RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 GPIP06744 558 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 CA3P07451 260 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 SDC1P18827 310 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 ITPKAP23677 461 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 ACVR2AP27037 513 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 ID4P47928 161 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 APOFQ13790 326 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 VEZF1Q14119 521 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 FAM78AQ5JUQ0 283 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 C9orf64Q5T6V5 341 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 AGAP7PQ5VUJ5 663 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 FAM92BQ6ZTR7 304 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 SLC16A13Q7RTY0 426 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 PRSS42Q7Z5A4 293 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 NPAS3Q8IXF0 933 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 RIMKLAQ8IXN7 391 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 ZNF548Q8NEK5 533 aaPredicted RBP4.82□□□□□ -1.64
TMEM260-210ENST00000556422 OR8J3Q8NGG0 315 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 OR6Q1Q8NGQ2 317 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 WDR48Q8TAF3 677 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 WDR20Q8TBZ3 569 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 SKA2Q8WVK7 121 aaPredicted RBP4.82□□□□□ -1.64
TMEM260-210ENST00000556422 PPWD1Q96BP3 646 aaKnown RBP4.82□□□□□ -1.64
TMEM260-210ENST00000556422 FCRL1Q96LA6 429 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 COQ10AQ96MF6 247 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 TEFMQ96QE5 360 aaKnown RBP4.82□□□□□ -1.64
TMEM260-210ENST00000556422 DMRTA2Q96SC8 542 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 WRAP53Q9BUR4 548 aaKnown RBP4.82□□□□□ -1.64
TMEM260-210ENST00000556422 MUC13Q9H3R2 512 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 ZNF696Q9H7X3 374 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 FOLH1BQ9HBA9 442 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 OAZ3Q9UMX2 235 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 ABCG2Q9UNQ0 655 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 PCDHB11Q9Y5F2 797 aa4.82□□□□□ -1.64
TMEM260-210ENST00000556422 PCYT1BQ9Y5K3 369 aaPredicted RBP4.82□□□□□ -1.64
TMEM260-210ENST00000556422 CCDC88CQ9P219 2028 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 E7EQ34 232 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 LOC110117498-PIK3R3F6TDL0 507 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 ERVH48-1M5A8F1 160 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 DVL2O14641 736 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 HCRTR2O43614 444 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 ERCC1P07992 297 aaPredicted RBP4.81□□□□□ -1.64
TMEM260-210ENST00000556422 ELFN1P0C7U0 828 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 GGT1P19440 569 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 FCARP24071 287 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 ACADLP28330 430 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 GZMMP51124 257 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 TMEM115Q12893 351 aaPredicted RBP4.81□□□□□ -1.64
TMEM260-210ENST00000556422 IL18R1Q13478 541 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 CDK10Q15131 360 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 ADIPOQQ15848 244 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 ATP6AP1Q15904 470 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 NKG7Q16617 165 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 C2orf27AQ580R0 203 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 TEX30Q5JUR7 227 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 ACER2Q5QJU3 275 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 ANKRD26P1Q6NSI1 321 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 CBR4Q8N4T8 237 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 ACBD4Q8NC06 268 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 OR9A2Q8NGT5 310 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 MAGEE2Q8TD90 523 aaPredicted RBP4.81□□□□□ -1.64
TMEM260-210ENST00000556422 BPIFB1Q8TDL5 484 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 SELENOMQ8WWX9 145 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 TFAP2CQ92754 450 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 CCDC74AQ96AQ1 378 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 ARRDC3Q96B67 414 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 BIRC7Q96CA5 298 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 DTD2Q96FN9 168 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 CCDC115Q96NT0 180 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 C7orf50Q9BRJ6 194 aaKnown RBP4.81□□□□□ -1.64
TMEM260-210ENST00000556422 ANKRD60Q9BZ19 345 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 OR51M1Q9H341 326 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 ELOVL6Q9H5J4 265 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 DUSP22Q9NRW4 184 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 FAM120CQ9NX05 1096 aaKnown RBP4.81□□□□□ -1.64
TMEM260-210ENST00000556422 ZNF639Q9UID6 485 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 ZFR2Q9UPR6 939 aaKnown RBP4.81□□□□□ -1.64
TMEM260-210ENST00000556422 WASF3Q9UPY6 502 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 EXOGQ9Y2C4 368 aaKnown RBP4.81□□□□□ -1.64
TMEM260-210ENST00000556422 HEMK1Q9Y5R4 338 aaPredicted RBP4.81□□□□□ -1.64
TMEM260-210ENST00000556422 BRWD1Q9NSI6 2320 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 SAC3D1A6NKF1 404 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 PPM1DO15297 605 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 PRKD3O94806 890 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 PRSS23O95084 383 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 ETHE1O95571 254 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 SLC16A8O95907 504 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 AK1P00568 194 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 TMIGD3P0DMS9 266 aaPredicted RBP4.81□□□□□ -1.64
TMEM260-210ENST00000556422 AMD1P17707 334 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 IMPA1P29218 277 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 GPX4P36969 197 aaPredicted RBP4.81□□□□□ -1.64
TMEM260-210ENST00000556422 MAGEB1P43366 347 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 CLDN8P56748 225 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 POU4F2Q12837 409 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 MAD2L1Q13257 205 aaPredicted RBP4.81□□□□□ -1.64
TMEM260-210ENST00000556422 RNF151Q2KHN1 245 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 LRIF1Q5T3J3 769 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 CCNJQ5T5M9 372 aa4.81□□□□□ -1.64
TMEM260-210ENST00000556422 FRG2Q64ET8 278 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms