RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 ABRAXAS1Q6UWZ7 409 aa4.08□□□□□ -1.76
SYNE2-210ENST00000553455 HACD2Q6Y1H2 254 aa4.08□□□□□ -1.76
SYNE2-210ENST00000553455 STXBP4Q6ZWJ1 553 aa4.08□□□□□ -1.76
SYNE2-210ENST00000553455 VPS36Q86VN1 386 aa4.08□□□□□ -1.76
SYNE2-210ENST00000553455 BEST4Q8NFU0 473 aa4.08□□□□□ -1.76
SYNE2-210ENST00000553455 OR52J3Q8NH60 311 aa4.08□□□□□ -1.76
SYNE2-210ENST00000553455 ITLN1Q8WWA0 313 aa4.08□□□□□ -1.76
SYNE2-210ENST00000553455 CRYGNQ8WXF5 182 aa4.08□□□□□ -1.76
SYNE2-210ENST00000553455 C11orf24Q96F05 449 aaPredicted RBP4.08□□□□□ -1.76
SYNE2-210ENST00000553455 WBP1Q96G27 269 aa4.08□□□□□ -1.76
SYNE2-210ENST00000553455 MRPL13Q9BYD1 178 aaKnown RBP4.08□□□□□ -1.76
SYNE2-210ENST00000553455 ABCC13Q9NSE7 274 aa4.08□□□□□ -1.76
SYNE2-210ENST00000553455 RNF24Q9Y225 148 aa4.08□□□□□ -1.76
SYNE2-210ENST00000553455 IGHV3OR16-12A0A075B7B8 117 aa4.07□□□□□ -1.76
SYNE2-210ENST00000553455 MFSD2BA6NFX1 497 aa4.07□□□□□ -1.76
SYNE2-210ENST00000553455 NPIPA2E9PIF3 369 aa4.07□□□□□ -1.76
SYNE2-210ENST00000553455 CAPN2P17655 700 aa4.07□□□□□ -1.76
SYNE2-210ENST00000553455 DPP4P27487 766 aa4.07□□□□□ -1.76
SYNE2-210ENST00000553455 KLHL30Q0D2K2 578 aa4.07□□□□□ -1.76
SYNE2-210ENST00000553455 BNIP1Q12981 228 aa4.07□□□□□ -1.76
SYNE2-210ENST00000553455 HSP90AA5PQ58FG0 334 aa4.07□□□□□ -1.76
SYNE2-210ENST00000553455 PRR5LQ6MZQ0 368 aa4.07□□□□□ -1.76
SYNE2-210ENST00000553455 AFTPHQ6ULP2 937 aa4.07□□□□□ -1.76
SYNE2-210ENST00000553455 TSEN54Q7Z6J9 526 aaKnown RBP4.07□□□□□ -1.76
SYNE2-210ENST00000553455 LHFPL4Q7Z7J7 247 aa4.07□□□□□ -1.76
SYNE2-210ENST00000553455 SLC25A42Q86VD7 318 aa4.07□□□□□ -1.76
SYNE2-210ENST00000553455 GCNT2Q8N0V5 402 aa4.07□□□□□ -1.76
SYNE2-210ENST00000553455 FNDC8Q8TC99 324 aa4.07□□□□□ -1.76
SYNE2-210ENST00000553455 RASL10AQ92737 203 aa4.07□□□□□ -1.76
SYNE2-210ENST00000553455 RPAP3Q9H6T3 665 aaPredicted RBP4.07□□□□□ -1.76
SYNE2-210ENST00000553455 AMBNQ9NP70 447 aa4.07□□□□□ -1.76
SYNE2-210ENST00000553455 SLC35D1Q9NTN3 355 aa4.07□□□□□ -1.76
SYNE2-210ENST00000553455 DCAF13Q9NV06 445 aaKnown RBP4.07□□□□□ -1.76
SYNE2-210ENST00000553455 GHRLQ9UBU3 117 aa4.07□□□□□ -1.76
SYNE2-210ENST00000553455 ATP6V1HQ9UI12 483 aa4.07□□□□□ -1.76
SYNE2-210ENST00000553455 B9D1Q9UPM9 204 aa4.07□□□□□ -1.76
SYNE2-210ENST00000553455 AP1M2Q9Y6Q5 423 aa4.07□□□□□ -1.76
SYNE2-210ENST00000553455 LRRC30A6NM36 301 aa4.06□□□□□ -1.76
SYNE2-210ENST00000553455 SDHDO14521 159 aa4.06□□□□□ -1.76
SYNE2-210ENST00000553455 TYROBPO43914 113 aa4.06□□□□□ -1.76
SYNE2-210ENST00000553455 GALR3O60755 368 aaPredicted RBP4.06□□□□□ -1.76
SYNE2-210ENST00000553455 CRLF1O75462 422 aa4.06□□□□□ -1.76
SYNE2-210ENST00000553455 OR4F21O95013 312 aa4.06□□□□□ -1.76
SYNE2-210ENST00000553455 NUDT14O95848 222 aa4.06□□□□□ -1.76
SYNE2-210ENST00000553455 SERPINB2P05120 415 aa4.06□□□□□ -1.76
SYNE2-210ENST00000553455 FOLR2P14207 255 aa4.06□□□□□ -1.76
SYNE2-210ENST00000553455 TRA2BP62995 288 aaKnown RBP4.06□□□□□ -1.76
SYNE2-210ENST00000553455 TFDP1Q14186 410 aa4.06□□□□□ -1.76
SYNE2-210ENST00000553455 MS4A13Q5J8X5 152 aa4.06□□□□□ -1.76
SYNE2-210ENST00000553455 BEND6Q5SZJ8 279 aaPredicted RBP4.06□□□□□ -1.76
SYNE2-210ENST00000553455 RIPPLY2Q5TAB7 128 aa4.06□□□□□ -1.76
SYNE2-210ENST00000553455 LPCAT2Q7L5N7 544 aa4.06□□□□□ -1.76
SYNE2-210ENST00000553455 FGFRL1Q8N441 504 aa4.06□□□□□ -1.76
SYNE2-210ENST00000553455 POM121L12Q8N7R1 296 aa4.06□□□□□ -1.76
SYNE2-210ENST00000553455 ZNF485Q8NCK3 441 aa4.06□□□□□ -1.76
SYNE2-210ENST00000553455 OR6T1Q8NGN1 323 aa4.06□□□□□ -1.76
SYNE2-210ENST00000553455 SYAP1Q96A49 352 aaPredicted RBP4.06□□□□□ -1.76
SYNE2-210ENST00000553455 VSTM2LQ96N03 204 aa4.06□□□□□ -1.76
SYNE2-210ENST00000553455 THUMPD2Q9BTF0 503 aaKnown RBP4.06□□□□□ -1.76
SYNE2-210ENST00000553455 CARD6Q9BX69 1037 aa4.06□□□□□ -1.76
SYNE2-210ENST00000553455 TRIM9Q9C026 710 aa4.06□□□□□ -1.76
SYNE2-210ENST00000553455 GPN2Q9H9Y4 310 aaPredicted RBP4.06□□□□□ -1.76
SYNE2-210ENST00000553455 CALHM2Q9HA72 323 aa4.06□□□□□ -1.76
SYNE2-210ENST00000553455 AGPAT5Q9NUQ2 364 aa4.06□□□□□ -1.76
SYNE2-210ENST00000553455 KLRF1Q9NZS2 232 aa4.06□□□□□ -1.76
SYNE2-210ENST00000553455 SH3BGRL2Q9UJC5 107 aa4.06□□□□□ -1.76
SYNE2-210ENST00000553455 BLOC1S6Q9UL45 172 aa4.06□□□□□ -1.76
SYNE2-210ENST00000553455 DHRS7Q9Y394 339 aa4.06□□□□□ -1.76
SYNE2-210ENST00000553455 MFHAS1Q9Y4C4 1052 aa4.06□□□□□ -1.76
SYNE2-210ENST00000553455 ZNF487B1APH4 448 aa4.05□□□□□ -1.76
SYNE2-210ENST00000553455 PHF1O43189 567 aaPredicted RBP4.05□□□□□ -1.76
SYNE2-210ENST00000553455 IGFBP5P24593 272 aa4.05□□□□□ -1.76
SYNE2-210ENST00000553455 SHC1P29353 583 aa4.05□□□□□ -1.76
SYNE2-210ENST00000553455 CYLC1P35663 651 aaPredicted RBP4.05□□□□□ -1.76
SYNE2-210ENST00000553455 STK19P49842 368 aaPredicted RBP4.05□□□□□ -1.76
SYNE2-210ENST00000553455 ARHGDIAP52565 204 aa4.05□□□□□ -1.76
SYNE2-210ENST00000553455 HSD17B7P56937 341 aa4.05□□□□□ -1.76
SYNE2-210ENST00000553455 COX10Q12887 443 aa4.05□□□□□ -1.76
SYNE2-210ENST00000553455 EIF2B1Q14232 305 aaKnown RBP4.05□□□□□ -1.76
SYNE2-210ENST00000553455 ABRAXAS2Q15018 415 aa4.05□□□□□ -1.76
SYNE2-210ENST00000553455 TRIP10Q15642 601 aa4.05□□□□□ -1.76
SYNE2-210ENST00000553455 TMEM41BQ5BJD5 291 aa4.05□□□□□ -1.76
SYNE2-210ENST00000553455 NIPAL3Q6P499 406 aa4.05□□□□□ -1.76
SYNE2-210ENST00000553455 CCBE1Q6UXH8 406 aaPredicted RBP4.05□□□□□ -1.76
SYNE2-210ENST00000553455 Q7L0L9 218 aa4.05□□□□□ -1.76
SYNE2-210ENST00000553455 ZNF573Q86YE8 665 aa4.05□□□□□ -1.76
SYNE2-210ENST00000553455 CBWD2Q8IUF1 395 aa4.05□□□□□ -1.76
SYNE2-210ENST00000553455 GRAMD2AQ8IUY3 354 aa4.05□□□□□ -1.76
SYNE2-210ENST00000553455 EFCAB13Q8IY85 973 aa4.05□□□□□ -1.76
SYNE2-210ENST00000553455 ARL14Q8N4G2 192 aa4.05□□□□□ -1.76
SYNE2-210ENST00000553455 SPATA3Q8NHX4 192 aa4.05□□□□□ -1.76
SYNE2-210ENST00000553455 GIPC3Q8TF64 312 aa4.05□□□□□ -1.76
SYNE2-210ENST00000553455 PINX1Q96BK5 328 aaKnown RBP4.05□□□□□ -1.76
SYNE2-210ENST00000553455 DTNBP1Q96EV8 351 aa4.05□□□□□ -1.76
SYNE2-210ENST00000553455 DNAJA3Q96EY1 480 aa4.05□□□□□ -1.76
SYNE2-210ENST00000553455 PIWIL1Q96J94 861 aaKnown RBP4.05□□□□□ -1.76
SYNE2-210ENST00000553455 RPP25Q9BUL9 199 aaKnown RBP4.05□□□□□ -1.76
SYNE2-210ENST00000553455 C1orf123Q9NWV4 160 aa4.05□□□□□ -1.76
SYNE2-210ENST00000553455 DUS2Q9NX74 493 aaKnown RBP4.05□□□□□ -1.76
SYNE2-210ENST00000553455 EXOSC1Q9Y3B2 195 aaKnown RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms