RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 TMOD2Q9NZR1 351 aa3.6□□□□□ -1.83
CASC4-206ENST00000558847 RAI14Q9P0K7 980 aa3.6□□□□□ -1.83
CASC4-206ENST00000558847 MBD2Q9UBB5 411 aa3.6□□□□□ -1.83
CASC4-206ENST00000558847 CCDC7Q96M83 1385 aa3.6□□□□□ -1.83
CASC4-206ENST00000558847 KIF26BQ2KJY2 2108 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 MFSD2BA6NFX1 497 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 FOXI3A8MTJ6 420 aaPredicted RBP3.59□□□□□ -1.83
CASC4-206ENST00000558847 C11orf98E9PRG8 122 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 K7ERI5 159 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 MCF2LO15068 1137 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 RANBP6O60518 1105 aaKnown RBP3.59□□□□□ -1.83
CASC4-206ENST00000558847 RHOBTB1O94844 696 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 TOXO94900 526 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 OR4F21O95013 312 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 CSF2P04141 144 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 PCCBP05166 539 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 H2AFZP0C0S5 128 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 GSTT2P0CG29 244 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 GSTT2BP0CG30 244 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 ZCCHC18P0CG32 403 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 KRT13P13646 458 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 OTX2P32243 289 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 RFC2P35250 354 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 SOX6P35712 828 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 PTGFRP43088 359 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 HTR5AP47898 357 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 STK19P49842 368 aaPredicted RBP3.59□□□□□ -1.83
CASC4-206ENST00000558847 ATP4BP51164 291 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 METAP1P53582 386 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 MFAP2P55001 183 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 RAPSNQ13702 412 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 SLC36A3Q495N2 470 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 SLC39A4Q6P5W5 647 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 TMEM184AQ6ZMB5 413 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 LRRC70Q7Z2Q7 622 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 EFCAB13Q8IY85 973 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 ZNRF1Q8ND25 227 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 NFAM1Q8NET5 270 aaPredicted RBP3.59□□□□□ -1.83
CASC4-206ENST00000558847 SSC4DQ8WTU2 575 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 IWS1Q96ST2 819 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 SLC30A2Q9BRI3 323 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 RNF41Q9H4P4 317 aaPredicted RBP3.59□□□□□ -1.83
CASC4-206ENST00000558847 HEXA-AS1Q9H8Q6 139 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 IL1RL2Q9HB29 575 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 FAM114A2Q9NRY5 505 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 DCAF13Q9NV06 445 aaKnown RBP3.59□□□□□ -1.83
CASC4-206ENST00000558847 C1orf123Q9NWV4 160 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 AP4B1Q9Y6B7 739 aa3.59□□□□□ -1.83
CASC4-206ENST00000558847 A0A1B0GTH9 108 aa3.58□□□□□ -1.84
CASC4-206ENST00000558847 TEX48A0A1B0GUV7 120 aa3.58□□□□□ -1.84
CASC4-206ENST00000558847 GSAPA4D1B5 854 aa3.58□□□□□ -1.84
CASC4-206ENST00000558847 EPM2AB3EWF7 344 aa3.58□□□□□ -1.84
CASC4-206ENST00000558847 TYROBPO43914 113 aa3.58□□□□□ -1.84
CASC4-206ENST00000558847 JAK2O60674 1132 aa3.58□□□□□ -1.84
CASC4-206ENST00000558847 TBX19O60806 448 aa3.58□□□□□ -1.84
CASC4-206ENST00000558847 RAMP1O60894 148 aa3.58□□□□□ -1.84
CASC4-206ENST00000558847 OAS1P00973 400 aaKnown RBP3.58□□□□□ -1.84
CASC4-206ENST00000558847 MT-ND1P03886 318 aa3.58□□□□□ -1.84
CASC4-206ENST00000558847 ASNSP08243 561 aa3.58□□□□□ -1.84
CASC4-206ENST00000558847 HCKP08631 526 aa3.58□□□□□ -1.84
CASC4-206ENST00000558847 HOXB7P09629 217 aa3.58□□□□□ -1.84
CASC4-206ENST00000558847 EPB41P11171 864 aaKnown RBP3.58□□□□□ -1.84
CASC4-206ENST00000558847 CYP11B1P15538 503 aa3.58□□□□□ -1.84
CASC4-206ENST00000558847 TSPAN8P19075 237 aa3.58□□□□□ -1.84
CASC4-206ENST00000558847 TRIM23P36406 574 aa3.58□□□□□ -1.84
CASC4-206ENST00000558847 HSD17B7P56937 341 aa3.58□□□□□ -1.84
CASC4-206ENST00000558847 PAX8Q06710 450 aa3.58□□□□□ -1.84
CASC4-206ENST00000558847 ELP6Q0PNE2 266 aa3.58□□□□□ -1.84
CASC4-206ENST00000558847 TRIP10Q15642 601 aa3.58□□□□□ -1.84
CASC4-206ENST00000558847 CDKN3Q16667 212 aa3.58□□□□□ -1.84
CASC4-206ENST00000558847 DCST2Q5T1A1 773 aa3.58□□□□□ -1.84
CASC4-206ENST00000558847 PRR5LQ6MZQ0 368 aa3.58□□□□□ -1.84
CASC4-206ENST00000558847 CBLN3Q6UW01 205 aa3.58□□□□□ -1.84
CASC4-206ENST00000558847 PPP1R42Q7Z4L9 355 aa3.58□□□□□ -1.84
CASC4-206ENST00000558847 ZNF540Q8NDQ6 660 aa3.58□□□□□ -1.84
CASC4-206ENST00000558847 FLVCR1-AS1Q8TAF5 88 aa3.58□□□□□ -1.84
CASC4-206ENST00000558847 TADA1Q96BN2 335 aa3.58□□□□□ -1.84
CASC4-206ENST00000558847 ZNF689Q96CS4 500 aaPredicted RBP3.58□□□□□ -1.84
CASC4-206ENST00000558847 DTNBP1Q96EV8 351 aa3.58□□□□□ -1.84
CASC4-206ENST00000558847 C18orf12Q96KH6 178 aa3.58□□□□□ -1.84
CASC4-206ENST00000558847 NFKBIZQ9BYH8 718 aa3.58□□□□□ -1.84
CASC4-206ENST00000558847 ESM1Q9NQ30 184 aa3.58□□□□□ -1.84
CASC4-206ENST00000558847 CGNQ9P2M7 1197 aaKnown RBP3.58□□□□□ -1.84
CASC4-206ENST00000558847 MLXQ9UH92 298 aa3.58□□□□□ -1.84
CASC4-206ENST00000558847 EXOSC1Q9Y3B2 195 aaKnown RBP3.58□□□□□ -1.84
CASC4-206ENST00000558847 IGHV3-16A0A0C4DH30 117 aa3.57□□□□□ -1.84
CASC4-206ENST00000558847 LRRC30A6NM36 301 aa3.57□□□□□ -1.84
CASC4-206ENST00000558847 A8MUI8 341 aa3.57□□□□□ -1.84
CASC4-206ENST00000558847 H3BMH7 237 aa3.57□□□□□ -1.84
CASC4-206ENST00000558847 LANCL1O43813 399 aa3.57□□□□□ -1.84
CASC4-206ENST00000558847 SDC3O75056 442 aa3.57□□□□□ -1.84
CASC4-206ENST00000558847 SF3B1O75533 1304 aaKnown RBP eCLIP3.57□□□□□ -1.848e-6■■■■■ 107
CASC4-206ENST00000558847 BCKDHAP12694 445 aa3.57□□□□□ -1.84
CASC4-206ENST00000558847 BRCC3P46736 316 aa3.57□□□□□ -1.84
CASC4-206ENST00000558847 ACADVLP49748 655 aa3.57□□□□□ -1.84
CASC4-206ENST00000558847 VEGFCP49767 419 aa3.57□□□□□ -1.84
CASC4-206ENST00000558847 ARHGDIAP52565 204 aa3.57□□□□□ -1.84
CASC4-206ENST00000558847 ZNF85Q03923 595 aa3.57□□□□□ -1.84
CASC4-206ENST00000558847 ZKSCAN8Q15776 578 aaPredicted RBP3.57□□□□□ -1.84
CASC4-206ENST00000558847 PCK2Q16822 640 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms