RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 H3BMQ9 156 aa8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 TMX2-CTNND1H3BSU7 103 aa8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 RGS10O43665 173 aa8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 PIAS2O75928 621 aa8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 INMTO95050 263 aa8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 MED26O95402 600 aa8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 ADAP00813 363 aa8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 MT-ND2P03891 347 aa8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 NR4A1P22736 598 aa8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 SOX18P35713 384 aa8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 SEPHS1P49903 392 aa8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 AFF3P51826 1226 aaKnown RBP8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 SH3BGRP55822 239 aaPredicted RBP8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 RGS8P57771 180 aaPredicted RBP8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 SMIM11AP58511 58 aa8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 CDC42P60953 191 aa8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 EMX1Q04741 257 aaPredicted RBP8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 DGCR6Q14129 220 aa8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 KCNAB1Q14722 419 aa8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 C14orf28Q4W4Y0 310 aa8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 ZNF770Q6IQ21 691 aaPredicted RBP8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 SLC36A4Q6YBV0 504 aa8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 FRRS1Q6ZNA5 592 aa8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 CCDC103Q8IW40 242 aa8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 PARP8Q8N3A8 854 aa8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 DEFB123Q8N688 67 aa8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 COX18Q8N8Q8 333 aa8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 C1orf216Q8TAB5 229 aa8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 GPR151Q8TDV0 419 aa8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 MMABQ96EY8 250 aaPredicted RBP8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 PRRC1Q96M27 445 aa8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 COG8Q96MW5 612 aa8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 TUBA1CQ9BQE3 449 aa8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 TRIM45Q9H8W5 580 aaPredicted RBP8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 KLHL28Q9NXS3 571 aa8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 MAT2BQ9NZL9 334 aa8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 LRIT1Q9P2V4 623 aa8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 ACAD8Q9UKU7 415 aa8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 SLC6A14Q9UN76 642 aa8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 C19orf53Q9UNZ5 99 aaPredicted RBP8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 HEMK1Q9Y5R4 338 aaPredicted RBP8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 DSPPQ9NZW4 1301 aa8.49□□□□□ -1.05
RAB3IP-218ENST00000553099 NPIPA5A0A0B4J1W7 369 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 ARRDC5A6NEK1 342 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 NPIPA7E9PJI5 369 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 SRPX2O60687 465 aaPredicted RBP8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 IGFBP1P08833 259 aaPredicted RBP8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 ALOX5P09917 674 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 NPIPA8P0DM63 369 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 MYF5P13349 255 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 PTNP21246 168 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 DCKP27707 260 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 CRISP1P54107 249 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 CXCR4P61073 352 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 SKP1P63208 163 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 LSM11P83369 360 aaKnown RBP eCLIP8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 STX4Q12846 297 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 ZNF155Q12901 538 aaPredicted RBP8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 BNIP3Q12983 259 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 NDUFA9Q16795 377 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 PRICKLE4Q2TBC4 344 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 PRAMEF8Q5VWM4 474 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 PRAMEF7Q5VXH5 474 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 PGBD2Q6P3X8 592 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 PODNL1Q6PEZ8 512 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 FIGNL1Q6PIW4 674 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 DGAT2L6Q6ZPD8 337 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 C11orf74Q86VG3 221 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 LSRQ86X29 649 aaPredicted RBP8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 MEX3DQ86XN8 651 aaKnown RBP8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 PEX5LQ8IYB4 626 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 DEPDC4Q8N2C3 294 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 CLIP4Q8N3C7 705 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 DNAJC22Q8N4W6 341 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 OR4K5Q8NGD3 323 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 ANKRD9Q96BM1 317 aaPredicted RBP8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 UCK2Q9BZX2 261 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 POLR2J3Q9H1A7 115 aaKnown RBP8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 PDE7BQ9NP56 450 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 MGAT4BQ9UQ53 548 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 RNF215Q9Y6U7 377 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 MUC3AQ02505 3323 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 CENPVL1A0A0U1RR11 272 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 SH3PXD2BA1X283 911 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 HYKKA2RU49 373 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 TLCD2A6NGC4 264 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 K7ESF4 209 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 SEC14L2O76054 403 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 ATE1O95260 518 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 OXSR1O95747 527 aaPredicted RBP8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 AGR2O95994 175 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 CCNYL3P0C7X3 344 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 RNH1P13489 461 aaKnown RBP8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 JUNBP17275 347 aaPredicted RBP8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 TNNI3P19429 210 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 PCMT1P22061 227 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 PSMB9P28065 219 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 CNR2P34972 360 aa8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 ROR2Q01974 943 aaKnown RBP8.48□□□□□ -1.05
RAB3IP-218ENST00000553099 PRTGQ2VWP7 1150 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms