RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 GCH1P30793 250 aa15.94■□□□□ 0.14
SCARB1-205ENST00000538291 MAP2K4P45985 399 aa15.94■□□□□ 0.14
SCARB1-205ENST00000538291 PITPNBP48739 271 aa15.94■□□□□ 0.14
SCARB1-205ENST00000538291 EPHA4P54764 986 aa15.94■□□□□ 0.14
SCARB1-205ENST00000538291 ARL6IP1Q15041 203 aa15.94■□□□□ 0.14
SCARB1-205ENST00000538291 LCTLQ6UWM7 567 aa15.94■□□□□ 0.14
SCARB1-205ENST00000538291 RANBP10Q6VN20 620 aa15.94■□□□□ 0.14
SCARB1-205ENST00000538291 ASB12Q8WXK4 309 aa15.94■□□□□ 0.14
SCARB1-205ENST00000538291 REV1Q9UBZ9 1251 aa15.94■□□□□ 0.14
SCARB1-205ENST00000538291 KCPQ6ZWJ8 1503 aa15.94■□□□□ 0.14
SCARB1-205ENST00000538291 CD8B2A6NJW9 211 aa15.94■□□□□ 0.14
SCARB1-205ENST00000538291 MAS1P04201 325 aa15.94■□□□□ 0.14
SCARB1-205ENST00000538291 CD8BP10966 210 aa15.94■□□□□ 0.14
SCARB1-205ENST00000538291 PRPS1P60891 318 aa15.94■□□□□ 0.14
SCARB1-205ENST00000538291 C18orf21Q32NC0 220 aaPredicted RBP15.94■□□□□ 0.14
SCARB1-205ENST00000538291 ENPP6Q6UWR7 440 aa15.94■□□□□ 0.14
SCARB1-205ENST00000538291 OR9K2Q8NGE7 335 aa15.94■□□□□ 0.14
SCARB1-205ENST00000538291 MCTS1Q9ULC4 181 aaKnown RBP15.94■□□□□ 0.14
SCARB1-205ENST00000538291 LTN1O94822 1766 aa15.94■□□□□ 0.14
SCARB1-205ENST00000538291 AGAP5A6NIR3 686 aa15.94■□□□□ 0.14
SCARB1-205ENST00000538291 A6NL46 340 aa15.94■□□□□ 0.14
SCARB1-205ENST00000538291 ZNF182P17025 639 aaPredicted RBP15.94■□□□□ 0.14
SCARB1-205ENST00000538291 TMBIM6P55061 237 aa15.94■□□□□ 0.14
SCARB1-205ENST00000538291 PSPHP78330 225 aa15.94■□□□□ 0.14
SCARB1-205ENST00000538291 APOFQ13790 326 aa15.94■□□□□ 0.14
SCARB1-205ENST00000538291 C22orf42Q6IC83 251 aa15.94■□□□□ 0.14
SCARB1-205ENST00000538291 PPP1R35Q8TAP8 253 aa15.94■□□□□ 0.14
SCARB1-205ENST00000538291 ARL5BQ96KC2 179 aa15.94■□□□□ 0.14
SCARB1-205ENST00000538291 MEPEQ9NQ76 525 aaPredicted RBP15.94■□□□□ 0.14
SCARB1-205ENST00000538291 GJD2Q9UKL4 321 aa15.94■□□□□ 0.14
SCARB1-205ENST00000538291 MBLAC1A4D2B0 266 aaPredicted RBP15.94■□□□□ 0.14
SCARB1-205ENST00000538291 CER1O95813 267 aa15.94■□□□□ 0.14
SCARB1-205ENST00000538291 ZNF888P0CJ79 500 aaPredicted RBP15.94■□□□□ 0.14
SCARB1-205ENST00000538291 PNMTP11086 282 aa15.94■□□□□ 0.14
SCARB1-205ENST00000538291 GJA8P48165 433 aa15.94■□□□□ 0.14
SCARB1-205ENST00000538291 SCD5Q86SK9 330 aa15.94■□□□□ 0.14
SCARB1-205ENST00000538291 TMEM173Q86WV6 379 aaPredicted RBP15.94■□□□□ 0.14
SCARB1-205ENST00000538291 GOLM1Q8NBJ4 401 aa15.94■□□□□ 0.14
SCARB1-205ENST00000538291 NAT6Q93015 286 aa15.94■□□□□ 0.14
SCARB1-205ENST00000538291 RAB9BQ9NP90 201 aa15.94■□□□□ 0.14
SCARB1-205ENST00000538291 OR52A4PA6NMU1 304 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 RP2O75695 350 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 NDUFB2O95178 105 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 CNOT4O95628 575 aaKnown RBP15.93■□□□□ 0.14
SCARB1-205ENST00000538291 APLNRP35414 380 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 ERVPABLB-1P60509 514 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 ISCA2Q86U28 154 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 CPXM2Q8N436 756 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 RRNAD1Q96FB5 475 aaKnown RBP15.93■□□□□ 0.14
SCARB1-205ENST00000538291 OR5B2Q96R09 309 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 SACM1LQ9NTJ5 587 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 IL17CQ9P0M4 197 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 HSPB11Q9Y547 144 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 ISPDA4D126 451 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 M0R233 179 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 MEN1O00255 615 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 LCATP04180 440 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 TAP2Q03519 686 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 TMEM201Q5SNT2 666 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 C1orf220Q5T0J3 134 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 PLBD1Q6P4A8 553 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 TANKQ92844 425 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 FGF13Q92913 245 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 ISG20Q96AZ6 181 aaKnown RBP15.93■□□□□ 0.14
SCARB1-205ENST00000538291 SPO11Q9Y5K1 396 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 XRN1Q8IZH2 1706 aaKnown RBP15.93■□□□□ 0.14
SCARB1-205ENST00000538291 LOC102723532A0A0G2JNH3 316 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 EFCAB7A8K855 629 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 PCDH17O14917 1159 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 PRSS56P0CW18 603 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 CRABP1P29762 137 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 HOXC13P31276 330 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 AKR1C2P52895 323 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 ART1P52961 327 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 PGGT1BP53609 377 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 CDHR3Q6ZTQ4 885 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 APIPQ96GX9 242 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 ABRACLQ9P1F3 81 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 A6NIZ1 184 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 RDH16O75452 317 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 MTNR1AP48039 350 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 RAP1BP61224 184 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 RAP1AP62834 184 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 SH3BP2P78314 561 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 XKR5Q6UX68 686 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 PHOX2BQ99453 314 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 RABL2AQ9UBK7 228 aaPredicted RBP15.93■□□□□ 0.14
SCARB1-205ENST00000538291 RABL2BQ9UNT1 228 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 A0A0A6YYC8 382 aaPredicted RBP15.93■□□□□ 0.14
SCARB1-205ENST00000538291 B8ZZF3 427 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 I3L1I5 382 aaPredicted RBP15.93■□□□□ 0.14
SCARB1-205ENST00000538291 MPPED1O15442 326 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 STSP08842 583 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 GGT1P19440 569 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 CLDN2P57739 230 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 TUBB3Q13509 450 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 RNASE10Q5GAN6 216 aaKnown RBP15.93■□□□□ 0.14
SCARB1-205ENST00000538291 TP53INP2Q8IXH6 220 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 LRRC15Q8TF66 581 aa15.93■□□□□ 0.14
SCARB1-205ENST00000538291 ACTR6Q9GZN1 396 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms