□ -0.44
VPS18-203ENST00000558855 ACSM2BQ68CK6 577 aa12.29□□□□□ -0.44
VPS18-203ENST00000558855 FAM71E1Q6IPT2 247 aa12.29□□□□□ -0.44
VPS18-203ENST00000558855 ZYG11AQ6WRX3 759 aa12.29□□□□□ -0.44
VPS18-203ENST00000558855 CDC20BQ86Y33 519 aa12.29□□□□□ -0.44
VPS18-203ENST00000558855 SLC44A2Q8IWA5 706 aaPredicted RBP12.29□□□□□ -0.44
VPS18-203ENST00000558855 PM20D2Q8IYS1 436 aa12.29□□□□□ -0.44
VPS18-203ENST00000558855 CCNYL1Q8N7R7 359 aa12.29□□□□□ -0.44
VPS18-203ENST00000558855 OR14L1PQ8NHC6 308 aa12.29□□□□□ -0.44
VPS18-203ENST00000558855 KLHDC3Q9BQ90 382 aa12.29□□□□□ -0.44
VPS18-203ENST00000558855 CLEC4MQ9H2X3 399 aaPredicted RBP12.29□□□□□ -0.44
VPS18-203ENST00000558855 RYDENQ9NUL5 291 aaKnown RBP12.29□□□□□ -0.44
VPS18-203ENST00000558855 SIRT5Q9NXA8 310 aa12.29□□□□□ -0.44
VPS18-203ENST00000558855 PSMC3IPQ9P2W1 217 aaPredicted RBP12.29□□□□□ -0.44
VPS18-203ENST00000558855 ZNF629Q9UEG4 869 aaPredicted RBP12.29□□□□□ -0.44
VPS18-203ENST00000558855 PRODH2Q9UF12 536 aa12.29□□□□□ -0.44
VPS18-203ENST00000558855 ST6GALNAC2Q9UJ37 374 aa12.29□□□□□ -0.44
VPS18-203ENST00000558855 PSME2Q9UL46 239 aa12.29□□□□□ -0.44
VPS18-203ENST00000558855 CFL2Q9Y281 166 aa12.29□□□□□ -0.44
VPS18-203ENST00000558855 RPH3AQ9Y2J0 694 aaPredicted RBP12.29□□□□□ -0.44
VPS18-203ENST00000558855 MTORP42345 2549 aa12.28□□□□□ -0.44
VPS18-203ENST00000558855 SERTM1A2A2V5 107 aa12.28□□□□□ -0.44
VPS18-203ENST00000558855 CLCA1A8K7I4 914 aa12.28□□□□□ -0.44
VPS18-203ENST00000558855 SCO2O43819 266 aa12.28□□□□□ -0.44
VPS18-203ENST00000558855 PLOD3O60568 738 aa12.28□□□□□ -0.44
VPS18-203ENST00000558855 PSMG1O95456 288 aa12.28□□□□□ -0.44
VPS18-203ENST00000558855 TGM6O95932 706 aa12.28□□□□□ -0.44
VPS18-203ENST00000558855 ACTL6AO96019 429 aa12.28□□□□□ -0.44
VPS18-203ENST00000558855 ENO1P06733 434 aaKnown RBP12.28□□□□□ -0.44
VPS18-203ENST00000558855 TMIGD3P0DMS9 266 aaPredicted RBP12.28□□□□□ -0.44
VPS18-203ENST00000558855 DRD2P14416 443 aa12.28□□□□□ -0.44
VPS18-203ENST00000558855 CPN1P15169 458 aa12.28□□□□□ -0.44
VPS18-203ENST00000558855 GRK2P25098 689 aa12.28□□□□□ -0.44
VPS18-203ENST00000558855 CTSSP25774 331 aa12.28□□□□□ -0.44
VPS18-203ENST00000558855 RIPPLY3P57055 190 aa12.28□□□□□ -0.44
VPS18-203ENST00000558855 DCAF7P61962 342 aa12.28□□□□□ -0.44
VPS18-203ENST00000558855 RPP38P78345 283 aaKnown RBP12.28□□□□□ -0.44
VPS18-203ENST00000558855 C2orf80Q0P641 193 aa12.28□□□□□ -0.44
VPS18-203ENST00000558855 ZNF155Q12901 538 aaPredicted RBP12.28□□□□□ -0.44
VPS18-203ENST00000558855 SNTA1Q13424 505 aa12.28□□□□□ -0.44
VPS18-203ENST00000558855 ZNF385BQ569K4 471 aa12.28□□□□□ -0.44
VPS18-203ENST00000558855 SPIN4Q56A73 249 aa12.28□□□□□ -0.44
VPS18-203ENST00000558855 CLEC6AQ6EIG7 209 aa12.28□□□□□ -0.44
VPS18-203ENST00000558855 ANKRD26P1Q6NSI1 321 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms