RNA–Protein interactions for RNA: ENST00000541099.5

TRIT1-215, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene TRIT1, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-215ENST00000541099 MFSD12Q6NUT3 480 aa10.74□□□□□ -0.69
TRIT1-215ENST00000541099 ACAD11Q709F0 780 aa10.74□□□□□ -0.69
TRIT1-215ENST00000541099 CHERPQ8IWX8 916 aaKnown RBP10.74□□□□□ -0.69
TRIT1-215ENST00000541099 TAGAPQ8N103 731 aa10.74□□□□□ -0.69
TRIT1-215ENST00000541099 SLC34A3Q8N130 599 aa10.74□□□□□ -0.69
TRIT1-215ENST00000541099 GOLM1Q8NBJ4 401 aa10.74□□□□□ -0.69
TRIT1-215ENST00000541099 SLC16A11Q8NCK7 471 aa10.74□□□□□ -0.69
TRIT1-215ENST00000541099 OR5AK3PQ8NH89 298 aa10.74□□□□□ -0.69
TRIT1-215ENST00000541099 ZFP28Q8NHY6 868 aa10.74□□□□□ -0.69
TRIT1-215ENST00000541099 SPPL2AQ8TCT8 520 aa10.74□□□□□ -0.69
TRIT1-215ENST00000541099 RNF138Q8WVD3 245 aa10.74□□□□□ -0.69
TRIT1-215ENST00000541099 FAR1Q8WVX9 515 aa10.74□□□□□ -0.69
TRIT1-215ENST00000541099 STON2Q8WXE9 905 aa10.74□□□□□ -0.69
TRIT1-215ENST00000541099 PIK3R3Q92569 461 aa10.74□□□□□ -0.69
TRIT1-215ENST00000541099 HSPBAP1Q96EW2 488 aa10.74□□□□□ -0.69
TRIT1-215ENST00000541099 SGCZQ96LD1 299 aa10.74□□□□□ -0.69
TRIT1-215ENST00000541099 C5orf34Q96MH7 638 aa10.74□□□□□ -0.69
TRIT1-215ENST00000541099 PRPF18Q99633 342 aaKnown RBP10.74□□□□□ -0.69
TRIT1-215ENST00000541099 SLX1AQ9BQ83 275 aa10.74□□□□□ -0.69
TRIT1-215ENST00000541099 RTN4RQ9BZR6 473 aa10.74□□□□□ -0.69
TRIT1-215ENST00000541099 ATAD3AQ9NVI7 634 aa10.74□□□□□ -0.69
TRIT1-215ENST00000541099 FBXO34Q9NWN3 711 aa10.74□□□□□ -0.69
TRIT1-215ENST00000541099 FAM53CQ9NYF3 392 aa10.74□□□□□ -0.69
TRIT1-215ENST00000541099 TAS2R9Q9NYW1 312 aa10.74□□□□□ -0.69
TRIT1-215ENST00000541099 PRSS51A0A1B0GVH4 220 aa10.73□□□□□ -0.69
TRIT1-215ENST00000541099 LRRC3CA6NJW4 275 aa10.73□□□□□ -0.69
TRIT1-215ENST00000541099 ACOX3O15254 700 aa10.73□□□□□ -0.69
TRIT1-215ENST00000541099 POLR3GO15318 223 aaPredicted RBP10.73□□□□□ -0.69
TRIT1-215ENST00000541099 COQ9O75208 318 aa10.73□□□□□ -0.69
TRIT1-215ENST00000541099 SLC22A3O75751 556 aa10.73□□□□□ -0.69
TRIT1-215ENST00000541099 GLSO94925 669 aaPredicted RBP10.73□□□□□ -0.69
TRIT1-215ENST00000541099 NKX2-2O95096 273 aa10.73□□□□□ -0.69
TRIT1-215ENST00000541099 CBX6O95503 412 aa10.73□□□□□ -0.69
TRIT1-215ENST00000541099 CPSF4O95639 269 aaKnown RBP10.73□□□□□ -0.69
TRIT1-215ENST00000541099 HMGN2P05204 90 aaKnown RBP10.73□□□□□ -0.69
TRIT1-215ENST00000541099 PGRP06401 933 aa10.73□□□□□ -0.69
TRIT1-215ENST00000541099 PTPN6P29350 595 aa10.73□□□□□ -0.69
TRIT1-215ENST00000541099 S100A3P33764 101 aa10.73□□□□□ -0.69
TRIT1-215ENST00000541099 GABRA3P34903 492 aa10.73□□□□□ -0.69
TRIT1-215ENST00000541099 CCT3P49368 545 aaKnown RBP10.73□□□□□ -0.69
TRIT1-215ENST00000541099 CLNS1AP54105 237 aaKnown RBP10.73□□□□□ -0.69
TRIT1-215ENST00000541099 CASP9P55211 416 aa10.73□□□□□ -0.69
TRIT1-215ENST00000541099 DCAF7P61962 342 aa10.73□□□□□ -0.69
TRIT1-215ENST00000541099 PLCXD2Q0VAA5 305 aa10.73□□□□□ -0.69
TRIT1-215ENST00000541099 MRPL49Q13405 166 aaKnown RBP10.73□□□□□ -0.69
TRIT1-215ENST00000541099 LASP1Q14847 261 aaKnown RBP10.73□□□□□ -0.69
TRIT1-215ENST00000541099 RPS6KA2Q15349 733 aa10.73□□□□□ -0.69
TRIT1-215ENST00000541099 INAQ16352 499 aa10.73□□□□□ -0.69
TRIT1-215ENST00000541099 GTDC1Q4AE62 458 aa10.73□□□□□ -0.69
TRIT1-215ENST00000541099 GALNT10Q86SR1 603 aa10.73□□□□□ -0.69
TRIT1-215ENST00000541099 FBXW8Q8N3Y1 598 aa10.73□□□□□ -0.69
TRIT1-215ENST00000541099 BCORP1Q8N888 145 aa10.73□□□□□ -0.69
TRIT1-215ENST00000541099 ZFP62Q8NB50 900 aaPredicted RBP10.73□□□□□ -0.69
TRIT1-215ENST00000541099 TMEM178AQ8NBL3 297 aa10.73□□□□□ -0.69
TRIT1-215ENST00000541099 FAM13CQ8NE31 585 aa10.73□□□□□ -0.69
TRIT1-215ENST00000541099 OR2M7Q8NG81 312 aa10.73□□□□□ -0.69
TRIT1-215ENST00000541099 GOT1L1Q8NHS2 421 aaPredicted RBP10.73□□□□□ -0.69
TRIT1-215ENST00000541099 NR4A3Q92570 626 aa10.73□□□□□ -0.69
TRIT1-215ENST00000541099 TMEM125Q96AQ2 219 aa10.73□□□□□ -0.69
TRIT1-215ENST00000541099 VPS33AQ96AX1 596 aa10.73□□□□□ -0.69
TRIT1-215ENST00000541099 EFHD2Q96C19 240 aaPredicted RBP10.73□□□□□ -0.69
TRIT1-215ENST00000541099 SLC35A4Q96G79 324 aa10.73□□□□□ -0.69
TRIT1-215ENST00000541099 CCDC115Q96NT0 180 aa10.73□□□□□ -0.69
TRIT1-215ENST00000541099 TMEM120AQ9BXJ8 343 aa10.73□□□□□ -0.69
TRIT1-215ENST00000541099 TSPAN10Q9H1Z9 355 aaPredicted RBP10.73□□□□□ -0.69
TRIT1-215ENST00000541099 TIMMDC1Q9NPL8 285 aa10.73□□□□□ -0.69
TRIT1-215ENST00000541099 ZCCHC3Q9NUD5 404 aaKnown RBP10.73□□□□□ -0.69
TRIT1-215ENST00000541099 TUBA8Q9NY65 449 aaPredicted RBP10.73□□□□□ -0.69
TRIT1-215ENST00000541099 BTNL2Q9UIR0 455 aa10.73□□□□□ -0.69
TRIT1-215ENST00000541099 KLF13Q9Y2Y9 288 aaPredicted RBP10.73□□□□□ -0.69
TRIT1-215ENST00000541099 SNX8Q9Y5X2 465 aa10.73□□□□□ -0.69
TRIT1-215ENST00000541099 EML6Q6ZMW3 1958 aa10.73□□□□□ -0.69
TRIT1-215ENST00000541099 A0A0G2JND7 137 aa10.72□□□□□ -0.69
TRIT1-215ENST00000541099 PRAMEF27A3QJZ7 478 aa10.72□□□□□ -0.69
TRIT1-215ENST00000541099 TRIM3O75382 744 aaPredicted RBP10.72□□□□□ -0.69
TRIT1-215ENST00000541099 ZIC2O95409 532 aaPredicted RBP10.72□□□□□ -0.69
TRIT1-215ENST00000541099 GSNP06396 782 aa10.72□□□□□ -0.69
TRIT1-215ENST00000541099 VIMP08670 466 aaKnown RBP10.72□□□□□ -0.69
TRIT1-215ENST00000541099 RFPL3SP0C7P2 107 aa10.72□□□□□ -0.69
TRIT1-215ENST00000541099 CYP4B1P13584 511 aa10.72□□□□□ -0.69
TRIT1-215ENST00000541099 NAGAP17050 411 aa10.72□□□□□ -0.69
TRIT1-215ENST00000541099 HOXB9P17482 250 aaPredicted RBP10.72□□□□□ -0.69
TRIT1-215ENST00000541099 CAPN3P20807 821 aa10.72□□□□□ -0.69
TRIT1-215ENST00000541099 CNR1P21554 472 aa10.72□□□□□ -0.69
TRIT1-215ENST00000541099 GNLYP22749 145 aa10.72□□□□□ -0.69
TRIT1-215ENST00000541099 CASP3P42574 277 aa10.72□□□□□ -0.69
TRIT1-215ENST00000541099 POLR2JP52435 117 aaKnown RBP10.72□□□□□ -0.69
TRIT1-215ENST00000541099 GAS1P54826 345 aa10.72□□□□□ -0.69
TRIT1-215ENST00000541099 RPS26P62854 115 aaKnown RBP10.72□□□□□ -0.69
TRIT1-215ENST00000541099 SRSF1Q07955 248 aaKnown RBP eCLIP10.72□□□□□ -0.696e-7■■■■□ 20.1
TRIT1-215ENST00000541099 ANXA8L1Q5VT79 327 aa10.72□□□□□ -0.69
TRIT1-215ENST00000541099 SLC22A10Q63ZE4 541 aa10.72□□□□□ -0.69
TRIT1-215ENST00000541099 OLIG3Q7RTU3 272 aa10.72□□□□□ -0.69
TRIT1-215ENST00000541099 SZRD1Q7Z422 152 aa10.72□□□□□ -0.69
TRIT1-215ENST00000541099 FGD2Q7Z6J4 655 aa10.72□□□□□ -0.69
TRIT1-215ENST00000541099 MIER2Q8N344 545 aa10.72□□□□□ -0.69
TRIT1-215ENST00000541099 NATD1Q8N6N6 113 aa10.72□□□□□ -0.69
TRIT1-215ENST00000541099 HORMAD2Q8N7B1 307 aa10.72□□□□□ -0.69
TRIT1-215ENST00000541099 OR52N2Q8NGI0 321 aa10.72□□□□□ -0.69
TRIT1-215ENST00000541099 OR4A15Q8NGL6 344 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms