RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 KHDRBS3O75525 346 aaKnown RBP4.96□□□□□ -1.62
SCFD1-208ENST00000553278 CEACAM4O75871 244 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 IGSF6O95976 241 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 AGTP01019 485 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 IGHEP01854 428 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 OPN1LWP04000 364 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 PRSS1P07477 247 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 GZMAP12544 262 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 H2AFXP16104 143 aaPredicted RBP4.96□□□□□ -1.62
SCFD1-208ENST00000553278 MX1P20591 662 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 SPSB3Q6PJ21 355 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 DOK6Q6PKX4 331 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 ATRAIDQ6UW56 229 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 TRPM8Q7Z2W7 1104 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 ANKRD37Q7Z713 158 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 KIAA1328Q86T90 577 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 ACOT1Q86TX2 421 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 SLC38A6Q8IZM9 456 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 LRRC43Q8N309 656 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 SPEM1Q8N4L4 309 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 OR4F17Q8NGA8 305 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 OR9K2Q8NGE7 335 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 OR1K1Q8NGR3 316 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 OR4F5Q8NH21 305 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 ART4Q93070 314 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 LHX4Q969G2 390 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 SH3YL1Q96HL8 342 aaPredicted RBP4.96□□□□□ -1.62
SCFD1-208ENST00000553278 C7orf34Q96L11 122 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 RPRD1AQ96P16 312 aaPredicted RBP4.96□□□□□ -1.62
SCFD1-208ENST00000553278 OR4F4Q96R69 305 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 SLC30A2Q9BRI3 323 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 TRIM9Q9C026 710 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 SLC25A51Q9H1U9 297 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 RHOJQ9H4E5 214 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 GPN2Q9H9Y4 310 aaPredicted RBP4.96□□□□□ -1.62
SCFD1-208ENST00000553278 ZFP57Q9NU63 452 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 NLGN3Q9NZ94 848 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 TCF19Q9Y242 345 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 WDR19Q8NEZ3 1342 aa4.96□□□□□ -1.62
SCFD1-208ENST00000553278 KIAA1210Q9ULL0 1709 aa4.95□□□□□ -1.62
SCFD1-208ENST00000553278 A0A075B6Q4 140 aa4.95□□□□□ -1.62
SCFD1-208ENST00000553278 H0YIV9 168 aa4.95□□□□□ -1.62
SCFD1-208ENST00000553278 BTN3A3O00478 584 aa4.95□□□□□ -1.62
SCFD1-208ENST00000553278 CACNG3O60359 315 aa4.95□□□□□ -1.62
SCFD1-208ENST00000553278 RANBP6O60518 1105 aaKnown RBP4.95□□□□□ -1.62
SCFD1-208ENST00000553278 FGF3P11487 239 aaPredicted RBP4.95□□□□□ -1.62
SCFD1-208ENST00000553278 CCDC130P13994 396 aa4.95□□□□□ -1.62
SCFD1-208ENST00000553278 FCGR2CP31995 323 aa4.95□□□□□ -1.62
SCFD1-208ENST00000553278 MAGEA5P43359 124 aa4.95□□□□□ -1.62
SCFD1-208ENST00000553278 CRYBA2P53672 197 aa4.95□□□□□ -1.62
SCFD1-208ENST00000553278 KRTAP1-1Q07627 177 aa4.95□□□□□ -1.62
SCFD1-208ENST00000553278 SRSF5Q13243 272 aaKnown RBP4.95□□□□□ -1.62
SCFD1-208ENST00000553278 ELAVL3Q14576 367 aaKnown RBP4.95□□□□□ -1.62
SCFD1-208ENST00000553278 CELF3Q5SZQ8 465 aaKnown RBP4.95□□□□□ -1.62
SCFD1-208ENST00000553278 PRAMEF5Q5TYX0 476 aa4.95□□□□□ -1.62
SCFD1-208ENST00000553278 PRAMEF6Q5VXH4 476 aa4.95□□□□□ -1.62
SCFD1-208ENST00000553278 PNCKQ6P2M8 343 aa4.95□□□□□ -1.62
SCFD1-208ENST00000553278 SCYL2Q6P3W7 929 aa4.95□□□□□ -1.62
SCFD1-208ENST00000553278 NLRP9Q7RTR0 991 aa4.95□□□□□ -1.62
SCFD1-208ENST00000553278 PTAR1Q7Z6K3 402 aaPredicted RBP4.95□□□□□ -1.62
SCFD1-208ENST00000553278 TMEM123Q8N131 208 aa4.95□□□□□ -1.62
SCFD1-208ENST00000553278 CLDN19Q8N6F1 224 aa4.95□□□□□ -1.62
SCFD1-208ENST00000553278 BBOF1Q8ND07 529 aa4.95□□□□□ -1.62
SCFD1-208ENST00000553278 STXBP6Q8NFX7 210 aa4.95□□□□□ -1.62
SCFD1-208ENST00000553278 FAM3CQ92520 227 aa4.95□□□□□ -1.62
SCFD1-208ENST00000553278 SLCO2A1Q92959 643 aa4.95□□□□□ -1.62
SCFD1-208ENST00000553278 TADA1Q96BN2 335 aa4.95□□□□□ -1.62
SCFD1-208ENST00000553278 ALKBH3Q96Q83 286 aaPredicted RBP4.95□□□□□ -1.62
SCFD1-208ENST00000553278 CCNL2Q96S94 520 aaPredicted RBP4.95□□□□□ -1.62
SCFD1-208ENST00000553278 C19orf43Q9BQ61 176 aa4.95□□□□□ -1.62
SCFD1-208ENST00000553278 FEM1AQ9BSK4 669 aa4.95□□□□□ -1.62
SCFD1-208ENST00000553278 COMMD4Q9H0A8 199 aa4.95□□□□□ -1.62
SCFD1-208ENST00000553278 IL1RL2Q9HB29 575 aa4.95□□□□□ -1.62
SCFD1-208ENST00000553278 CRLF2Q9HC73 371 aa4.95□□□□□ -1.62
SCFD1-208ENST00000553278 RAB18Q9NP72 206 aa4.95□□□□□ -1.62
SCFD1-208ENST00000553278 SPATA7Q9P0W8 599 aa4.95□□□□□ -1.62
SCFD1-208ENST00000553278 SUN2Q9UH99 717 aa4.95□□□□□ -1.62
SCFD1-208ENST00000553278 PIGLQ9Y2B2 252 aa4.95□□□□□ -1.62
SCFD1-208ENST00000553278 MAD1L1Q9Y6D9 718 aa4.95□□□□□ -1.62
SCFD1-208ENST00000553278 A0A1W2PNV4 684 aa4.94□□□□□ -1.62
SCFD1-208ENST00000553278 FAM74A7A6NL05 159 aa4.94□□□□□ -1.62
SCFD1-208ENST00000553278 C15orf61A6NNL5 157 aa4.94□□□□□ -1.62
SCFD1-208ENST00000553278 N4BP1O75113 896 aaKnown RBP4.94□□□□□ -1.62
SCFD1-208ENST00000553278 STX11O75558 287 aa4.94□□□□□ -1.62
SCFD1-208ENST00000553278 NDUFB10O96000 172 aa4.94□□□□□ -1.62
SCFD1-208ENST00000553278 TBXA2RP21731 343 aa4.94□□□□□ -1.62
SCFD1-208ENST00000553278 PCMT1P22061 227 aa4.94□□□□□ -1.62
SCFD1-208ENST00000553278 EDNRAP25101 427 aa4.94□□□□□ -1.62
SCFD1-208ENST00000553278 LAP3P28838 519 aa4.94□□□□□ -1.62
SCFD1-208ENST00000553278 SSR1P43307 286 aaKnown RBP4.94□□□□□ -1.62
SCFD1-208ENST00000553278 FNTAP49354 379 aa4.94□□□□□ -1.62
SCFD1-208ENST00000553278 CDH4P55283 916 aa4.94□□□□□ -1.62
SCFD1-208ENST00000553278 PRMT2P55345 433 aa4.94□□□□□ -1.62
SCFD1-208ENST00000553278 PEX3P56589 373 aa4.94□□□□□ -1.62
SCFD1-208ENST00000553278 LINC00205P59089 165 aa4.94□□□□□ -1.62
SCFD1-208ENST00000553278 RPS8P62241 208 aaKnown RBP4.94□□□□□ -1.62
SCFD1-208ENST00000553278 NTHL1P78549 312 aa4.94□□□□□ -1.62
SCFD1-208ENST00000553278 DHODHQ02127 395 aa4.94□□□□□ -1.62
SCFD1-208ENST00000553278 BST1Q10588 318 aa4.94□□□□□ -1.62
SCFD1-208ENST00000553278 HNRNPDQ14103 355 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms