RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 GIN1Q9NXP7 522 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 SPACA6W5XKT8 324 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 FAM186AA6NE01 2351 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 A0A0G2JPF8 293 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 TMEM247A6NEH6 219 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 HNRNPCL2B2RXH8 293 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 HNRNPCL3B7ZW38 293 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 AGRPO00253 132 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 PCDH17O14917 1159 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 HYAL3O43820 417 aaPredicted RBP12.09□□□□□ -0.47
SMAD3-207ENST00000558763 OR6B1O95007 311 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 ZBTB11O95625 1053 aaPredicted RBP12.09□□□□□ -0.47
SMAD3-207ENST00000558763 HNRNPCL4P0DMR1 293 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 IL7RP16871 459 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 ALDH3B2P48448 385 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 ANXA11P50995 505 aaKnown RBP12.09□□□□□ -0.47
SMAD3-207ENST00000558763 IGLV3-21P80748 117 aaPredicted RBP12.09□□□□□ -0.47
SMAD3-207ENST00000558763 CHRNEQ04844 493 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 DUSP5Q16690 384 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 MICAQ29983 383 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 FAM214AQ32MH5 1076 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 NADK2Q4G0N4 442 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 WDR74Q6RFH5 385 aaPredicted RBP12.09□□□□□ -0.47
SMAD3-207ENST00000558763 FRRS1Q6ZNA5 592 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 C8orf59Q8N0T1 100 aaPredicted RBP12.09□□□□□ -0.47
SMAD3-207ENST00000558763 TTC29Q8NA56 475 aaPredicted RBP12.09□□□□□ -0.47
SMAD3-207ENST00000558763 OR10G2Q8NGC3 310 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 GIPC3Q8TF64 312 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 RASSF5Q8WWW0 418 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 HOXB13Q92826 284 aaPredicted RBP12.09□□□□□ -0.47
SMAD3-207ENST00000558763 FEVQ99581 238 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 PITX2Q99697 317 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 RBCK1Q9BYM8 510 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 FAM192AQ9GZU8 254 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 SPRTNQ9H040 489 aaPredicted RBP12.09□□□□□ -0.47
SMAD3-207ENST00000558763 PDE7BQ9NP56 450 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 SOHLH2Q9NX45 425 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 HCN3Q9P1Z3 774 aa12.09□□□□□ -0.47
SMAD3-207ENST00000558763 NDRG4Q9ULP0 352 aaKnown RBP12.09□□□□□ -0.47
SMAD3-207ENST00000558763 HYKKA2RU49 373 aa12.08□□□□□ -0.48
SMAD3-207ENST00000558763 A8MVJ9 347 aa12.08□□□□□ -0.48
SMAD3-207ENST00000558763 M0R3H8 397 aa12.08□□□□□ -0.48
SMAD3-207ENST00000558763 BCKDKO14874 412 aa12.08□□□□□ -0.48
SMAD3-207ENST00000558763 FCMRO60667 390 aa12.08□□□□□ -0.48
SMAD3-207ENST00000558763 SERPINB7O75635 380 aa12.08□□□□□ -0.48
SMAD3-207ENST00000558763 CBX7O95931 251 aa12.08□□□□□ -0.48
SMAD3-207ENST00000558763 LGI1O95970 557 aa12.08□□□□□ -0.48
SMAD3-207ENST00000558763 CYP4B1P13584 511 aa12.08□□□□□ -0.48
SMAD3-207ENST00000558763 S1PR1P21453 382 aa12.08□□□□□ -0.48
SMAD3-207ENST00000558763 SEPHS1P49903 392 aa12.08□□□□□ -0.48
SMAD3-207ENST00000558763 PDX1P52945 283 aa12.08□□□□□ -0.48
SMAD3-207ENST00000558763 TUBA4AP68366 448 aa12.08□□□□□ -0.48
SMAD3-207ENST00000558763 MAT1AQ00266 395 aaKnown RBP12.08□□□□□ -0.48
SMAD3-207ENST00000558763 NPTX1Q15818 432 aa12.08□□□□□ -0.48
SMAD3-207ENST00000558763 SYT16Q17RD7 645 aa12.08□□□□□ -0.48
SMAD3-207ENST00000558763 GARNL3Q5VVW2 1013 aa12.08□□□□□ -0.48
SMAD3-207ENST00000558763 ATG16L2Q8NAA4 619 aa12.08□□□□□ -0.48
SMAD3-207ENST00000558763 ZNF555Q8NEP9 628 aa12.08□□□□□ -0.48
SMAD3-207ENST00000558763 DEFB124Q8NES8 71 aa12.08□□□□□ -0.48
SMAD3-207ENST00000558763 OR9Q2Q8NGE9 314 aa12.08□□□□□ -0.48
SMAD3-207ENST00000558763 ADAMTS16Q8TE57 1224 aa12.08□□□□□ -0.48
SMAD3-207ENST00000558763 PROX1Q92786 737 aa12.08□□□□□ -0.48
SMAD3-207ENST00000558763 CDS1Q92903 461 aa12.08□□□□□ -0.48
SMAD3-207ENST00000558763 GFM1Q96RP9 751 aaKnown RBP12.08□□□□□ -0.48
SMAD3-207ENST00000558763 CDC6Q99741 560 aa12.08□□□□□ -0.48
SMAD3-207ENST00000558763 RIBC2Q9H4K1 309 aa12.08□□□□□ -0.48
SMAD3-207ENST00000558763 KRT84Q9NSB2 600 aa12.08□□□□□ -0.48
SMAD3-207ENST00000558763 RHCGQ9UBD6 479 aa12.08□□□□□ -0.48
SMAD3-207ENST00000558763 A4GNTQ9UNA3 340 aa12.08□□□□□ -0.48
SMAD3-207ENST00000558763 LIPT1Q9Y234 373 aa12.08□□□□□ -0.48
SMAD3-207ENST00000558763 TRBV4-1A0A0J9YWV2 114 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 ARRDC5A6NEK1 342 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 GFRA3O60609 400 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 SLITRK5O94991 958 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 GP1BAP07359 652 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 SLC35E2P0CK97 266 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 RNH1P13489 461 aaKnown RBP12.07□□□□□ -0.48
SMAD3-207ENST00000558763 CBLP22681 906 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 RYKP34925 604 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 NR1H2P55055 460 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 IL18R1Q13478 541 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 KEAP1Q14145 624 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 MEP1AQ16819 746 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 GPAT3Q53EU6 434 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 NUP210LQ5VU65 1888 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 ZNF574Q6ZN55 896 aaPredicted RBP12.07□□□□□ -0.48
SMAD3-207ENST00000558763 KRT73Q86Y46 540 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 CARFQ8N187 725 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 RCBTB1Q8NDN9 531 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 OR6T1Q8NGN1 323 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 VANGL1Q8TAA9 524 aaPredicted RBP12.07□□□□□ -0.48
SMAD3-207ENST00000558763 PHF10Q8WUB8 498 aaKnown RBP12.07□□□□□ -0.48
SMAD3-207ENST00000558763 SGCDQ92629 289 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 NIPSNAP1Q9BPW8 284 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 YTHDF1Q9BYJ9 559 aaKnown RBP12.07□□□□□ -0.48
SMAD3-207ENST00000558763 NMNAT1Q9HAN9 279 aaPredicted RBP12.07□□□□□ -0.48
SMAD3-207ENST00000558763 VGLL3A8MV65 326 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 D6RAR5 112 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 GADD45GO95257 159 aa12.07□□□□□ -0.48
SMAD3-207ENST00000558763 BMP10O95393 424 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms